Os04g0536300

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0536300| Description = Similar to Yabby15 protein (Fragment)| Version = NM_001059958.1 GI:115459645 GeneID:4336518| Length = 2559 bp| Defi...")
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Gene Name

Os04g0536300

Description

Similar to Yabby15 protein (Fragment)

Version

NM_001059958.1 GI:115459645 GeneID:4336518

Length

2559 bp

Definition

Oryza sativa Japonica Group Os04g0536300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27104144..27106702

Sequence Coding Region

27104286..27104417,27104540..27104713,27104795..27104984,27105688..27105736,27105851..27105926
,27106050..27106124,27106241..27106345

Expression

GEO Profiles:Os04g0536300

Genome Context

<gbrowseImage1> name=NC_008397:27104144..27106702 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27104144..27106702 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtcgtcggcgccggagacgttctcgctggaccacctctcgcagcatcagcagcagcagccgccgccgctcgccgagcaggagcagctctgctacgtgcactgcaacttctgcgacaccatcctcgcggtgggcgtgccgtgtagcagcctgttcaagacggtcaccgtgcggtgcggccactgcgccaacctgctctccgtcaacctccgcggcctcctgctcccggccgccgcctccaccgccaaccagctccccttcggccaggctctcctctcccccacctcaccgcacggcctccttgatgaggtgccgtcattccaagcgccggcgagcctaatgaccgaacaggcgagtcccaacgtgagcagcatcacgagcagcaacagcagctgtgctaacaacgcgccggcgacgtcgatggcgtcggcggccaacaaggctacccagcgagagccgcagcagccgaagaacgcgccgtcagccaacaggacttcagagaagcggcagagggttccctcggcatacaaccgattcatcaaagatgagatacaacgcatcaaggcaagcaatccggacatcacccacagggaggctttcagcgctgctgccaagaactgggcccatttcccacacatccattttggcctgatgccggaccagggcctgaagaagaccggcatacaaagccaggacggagctggggaatgcatgctcttcaaggacggtctctacgctgcagccgccgccgctgcagcagccacagcagcatctagcatgggtgtcactccattctaa</cdnaseq>

Protein Sequence

<aaseq>MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILA VGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLL DEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNA PSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGL MPDQGLKKTGIQSQDGAGECMLFKDGLYAAAAAAAAATAASSMGVTPF</aaseq>

Gene Sequence

<dnaseqindica>143..274#397..570#652..841#1545..1593#1708..1783#1907..1981#2098..2202#atccgctagcttcatctccactagtctcatccctccttctccctctcctcgttgaacaccgcactatcaaatcacccagctgaaagccaagaccgcgcgcgccggccggccgggcagggatcacctagctaggatacgcgccatgatgtcgtcggcgccggagacgttctcgctggaccacctctcgcagcatcagcagcagcagccgccgccgctcgccgagcaggagcagctctgctacgtgcactgcaacttctgcgacaccatcctcgcggtacgtacatgcgcgcttgttccctcgccgggcgccgttgatctgtccggccgtaatagctaactatagctccggactccggtacgtcccttgaataaagcctcgttccgttgcatttgcaggtgggcgtgccgtgtagcagcctgttcaagacggtcaccgtgcggtgcggccactgcgccaacctgctctccgtcaacctccgcggcctcctgctcccggccgccgcctccaccgccaaccagctccccttcggccaggctctcctctcccccacctcaccgcacggcctccttgtacgtaacaacgatctatttctacttagtttttgctcactgcgccggccggccggatgcttaatcattttcggcttgcaggatgaggtgccgtcattccaagcgccggcgagcctaatgaccgaacaggcgagtcccaacgtgagcagcatcacgagcagcaacagcagctgtgctaacaacgcgccggcgacgtcgatggcgtcggcggccaacaaggctacccagcgagagccgcagcagccgaagaacgcgccgtcagccaacaggagtaagtgcctcacttctcccacattccttcgccttctcctcctcgatcctccggcaacgctgtgtatagctaggagagaactccagaagctggctatagatagctgcgtgcgcgtgcgctgcagtagcacacactgttcttggtggcacgaatacagcatgctcctctttgagcttctccttttgagagttcttttcgatggtcaatgaagttttcgaacaagtggaagggggtcgaatagttttcacatcagctcaatagtgccttttgtccgtggaggaattcttcccaaatcccgacgttaattatgcacagtgcaaagataggtaagatcacttgagtcttgacaaaacaaaaaatcaataaaaaaataggaagaggggttaaggaaaagggaacagaacacgtacagatcaaatggaaaactattctaaactccagatcgaatactgcttcaaacagacagaacgtaacgtggcaaccagtccctaatttgttctgtgagctcacagggagcaacattaatggtcaggttgcacatgcgaactaataatgtacatatggtctttcaactgatctagccttgttgcgtccgtgctgcttcggtctttgaactgcagcagtgctgcagtagtgtcatcaaagtacgctgttattctgttaaccaagtaattatgttcggctcattgttgtgattctgcagcttcagagaagcggcagagggttccctcggcatacaaccgattcatcaagtgagtaatcatcgataatggttcacatcgtttaattttggtttcctcttttaattacatcatctgacaaaaactactcgtgcttcactccgtttatgacacgtataatatcagagatgagatacaacgcatcaaggcaagcaatccggacatcacccacagggaggctttcagcgctgctgccaagaacgtacaaaatctccccgtttaatttcttgataaaaaaaacatgcatgtgatgtgtgcagcatactccactgtatatataaaccaaattcgtatttactctgtctcatctttgtgcatgcaccagtgggcccatttcccacacatccattttggcctgatgccggaccagggcctgaagaagaccggcatacaaagccaggtaaagagtaaagacggaccctaaaatctaaaccctaattctattggtggagaatcgatgtcaatggatgaatataaaaccgagacttaattatagtattttttgtgcttttataggacggagctggggaatgcatgctcttcaaggacggtctctacgctgcagccgccgccgctgcagcagccacagcagcatctagcatgggtgtcactccattctaacgcctcagatcaatgcacgatctggcttaaaaaaaactttgtgtcccaccctgtagttagggtcctgcatgtctcgatctccagatatgatctccggttgcttgttaactgaaatgttcctctatatatggacgatcatggcaccatatgcatggcatcttggcatgcatcgatcgtatctaagtccttatctatgtgtaattctagttttctcagtttcttcatgtattttccccttaatttttcctattcctattcgcctgtacagaggctgctagctgtgcgtgctgcctcttatatatcttatggacataactagatcgatttggtttaattaccaggtgatcatttgaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0536300, RefSeq:Os04g0536300