Os10g0122600

From RiceWiki
Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0122600| Description = Cellular retinaldehyde binding/alpha-tocopherol transport family protein| Version = NM_001070603.2 GI:297610047 GeneI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0122600

Description

Cellular retinaldehyde binding/alpha-tocopherol transport family protein

Version

NM_001070603.2 GI:297610047 GeneID:4348005

Length

3785 bp

Definition

Oryza sativa Japonica Group Os10g0122600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1426573..1430357

Sequence Coding Region

1426573..1426590,1426838..1426912,1427106..1427464,1427551..1427656,1428091..1428207
,1428319..1428420,1428520..1428613,1428697..1428746,1428833..1428934
,1429029..1429106,1429189..1429455,1429573..1429672,1429757..1430039
,1430312..1430357

Expression

GEO Profiles:Os10g0122600

Genome Context

<gbrowseImage1> name=NC_008403:1426573..1430357 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1426573..1430357 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacagaagtcctgtcgagaccgctcgaacaccgtctaagctctgcaaccttagacggtcactatgaagagaagaggaaatccaatgttgaatactcagaggatgagaagaaagccaaaatcatgtcactgaagaagaaggcaatgagttcttcacaaaaattaaggcattcaatgaagaaggggaggaggagtagcaaggtcatgtccatctcaattgccgatgaacgtgatcctgaagaggtgcaggctgtagatgccttccgtcagctccttatacttgaagagttgctaccatctcagcatgatgattaccacatgatgctaaggtttttgaaggcaagaaagtttgatgttgagaaggcaaagcaaatgtgggctgacatgttgcggtggagaaaggaatttggtgcagataccattcttgaggattttgaatttgaagaagctggcaaggtggcagaatgctatcctcaaggttatcatggggttgataaggaaggaaggcctgtctacattgaacgacttggacagatcgatgtcaataggctaatgcaggtcaccacaatggatcgttttatcaagaaccatgttagggagtttgagaagaactttgctgttaagttcccagcttgctcaattgctaccaagtgccacattgatcagagcacaacaattcttgatgtgcaaggggtggggatgaaacaattcagcaaagctgcaagagaccttattggtcagcttcaaaagattgatggtgataactaccctgagacactgtgtcgaatgttcatcattaatgctgggccgggattccgacttctttggagcacagtgaagagtttccttgacccaaagaccacagcaaagattcatgtgttgggcaacaagtaccagagcaagcttcttgaggtgattgatgctagtgagctgccggagttttttggtggaacttgccaatgtgaaggtggttgtatgaaggctgacaagggcccctggaaggatgatgaagtcatgaagatggttcaaagcggggttgggtggtgtggaaatctcaatttgaatcatctagaggctgaggagaaaatgatgatttgtgaagatgacaccatgtacaccaagaagcaggagtctttcaaagatgaagggcgcactttgtcaagaaaaatatctcgtgcccgaattgaacatcctacactgtcgcctgtttgtgaggaacttcctcctatgatgcttcctaccccaggatcaccttattcttgtgatgttccaatggtagagaaggccatagatgccatttgccagagtaagggatcacgagatgagaatgtcgcaataaccaaagccattgtaaatgcctctaacggatccaaccctccactctttgggggtgtcatggctcttgtcatgagcattgcaacaatgctccgtgttagccgcaacatgccaaagaaggtacttggtgctacccttggggcacaaagtacatccaaaatccaagcacaacagctatccaagatatcaatggaggctgtgtcagcagctgaatatgcttcttctacaaagcgcctatctgatatcgaggagaaggtcattgcgattctcaccaagcctgcagaaatgccagctgataaggaggagatgctaaagactgccgtcagccgtgttagtgcattggaggaggagcttgccgcgaccaagaaggccttgcaggagactcttgagcgacaagaggagatcatggcatacattgagaagaaaaagaagaagaaaagcaagcgtttgtttcgttggtaa</cdnaseq>

Protein Sequence

<aaseq>MTEVLSRPLEHRLSSATLDGHYEEKRKSNVEYSEDEKKAKIMSL KKKAMSSSQKLRHSMKKGRRSSKVMSISIADERDPEEVQAVDAFRQLLILEELLPSQH DDYHMMLRFLKARKFDVEKAKQMWADMLRWRKEFGADTILEDFEFEEAGKVAECYPQG YHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRFIKNHVREFEKNFAVKFPACSIATKC HIDQSTTILDVQGVGMKQFSKAARDLIGQLQKIDGDNYPETLCRMFIINAGPGFRLLW STVKSFLDPKTTAKIHVLGNKYQSKLLEVIDASELPEFFGGTCQCEGGCMKADKGPWK DDEVMKMVQSGVGWCGNLNLNHLEAEEKMMICEDDTMYTKKQESFKDEGRTLSRKISR ARIEHPTLSPVCEELPPMMLPTPGSPYSCDVPMVEKAIDAICQSKGSRDENVAITKAI VNASNGSNPPLFGGVMALVMSIATMLRVSRNMPKKVLGATLGAQSTSKIQAQQLSKIS MEAVSAAEYASSTKRLSDIEEKVIAILTKPAEMPADKEEMLKTAVSRVSALEEELAAT KKALQETLERQEEIMAYIEKKKKKKSKRLFRW</aaseq>

Gene Sequence

<dnaseqindica>3768..3785#3446..3520#2894..3252#2702..2807#2151..2267#1938..2039#1745..1838#1612..1661#1424..1525#1252..1329#903..1169#686..785#319..601#1..46#atgacagaagtcctgtcgagaccgctcgaacaccgtctaagctctggtaagtaaagcaaataatggtcacaaccatttcttattgtttaaagtggattattaagctctaatactatctttttttttattaaaaactcattatattcccttatgtctcaaagtataaacattattttcagatgaagtgtatgccttttccccaatgacattcttctacttcactatcacagaattaatttctaacttaactgttcagaaaatatttagaatttggtatattacaatatacatgactgactaacatacacgatgtgtcagcaaccttagacggtcactatgaagagaagaggaaatccaatgttgaatactcagaggatgagaagaaagccaaaatcatgtcactgaagaagaaggcaatgagttcttcacaaaaattaaggcattcaatgaagaaggggaggaggagtagcaaggtcatgtccatctcaattgccgatgaacgtgatcctgaagaggtgcaggctgtagatgccttccgtcagctccttatacttgaagagttgctaccatctcagcatgatgattaccacatgatgctaaggtgtataatctgaaaatagcacttcatgttgttatttagtttcaaatgtgaaaacaagtattactaaaattcgagattacacaggtttttgaaggcaagaaagtttgatgttgagaaggcaaagcaaatgtgggctgacatgttgcggtggagaaaggaatttggtgcagataccattcttgaggtaattgcatctatcaaataggttaaggttaaactatatttggactaatccttttatggttgatacatacctttgtttataagcagttgacacatttttcatcaaattctatctcaggattttgaatttgaagaagctggcaaggtggcagaatgctatcctcaaggttatcatggggttgataaggaaggaaggcctgtctacattgaacgacttggacagatcgatgtcaataggctaatgcaggtcaccacaatggatcgttttatcaagaaccatgttagggagtttgagaagaactttgctgttaagttcccagcttgctcaattgctaccaagtgccacattgatcagagcacaacaattcttgatgtgcaaggggtggtatgtatgtgcgatatttggataattcattaaattattgcacttttactatttataatctaagagaaaaatgcatttttaggggatgaaacaattcagcaaagctgcaagagaccttattggtcagcttcaaaagattgatggtgataactaccctgaggtaatgccctcaatgtaaaatatattggttgtaattctgcaaaaatttgtactagatttattaatattcttacttcatgtaattgtttgcctagacactgtgtcgaatgttcatcattaatgctgggccgggattccgacttctttggagcacagtgaagagtttccttgacccaaagaccacagcaaagattcatgttagtgttcttccaatacattgtctaggagtgctcaacttgaagattgattattgataatctgtgacttctgtgcatttctttaggtgttgggcaacaagtaccagagcaagcttcttgaggtgattgatgctaggtagaacacccgatgctctaagttaaccatcatatttgaagacaatgttcaccattttaatgttattaatttccgttgtccagtgagctgccggagttttttggtggaacttgccaatgtgaaggtggttgtatgaaggctgacaagggcccctggaaggatgatgaagtcatgaaggtgactgctccaatctgatcctttatccttgaacaaattcttaaattacagttgataagggaaaaggaactcaaaatttctatgctatattatgtttagatggttcaaagcggggttgggtggtgtggaaatctcaatttgaatcatctagaggctgaggagaaaatgatgatttgtgaagatgacaccatgtacaccaaggtagcaaagatattacccgctctttgcagtaacacattcatatttaagtatttctaaatgcattggatcataatacttagacatctgttattttatttgtgtaaaataaagaagcaggagtctttcaaagatgaagggcgcactttgtcaagaaaaatatctcgtgcccgaattgaacatcctacactgtcgcctgtttgtgaggaacttcctcctatgatgcttcctgtgagttacgctttatctccgatgaatttccactattgttctagaaaaagaaatgccactattgtcctactaacaatgacatctttgtactttaacaaatttgtagtgttttttctttgcgcaaacaaaattgtagttagtgttgaaccatacggctaaaaggatttctcatgccttgtggatgaaacaccagaatgaaaaaaaatgagtcttaacttataagcttaagcgggttcgtcacttgataatgcagttgataagcacgaacaagtaacttcatgatgatatttcatttccagggaaactgtaaaacctcaatttttcccaagattagtcatcatataaattttcattcttgtggtgtattggttcacatatttcttttataaattcctaagcttagtcctaatatagaaggagtttttgtaatgcagaccccaggatcaccttattcttgtgatgttccaatggtagagaaggccatagatgccatttgccagagtaagggatcacgagatgagaatgtcgcaataaccaaaggttaaccattaaacaatcttgtgacctaatattattactcttttgttagtctttaactgacagattggacaatccttttcttgtagccattgtaaatgcctctaacggatccaaccctccactctttgggggtgtcatggctcttgtcatgagcattgcaacaatgctccgtgttagccgcaacatgccaaagaaggtacttggtgctacccttggggcacaaagtacatccaaaatccaagcacaacagctatccaagatatcaatggaggctgtgtcagcagctgaatatgcttcttctacaaagcgcctatctgatatcgaggagaaggtcattgcgattctcaccaagcctgcagaaatgccagctgataaggaggagatgctaaagactgccgtcagccgtgttagtgcattggaggaggagcttgccgcgaccaagaaggtgagtttgtttgcaccttactgatgataagaacattattattacattaccaaagtttatgttttaattcctgtgtatacatcttaatcccatagatcggtattattaaatgtgttgagactaacaaattatatgttgttctactattcttactaaaccatttctaaaacacgcctgttatatgttcttttaggccttgcaggagactcttgagcgacaagaggagatcatggcatacattgagaagaaaaagaagaagaaaagcaaggtaacccaaaaaaagggaaagtaaaaggcatccttttgctgtagtattgttgtgacccttaattactaaacatttttccccttgtcactgacccatgcactaaaatatacgagatttccaccaaataatttgtgttgcttgttctctttatgaactcatctactaaatatttatgctcaaaaaaagttttcccttcctattctttgatttcataaagttaacattgccactgaaatttcacttgcagcgtttgtttcgttggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0122600, RefSeq:Os10g0122600