Os04g0539500

From RiceWiki
Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0539500| Description = The start codon is not identified.| Version = NM_001059972.2 GI:297603092 GeneID:4336532| Length = 1944 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0539500

Description

The start codon is not identified.

Version

NM_001059972.2 GI:297603092 GeneID:4336532

Length

1944 bp

Definition

Oryza sativa Japonica Group Os04g0539500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27399346..27401289

Sequence Coding Region

27400384..27400980

Expression

GEO Profiles:Os04g0539500

Genome Context

<gbrowseImage1> name=NC_008397:27399346..27401289 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27399346..27401289 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggcgaaacgcagcaagcgctctcgggccacggcgtggtctctctcgggggcaccgcctttctcggactccacgtcatcctcgtccacaaccaccacctcctcgtgctcctcgtcggcttcgttctcgtcgttctcgccgctcctcaagtttgagtggcacccgctcggcggcacgtcggacctcccggacgatcaccttctgccgccgggggaagaagtccaagcacggtaagaacggcaagaacaagcctaagaagcgtggccgcaagccgaagcagctcccaccacatccctcgggcgcggcggcgtcggcccccgcgccgggcgaccggcgctgtagccactgcggcgtgcagaagaccccgcagtggcgcgcggggccggagggcgccaagacgctctgcaacgcgtgcggcgtccgctacaagtccggccggctcctccccgagtaccgcccggcgtgcagccccaccttcgtgagcgccatccactccaactcccaccgcaaggtgctcgagatgaggcgcaagaaggaggtcggctccggactcctcaccgccgccgccgccgcagcgcccgccgtggcgtcgttctag</cdnaseq>

Protein Sequence

<aaseq>RRNAASALGPRRGLSRGHRLSRTPRHPRPQPPPPRAPRRLRSRR SRRSSSLSGTRSAARRTSRTITFCRRGKKSKHGKNGKNKPKKRGRKPKQLPPHPSGAA ASAPAPGDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFV SAIHSNSHRKVLEMRRKKEVGSGLLTAAAAAAPAVASF</aaseq>

Gene Sequence

<dnaseqindica>1039..1635#aatgctccaccaaacgctcatcccttcttccaccctttccttcccctcctccgccccccctctcgcctcctctcctcttcgcctcaaaagccgccgccaccgccgcccagggttccaacacctcccgctcctcctcagccatgccgtcctacgcgcaccaccacagttctctggtaaggaagggagcgttagcctcaggagacgataagaaaacgactcttttataattctttgatgggattttttatgggaagggggatgacgaggaggagaacgggcgtttcttgagcctgtgtttgcttggtttctggaattttgggaatttatggtttttgctgtgtgtgtatgtgggtgccttttggacggagaaggatgggaagatggacgcgctgaaaagtagttgccggtcggaggaggcggccgacgagggggcggccgcggcgccgtcggcgtgggggatggttgagagggacgggttctccgtcgaggacctgctcgacctcgaggagttctgcgaggcggaaaaggacgccgccgaggagaacgagcaggcgctggccctcgtcgccgcgccagaggaggaaaagtcgaaggacgactcccagccgtcgtccgtcgtaacgtacgagcttgtggcgcccccgccgccgcctccggagattgttgacctgccggtgaggtttctcgagactctcgttgaccgtgcctttcggcggaaaggctgcggctttcgcgatggttgtcttttttttccccctgtaattaatttcttgctgtgctgtatggtttctctgcaggcgcatgacgtcgaggagctagagtgggtgtcgcgtatcatggacgactccctttccgagttgcccccgccgccgcagcctcctgcgtccgtcgtggcgtcgctggccgcgcggccgccgcagcctcggcagctgcagcggcggcctcaggacggagcttaccgcgcgctgccacccgcgtcctatccggtgcggactccgaccatctgcgcgctgtcaacggaggcgctggtgccggtgaaggcgaaacgcagcaagcgctctcgggccacggcgtggtctctctcgggggcaccgcctttctcggactccacgtcatcctcgtccacaaccaccacctcctcgtgctcctcgtcggcttcgttctcgtcgttctcgccgctcctcaagtttgagtggcacccgctcggcggcacgtcggacctcccggacgatcaccttctgccgccgggggaagaagtccaagcacggtaagaacggcaagaacaagcctaagaagcgtggccgcaagccgaagcagctcccaccacatccctcgggcgcggcggcgtcggcccccgcgccgggcgaccggcgctgtagccactgcggcgtgcagaagaccccgcagtggcgcgcggggccggagggcgccaagacgctctgcaacgcgtgcggcgtccgctacaagtccggccggctcctccccgagtaccgcccggcgtgcagccccaccttcgtgagcgccatccactccaactcccaccgcaaggtgctcgagatgaggcgcaagaaggaggtcggctccggactcctcaccgccgccgccgccgcagcgcccgccgtggcgtcgttctagctaaagcaagctagccaccccgcgcgcccccgcggtggctgtacatttttccagccgtattagtcctgtaccgtacctggatttttttcccctttcttttccagtattatcttagttccggttggattaattagagttaggtgcctttaggtcatgttaggtctaggaattcagctttccggtgctccagctcaaaagcttttactatagtttgttagggcactgctgctgtagcagcagtgcagccgcggcagcgctagcgcagaacttcatttccattctagcttacccgaaggagttttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0539500, RefSeq:Os04g0539500