Os04g0540300

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0540300| Description = Phytochelatin synthetase-like conserved region family protein| Version = NM_001059975.1 GI:115459679 GeneID:4336536| ...")
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Gene Name

Os04g0540300

Description

Phytochelatin synthetase-like conserved region family protein

Version

NM_001059975.1 GI:115459679 GeneID:4336536

Length

2005 bp

Definition

Oryza sativa Japonica Group Os04g0540300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27431366..27433370

Sequence Coding Region

27431366..27431426,27431568..27431644,27431919..27432346,27432735..27433003,27433087..27433370

Expression

GEO Profiles:Os04g0540300

Genome Context

<gbrowseImage1> name=NC_008397:27431366..27433370 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27431366..27433370 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgtggaccagctgatcctgttcgtctttgtgtgctgtttgtcctcgaggtttgctgatgcgtatgatccggtagatccgaatgggaacatcataatcaactgggattttcagagcatcgagaacgtctacacggtcatggtgagcgtccacaatcaccagctgtaccgccacatcgagcagcccgggtggcggctgagctggaggtgggctggcaacgagatcatctggggcatgacgggcgcggaggcgacggagcagggcgactgccaccggatccgtggcgccacccggccgcattgctgcgagaagcaaccggtcatcgtggacctgccccccggcacgccgtacaacaaccaggtctccagctgctgccggggcggcgtgctgtcgtcgctcacgcagaacaaccggacgtccaccgcggcgttccagatggtggtcggcggcttcaggcgcgccacgtaccacgacggcgacaggggccccgcgctgccgtcacgcttcggcgtcggagtgcccgggtactcctgcagcaacgccaccaaggtgaacgcgaccagcgagggcgagaagccggagctgccggccggcgacggtgaggcggtcgcgccggtcttccggtgcaccgaccacatgtgcccagtccgggtgcactggcacgtgaagatcagctaccgtgagtactggagggtgaaggtgacgatcaccaactacaaccaggtcaagaactacagcgactggaacctggtggtgcagcacccgaacctccggagcctgacgcagctgttcagcttcaactaccagcctctcatcgagtacggcaccctgaacgacacggggatgttctgggggatccagtactacaacgagatgatgctgcaggacggtaatgtgcagacggagatgatactgaagaaggacaagagcgacttcaccttctccggtggatgggcgttcccgaggagggtgtacttcgacggccacgagtgcgtcatgccaccgccggatcagtaccccttgctgcccaacggaggcccggactcgcgcgtctcggcggcgcaattgatcgccagctcgtgcttgttgttgccattcattttccttatcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MDVDQLILFVFVCCLSSRFADAYDPVDPNGNIIINWDFQSIENV YTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHC CEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDG DRGPALPSRFGVGVPGYSCSNATKVNATSEGEKPELPAGDGEAVAPVFRCTDHMCPVR VHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYG TLNDTGMFWGIQYYNEMMLQDGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVM PPPDQYPLLPNGGPDSRVSAAQLIASSCLLLPFIFLIM</aaseq>

Gene Sequence

<dnaseqindica>1..61#203..279#554..981#1370..1638#1722..2005#atggacgtggaccagctgatcctgttcgtctttgtgtgctgtttgtcctcgaggtttgctggtgagctctgtgatattcaagtcatgtttgtttcccgtgctgtttcttggacatcgccgtcgtgtttgccctccgagtgttgttcttaggtttgattgattgaactacggtcggtgatttgttttctctatgttttgacagatgcgtatgatccggtagatccgaatgggaacatcataatcaactgggattttcagagcatcgagaacgtctacacggtgcgcatgcctgctagtgagtttagtactgccgttaatttttcactgtttgggatcatcccagtagtagatatgcagtcgaataaaagattcagaatttcagacgtaccatcgttgcaactatcctttttatctcgattctaacttttccccattatttcctccggtgaaacttatcattagtacagccgaaatacgatattctgacaaaaaaaatttgacgttcgcaaccgccaacaccacgaatcaatcgatatatcctgtgcttatgcaggtcatggtgagcgtccacaatcaccagctgtaccgccacatcgagcagcccgggtggcggctgagctggaggtgggctggcaacgagatcatctggggcatgacgggcgcggaggcgacggagcagggcgactgccaccggatccgtggcgccacccggccgcattgctgcgagaagcaaccggtcatcgtggacctgccccccggcacgccgtacaacaaccaggtctccagctgctgccggggcggcgtgctgtcgtcgctcacgcagaacaaccggacgtccaccgcggcgttccagatggtggtcggcggcttcaggcgcgccacgtaccacgacggcgacaggggccccgcgctgccgtcacgcttcggcgtcggagtgcccgggtactcctgcagcaacgccaccaaggtgaacgcgaccaggtcaccgatcggcaggcaccggcacgtccagtctctgcgtaaggcttctcccctttctttcttatcgcggcgcgtgcgttgagcgggagttctgagcgattcttgctgccgcgcgcgcgggcgccgtgtgcagtgacatggcaggtcacctgcacgtactcgcagttcatggaggccgcgtcgccgacgtgctgcgtctccctctcgtcgttctacaacagcacgatcgtgccgtgtccgcgttgcagctgcggctgcccacgatcccccacggcgccgcaatgcatcaggcaaaaccccccgcgcaccctcgtttcccacaccgcttaaatcctgtgctatatatcccactcactcatctgcatttttggttggtttaattttccagcgagggcgagaagccggagctgccggccggcgacggtgaggcggtcgcgccggtcttccggtgcaccgaccacatgtgcccagtccgggtgcactggcacgtgaagatcagctaccgtgagtactggagggtgaaggtgacgatcaccaactacaaccaggtcaagaactacagcgactggaacctggtggtgcagcacccgaacctccggagcctgacgcagctgttcagcttcaactaccagcctctcatcgagtacggcaccctgagtaggtatcactcactttagcatgatctccgttcgaattggatgaacagagtgaaccacagaagttgttgtttgattttgcagacgacacggggatgttctgggggatccagtactacaacgagatgatgctgcaggacggtaatgtgcagacggagatgatactgaagaaggacaagagcgacttcaccttctccggtggatgggcgttcccgaggagggtgtacttcgacggccacgagtgcgtcatgccaccgccggatcagtaccccttgctgcccaacggaggcccggactcgcgcgtctcggcggcgcaattgatcgccagctcgtgcttgttgttgccattcattttccttatcatgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0540300, RefSeq:Os04g0540300