Os04g0541900

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0541900| Description = Conserved hypothetical protein| Version = NM_001059982.2 GI:297603100 GeneID:4336543| Length = 3021 bp| Definition ...")
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Gene Name

Os04g0541900

Description

Conserved hypothetical protein

Version

NM_001059982.2 GI:297603100 GeneID:4336543

Length

3021 bp

Definition

Oryza sativa Japonica Group Os04g0541900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27531582..27534602

Sequence Coding Region

27531582..27531971,27532690..27532845,27533463..27533674,27534473..27534602

Expression

GEO Profiles:Os04g0541900

Genome Context

<gbrowseImage1> name=NC_008397:27531582..27534602 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27531582..27534602 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttccgggaggcgaggacggcggcaagcaccgcggcgccaccgccgacgaggaggccgccgcgaccgcggcctcgctgaacgacctatgcgccaccgccggggatgcgggggggctccccgcgctggcgccgttcccgagggcggcggtttgggcggtcgcggcgctgctcgcggtggggctcggcctcggcgcgctcgtcctcgccgtcgtgcacagcgccgcactgctcgtggtggccgtgctcctctccgcggccgtcgtcgcgttcctcctgtggaatgccgcggcttccgcgtcggggcgcgccctgcggcggttcgtggacgggctgcccgcgtccagcctccgctccgccaccgacgaccagctcgtcaagatcaccggtcttgttgcgtgcggtgatatttcactgatttcttcatacgagaaagtagagaattgtgtatatacatctacattattgcgaaaatgtggaagatggggttctgaagtagctaatcctaagaaccgctgttccaagtggaaattgacacacgctgagaggtttgctgctgatttctacataacggatgcaaaatcaggtaaaagagccttggtgaaagctgggcacgactcgagagtagttcccttgatcgatgaaaatcttctggttacgacaagcgggaacactgagttatcttcaaccttgaggtgttggctggatgaaagaaatattccttctgaagaatgtcagcttatccgtctcgaagaaggtgttcaccaatccccatctttgcaaaaccaaaatgataagcgcctttacctcccaagcagcattctccaaggcttccatccttctgccacacgtgcacttgaaaaaactgtgaaatctcgagaggtctga</cdnaseq>

Protein Sequence

<aaseq>MLPGGEDGGKHRGATADEEAAATAASLNDLCATAGDAGGLPALA PFPRAAVWAVAALLAVGLGLGALVLAVVHSAALLVVAVLLSAAVVAFLLWNAAASASG RALRRFVDGLPASSLRSATDDQLVKITGLVACGDISLISSYEKVENCVYTSTLLRKCG RWGSEVANPKNRCSKWKLTHAERFAADFYITDAKSGKRALVKAGHDSRVVPLIDENLL VTTSGNTELSSTLRCWLDERNIPSEECQLIRLEEGVHQSPSLQNQNDKRLYLPSSILQ GFHPSATRALEKTVKSREV</aaseq>

Gene Sequence

<dnaseqindica>1..390#1109..1264#1882..2093#2892..3021#atgcttccgggaggcgaggacggcggcaagcaccgcggcgccaccgccgacgaggaggccgccgcgaccgcggcctcgctgaacgacctatgcgccaccgccggggatgcgggggggctccccgcgctggcgccgttcccgagggcggcggtttgggcggtcgcggcgctgctcgcggtggggctcggcctcggcgcgctcgtcctcgccgtcgtgcacagcgccgcactgctcgtggtggccgtgctcctctccgcggccgtcgtcgcgttcctcctgtggaatgccgcggcttccgcgtcggggcgcgccctgcggcggttcgtggacgggctgcccgcgtccagcctccgctccgccaccgacgaccagctcgtcaagatcaccggtgtatgtttgcccatttgcaaaagcattatctttcttttgccatgaatgtgctgctattgatccaataagtctattttattccgtctttaagtctctgaattctgaattgctgaattgataaggagcattttggtggagccactagatgcatggagaataatgcatttggtgccgtaattctacatcatatagtgctttcatgtaacttgtggaattgtggaccggatacacttgcattgtttcatagtggggtttgtttgcaccttgagtgttcttcgttttttggtggtcacgtagttcagtgtaaataggatgcgccaaattatggattccataatcgtgcaatggggagcaagcacagcaatgtccagatttgtatgcagtaggttcactggccatatcgaaccagtcaagggcagtttctttgtttcctttctcaactttgtactggtagtacattgaatgtatcttctagtctgaaggggaaattttgtgccttttaccttagggagtgtatgctgtgatgcattgatttgtgtttttttccacattttcctattacagtacatttattgtttttcattatgttctactcttgttacaaaaaatattctttttagttgtgttcagttttcagcatgttattcttgcattgtttaaaaaaaatcagataatgtgttattcttgcatgtgtggtgatgccccttgttttatgcagcttgttgcgtgcggtgatatttcactgatttcttcatacgagaaagtagagaattgtgtatatacatctacattattgcgaaaatgtggaagatggggttctgaagtagctaatcctaagaaccgctgttccaagtggaaattgacacacgctgaggtaaggatgctttgttgctatctcaagggcttctagtgtatgtgtggtggagtctacagaacacatgggtattttcatttatcttgcaccttatgtcattaaaattttgtttttttaattattgtttcacctttttgtttatcatgactcaagctagcccaattcaatccaactgtaatactagtgtgtttgttttttatgatgattacaaaagcattactatttcataaactagcttgcattattattgtacacaattagtaataacctattgtttcagttccagttccacttgtgcaatattggtgataaattggaaattcataataccgtttctcagttgtatgtaaagttcgagagatcttgactgcatagtacaatggaacaaaaaaaacaatacatttcataagtagatcaacgagtagacattacccatttttcacaattttaaaactgttgctcatctgcgttatgtctgagttgtttatttagtagtcttttaatttctctaatgtcattgtatctgttgctgtaaaattgagttcattataaaggcagtaagatgccatagatagtgtgatgtttgtcttattcaaatattttgtggagttgggcagaggtttgctgctgatttctacataacggatgcaaaatcaggtaaaagagccttggtgaaagctgggcacgactcgagagtagttcccttgatcgatgaaaatcttctggttacgacaagcgggaacactgagttatcttcaaccttgaggtgttggctggatgaaagaaatattccttctgaagaatgtcagcttatccgtctcgaagaagggtaatcaaattgctcgataatagatatacattttgccagcatctttgcatattgcatctttggaaacttaaaatgtgaatgcaaaacctgtaggtatatcgctgaaggtatgcgattgagcgtgatcggaattttaagcaagaaagatggcgatctcatgatacttccaccacctgaacctatttctacaggttgtgtgtttctgtcgtttctccttccaacttattttgatggtattgttctgagattagttgatagaagctattttatgcacaattctggtgtttcgtgaactgatgtcagaactcatgagatgtaagtgtaacagctaacaatgctagtgcaatgcccttgccccttgggatcttctatgggaccacaacatcattagaatgtaaattcttacttgattgaaattgctaatgccttgcccgatctggaagtgtattgggtatcttctcaattctcatttcatttggccccttcatttatcattgctgtacattggtagttctgccgatagtgtactactcttatcttcagttttactagtcctactagtggagagtatatgagatgcctcggtggtacgttcatagtttggttccttgcagatacttgcgtagtgccctgtgagttatgccgatcacagaactgttatttttctgtaagagcctgacaggtccttttgttttgccaacaatacagaaagttagtacgtaattttcttcccgatggttaaagtcttaaagaggtggtcaaacaaataaccttgccagtctttgtcgttctgttcagtgttcaccaatccccatctttgcaaaaccaaaatgataagcgcctttacctcccaagcagcattctccaaggcttccatccttctgccacacgtgcacttgaaaaaactgtgaaatctcgagaggtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0541900, RefSeq:Os04g0541900