Os04g0542000

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0542000| Description = HAT dimerisation domain containing protein| Version = NM_001187100.1 GI:297723330 GeneID:9272389| Length = 7102 bp| ...")
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Gene Name

Os04g0542000

Description

HAT dimerisation domain containing protein

Version

NM_001187100.1 GI:297723330 GeneID:9272389

Length

7102 bp

Definition

Oryza sativa Japonica Group Os04g0542000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27535627..27542728

Sequence Coding Region

27541876..27542202

Expression

GEO Profiles:Os04g0542000

Genome Context

<gbrowseImage1> name=NC_008397:27535627..27542728 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27535627..27542728 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtgttggaccagccatcgcatgctagacaggtacctagaggatgagttggtttcaattaatacagaaaactttaagattcttgattggtggaaagtggctaggacaagctttcctacattgaggaaggtagcacgagatatatttgctattcctgttagcactgttgcatctgaatatgcatttagcacaagtggaagggttcttagtgagcatcgtagccggcttactccagaactcttggaggccttaatgtgctcacaagattggctgcgaaacaagtatcgaggtacatatgctgttttattcatacatcatgcttag</cdnaseq>

Protein Sequence

<aaseq>MRCWTSHRMLDRYLEDELVSINTENFKILDWWKVARTSFPTLRK VARDIFAIPVSTVASEYAFSTSGRVLSEHRSRLTPELLEALMCSQDWLRNKYRGTYAV LFIHHA</aaseq>

Gene Sequence

<dnaseqindica>6250..6576#acatcgcgaccgccactagcccgccaataatagcagcgcgcccaaaggctaaaaaaaacccacgacgcgctggtcagtagccaccacacagcggcacaggcgctgcggcagcggcagctgagcgagtgagcgccgaggctccccggccatgtccaagcccgatcgccgctccggcgccgccacgtccccgtcgctccgcttcctcggcctcctcaagcagcccgacgacggcagcggcgaccacgagctggagctcgacgagcgcgacgtcgtctggtcgtcgtcgtcgtcgtcgaacacctcgccctcctcgtgggcctcctcaaccaattcctcgccgtccctcaccccgtccgcgtccgcgggcgtgggcgtccgccggccgctgtcgtcgtcccacgccttccccgccgccggcagcgtcggcctgtccgccctcctcgccgacgatcacgcccccacggcgtccatcccggccaaggcacgcccggagaggcagcagcccccgcagccgtaccaccagtcggcgccggtcgccgtgccggcctggcccaaggccacggacagcgacaggcgtcgccgtggtgtgcagcacgaggccctcaacgacgaggaggacgatgacgacgagctcgtggtgccgccgcacgagatggccgcgcgccgcgccgcggcggcggcgtcggtgatggagggcgccgggcggacgctgaaagggcgcgacctccggcgcgtgcgcaacgcggtgtggcgcaccaccggcttcctcgacctgtgaaaaaggatatgaacctttggaggtttctctcgctgccgccacacatcagcaacctgcttcgtgttgtactggattactgatgatccgtatgaaaaaaggttggggatttcttgctaagctcgggattgtagggggtaatgtttcgatggctagtactatttgttagtattttgggctatggctagttaagcataggctgaaattttattccattatcttaaaaaatttgttagtattaggccctgtttagatgggactaaaacttttaagttcctatcacatcggatgtttgaaaattaattataaatattaaacgtagactattaataaaacccatccataatcttggactaatttgcgagacgaatctaatgagcctaattaatccatgattagcctatgtgatgctacagtaaacattctctaattatagattaattaggcttaaaaaatttgtctcgtgaattagcttttatttatgtaattagttttgtaagtagtatatatttaatactctaaattagtgtctaaagacagggacttaagttaagtccctggatgtaaacaccaccttagatcagtgtcgacgtgaggttcaaggttctgaagttctacgttttccctagagaagaaaactagtactccattggttatgaagcaattaatcgcagtgggctgcaattgtttcagactagactgcaacaattttctcttcgaaagaaggtgctttacaaagcaatccgtagaaagattcagctttggattgtaaatggttcgagatagctaaatttgcatggtcaggtgttaagacaaagctgaaaaaaggacgtattgtgtgcgtactgttttgtatatcatcactatgtgttaaaggaagtgacttttcaaaccaaaatagaagtgatcttctatagttgtattgacatatttcagtgtgacatcagttgtgctcatggctaaataaatcaattgtgctccatgaacaatttaaataacattttttttaagttaattagactgtttagaactttaacattgttgaggggaaaaaaacatttcaacttcaagataacctggcatgctatatgccacaccacacctacagttatctcggaaagataccatatcaacaggcgatatcacacataaatgagaaaataatattcgttccgtcctacgacgtttaaaatttattcaaaaaaaaaacacaattctagaggttacagcaaagctgcagcatctatctattatattattaagacagcttgaaaatgaggtaccacgttcgctgtgggggctaaaaattcccacattaatcggagaaaaagaaaaaaaaagaaaaggagagtctaagtagaagtataatctaaaaatagctgaaattcggaattaaaaataagcaatattgaaagaagtttccatataagaacccaatacgagattaaccaaaattcaaaataaaaataaaatacaatctaaaattagaaaaaggaaaggagagtcaaggtaggaatacaatttaaaaatagctgaaattcagaattaaaaaaagtaatattgaaagaagtttctatataagaacccaatacgagattaatcaaaattcgaaataaaagtaaaataaaatacaaaattagaaaaggaaaggagagtccaagtaggaatataatttaaaaatagctgaaatttggaattaaaaaaagtaatattgaaagaagtttccatataagaacccaatacgagattaatcaaaattcgaaataaaagtaaaataaaatacaaaattataaaaggaaaggagagtccaagtagaaatacaatttaaaaatagctggaattcggaattaaaaataaggaatattaaaagaagagtccatataaaaacccaatacgagattaattaaaatttagaataaaaataaaaataaatccaaaattagcaaaagaaaataaaagaagagttcaagtaggaatacaatttaaaattagcttaaattctgaattaaaaataagcaatattgaaagaagaatccatataagaacccaatacgagattaattaaaattttgaataaaaaataaaataatatccaaaattagaaaaattaaaagagagttcaagtaggaatacaatgttgaaacaactgaaattgaaaataaaaaataaaaacattaaaagaacataacacggtattaactaatttttttaaaaaataaattctgaaattagaaaaagaaaaataagatttcaattaggaatacaatttataaataactaaaatttgtgataaaaataaagactattgaaagaaaagaccatctaaaacacatgacgagataaattaagtaacaagcctataaaggagtagagtggtggcaggagtagagtggtggcggttgatagttgatacgacatataaaaattgttaataaaacaacaaatagaatcctaatgacgattaaattgagggacgttaggcagaccgtgaaacaaacaagtaaggcggttgccgggacttctagaaagtaaaaaaaaaaccattgatagtaatattcgatttttaaaatctcaatgacaataaaaaggagaagcagcgcgcggggtgcataagagtatagttgcagagccaccgacggttgacgggacttctagaaaataaaaaatgaattccaacgatagttatgttcgatttttagaatcacaatgaatattaaaagaagagtccatataaaaacccaatacgagattaatcaaaattcgaaataaaaataaaatacaatctaaaattagaaaaggaaaggatagtccaagtaggaatacaatttaaaaatagctgaaattcggaattaaacataagtaatattgaaagaagtttccatataagaacccaatacgagattaatacaaattcgaaataaaaataaaataaaatctaaaattagaaaagaaaatagagtccaattagaaatacaatttaaaaatagctgaaattcggaattaaaaataagcaatattgaaagaagtttccatataagaacccaatacgagattaatacaaattcgaaataaaaataaaataaaatctaaaattagaaaagaaaatagagtccaattagaaatacaatttaaaaatagctgaaattcggaattaaaaataagcaatattgaaagaaggttccatataagaacccaatatgagattgatcaaaattcgaaataaaaataaaataaaatccgaaattaaaacattaaaagaacacaatacggtattaactaatttttttaaaaaatttctgaaattagaaaaagaaaaataagatttcaattaggaatacaatttataagtaactcaattttttgataaaaataaagattattgaaagaaaagaccatctaaaacacatgacgagataagttaagtaacatgcctataaaagagtagagtggtggcgattgatacgacatataaaaattgttaataaaacacaattgccgtgaaggagggacgtcaagcaggccgcgaagcaaatgagtaaggcggttgccaggacttatagtaagtaaaaaaaacaaaccccattgataatcatattcgatttttaaaatctcaatgacaataaaaaggagaagcagcaggtggggtgtataagagtatagttgcagagccgtcgacgggacttctagaaaataaaaaatgaattccaacgatagttatgttcgatttttagaatcacgaggacaataaagagtaggcggcggacgggttgtagaggggcatagtggcatcgtttgatgggacttctcaaaattataaaaaatgaaactacaagtccaatttttaaaggttcgaaacttctaaaaagtaaaaaaaaacaatgctaatcatgttcggttctaaaatctcaatgacaataaagaagggaggcagcgggcgagccgtagaggagtacaatggcaaagccgctgacggtttggtgggacttctagaaagtaaaaatgaaccaaaacgataattatgttcgatttttaaaatctcaatgacaataaagagatgagatagttgatgggccgtagaggagtataatggcaacgtttgacgagacatctagaaattataaaaataaaacccaacgtgacaataaactctaaaaactataaaatccattttttaaaggttccaagaagtatgaatagaaatagtggtagatcgagcaagcaaataaagaaggagatgacataaggggtagtaattggtgtgacttttaaaaactatataattagaaacacgagaatgataaggtttggtctttcaaagtcttaagacaatgagatagctatttaacaaattttgaataaatcatattaaaaatagataattttgtatgggtgctagccgcgcaattgcacgggctacccagctagtttgcattaaatcaaaacctatggaaatagtacaaccaagagtattaatgaggcacaatatgatcatttctccacactactagagatggcaatgggtacccggtccccggtcccccgtggagaattctcccattaggtgatggtgatggtatcaattgtgtctccatggggaatcaaatggagagaaagtagtctccgtcgggtctggcgagggcgggtttggttcaccgtccccgtccccgccctccgtggaggcccgatataaaagtatgtgtgtagtaatatcctgtgtatttggcccataaaaaccagcccaaagcatagagtatataaagcaattgtgtaaccctaaccattccaatccttatcccctccgtccccattccccagtccacacgccaccgtccgccccgctcgtcccaatccccacgccgccacgcgccacgccgtcgtccgtcggccacagcggctgagtagcgctggctcccgatctcgcgcccgcgcgcagggccgccgcacccgccgtgtcggcgtccgcgccagcgccgagctgcccggtcccaggtggcccagctcccagctcccgagccccgtggccaggtcccagcgccacgccgcgccgtcccgttcccttcactcccagtcccagcctcccaggtccgaggacgtcgtggactcggcaccggccaccggacgtcggcctcctcctccaccctccgtcaatatctgatccatcatgtaggcttatttgttttgctgatggtggatgcaggtgaaggcttcggtggcaagaaaggggaaaacgacgagtccacacgacgaccagccgctcgagtccgccatggcttcgccttcaccaccgctaagctccgacgacgatgcaaggtgagcacatctagctgtcctactcccaacttagtacccctccctagatgcctaactacagtaccatatccccctccccctccactaaattcctcttccatggctgcatcgttgtctcgttgagtcactaactcacgttcggcggtccacaataagggacgccaatgcggtgttggaccagccatcgcatgctagacaggtacctagaggatgagttggtttcaattaatacagaaaactttaagattcttgattggtggaaagtggctaggacaagctttcctacattgaggaaggtagcacgagatatatttgctattcctgttagcactgttgcatctgaatatgcatttagcacaagtggaagggttcttagtgagcatcgtagccggcttactccagaactcttggaggccttaatgtgctcacaagattggctgcgaaacaagtatcgaggtacatatgctgttttattcatacatcatgcttagcatagattttacaatgcaatggatgcaaaataattcttataattgttatcttgtagctgataatgaagaagcagcaagcttttggagttgccttcaagatatccaagatcagattgaggtattctttcaacaacttaaaattagcaatcaaactcctactgccattatttgttatatccttataaaatacttgactaattgaatatcttttgctacttctttaatttagggacttgctcttgtttgaagacatgaatgtatggacatgcactgttcttgcaatgattttggatgtttgtaacccctgttatgtgtcatgataaacttgtaaaaccatggcaatgcttttggatatttggcacaaaagacctactccgaactatggttttgtgtatgcctaggacaacatgtgttgctactgcaatgtggtgataactaatgagtgatgactgatgaatgatgaatgatcatgtattattgtgttgttgcttaatctgggaatatgatggatattgtattcttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0542000, RefSeq:Os04g0542000