Os04g0543500

From RiceWiki
Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0543500| Description = Homeodomain-like containing protein| Version = NM_001059989.2 GI:297603110 GeneID:4336551| Length = 1106 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0543500

Description

Homeodomain-like containing protein

Version

NM_001059989.2 GI:297603110 GeneID:4336551

Length

1106 bp

Definition

Oryza sativa Japonica Group Os04g0543500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27608711..27609816

Sequence Coding Region

27608947..27609564

Expression

GEO Profiles:Os04g0543500

Genome Context

<gbrowseImage1> name=NC_008397:27608711..27609816 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27608711..27609816 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcttcttcccccaccaacgccgcggccgccgcccgccgcgtgccgccgccgtgctggacccccgacgagaccctcgcgctcgcccgcgcctacaccgcgcgacgcctcgcggtgggacgggcgcacctgacctccgccgactgggcggccgtcgccgacgcggccaccccgaccaagaccgcgcgccagtgccgccacaaggtcgagaagctccgccgccgcctccgatctaagcgccgccgcccctgcccgctcctcgacgcgatcgatctcctcgacgggccttccccttccgcgtccccgtcgcaatccccctccccgccgccgccagcctcgccgccgcctcttcctcccgctccctcctccccgcctcccaagaagaggaggctgcctgatggcgatgccgatgccgatgcggaggatgacggggagagcgacgtggtgaaggcgctgagggcgatcggggagggtttcctgcgggcggagcagaggcggatggaggcggcgaggaagacgcagcagatgcgcatggagatggcactccggcacctcgattcgcagcggaggctcatggaagcgctcgtcgaccgcatcattgactccctagagtaa</cdnaseq>

Protein Sequence

<aaseq>MASSSPTNAAAAARRVPPPCWTPDETLALARAYTARRLAVGRAH LTSADWAAVADAATPTKTARQCRHKVEKLRRRLRSKRRRPCPLLDAIDLLDGPSPSAS PSQSPSPPPPASPPPLPPAPSSPPPKKRRLPDGDADADAEDDGESDVVKALRAIGEGF LRAEQRRMEAARKTQQMRMEMALRHLDSQRRLMEALVDRIIDSLE</aaseq>

Gene Sequence

<dnaseqindica>237..854#gagcgcggctgcgccgcgcgggggtgtcgggtcaagatgtcaacccccacaacccgcggttggcgccgccgccgacgccgcccaccgccgcccgcgtgcgcccaccgccacctgtcgccgccctaaaaagactcctccgttataatcccccctcaccgtcccttcccccaacctccgccccacaccaccaccaccgcctccgcctccgcctccgcctcctcctcaccaccgttgcgatggcttcttcttcccccaccaacgccgcggccgccgcccgccgcgtgccgccgccgtgctggacccccgacgagaccctcgcgctcgcccgcgcctacaccgcgcgacgcctcgcggtgggacgggcgcacctgacctccgccgactgggcggccgtcgccgacgcggccaccccgaccaagaccgcgcgccagtgccgccacaaggtcgagaagctccgccgccgcctccgatctaagcgccgccgcccctgcccgctcctcgacgcgatcgatctcctcgacgggccttccccttccgcgtccccgtcgcaatccccctccccgccgccgccagcctcgccgccgcctcttcctcccgctccctcctccccgcctcccaagaagaggaggctgcctgatggcgatgccgatgccgatgcggaggatgacggggagagcgacgtggtgaaggcgctgagggcgatcggggagggtttcctgcgggcggagcagaggcggatggaggcggcgaggaagacgcagcagatgcgcatggagatggcactccggcacctcgattcgcagcggaggctcatggaagcgctcgtcgaccgcatcattgactccctagagtaaatctcggtggcgcaaaggtgtctcctgtcaaggttttcttgcttgtcctgattgcccactggcttggcttgcgagtttaggagttaattagagttgttcatatgtactgtgatggatgtctgatgtaggcgtagcttggaaatcgtagtaacctttctatctatcttgtatggcgtatggaaaataataacttagcctgttctgtgtttattgttttgtctcaagctttaatttgttcaattgtgtgtggca</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0543500, RefSeq:Os04g0543500