Os04g0543900

From RiceWiki
Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0543900| Description = Similar to Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Version = NM_001059992.2 GI:297603113 GeneID:4336554| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0543900

Description

Similar to Glutamate dehydrogenase (EC 1.4.1.3) (GDH)

Version

NM_001059992.2 GI:297603113 GeneID:4336554

Length

4530 bp

Definition

Oryza sativa Japonica Group Os04g0543900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27632123..27636652

Sequence Coding Region

27632461..27632568,27632676..27632789,27634232..27634453,27634528..27634602,27634690..27634707

Expression

GEO Profiles:Os04g0543900

Genome Context

<gbrowseImage1> name=NC_008397:27632123..27636652 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27632123..27636652 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgcgctcgccgccaccagccgtaacttccggcaggccgccaggctgctcggcctcgactccaagctcgagaagagcctcctgatcccgttccgcgagatcaaggtggaatgcaccatccccaaagacgatggaaccttggcgtccttcattgggttccgcgtgcagcacgacaatgcccgcgggccaatgaaaggtggcattcgctatcaccctgaggttgatccagatgaagtaaatgcacttgctcaactaatgacatggaagactgctgttgcagcaattccatatggtggagcaaagggtgggattggatgcgctcctggtgaattaagcacgagtgagctggagcgtttgacacgtgtatttacacagaaaattcatgatcttattggagctcatactgacgtgccagctcctgacatgggaactaattcacagaccatggcttggattttggatgagtactcgaaattccatggtcattcaccggcagttgtcactgggaagccaatagtcttggtggatcattag</cdnaseq>

Protein Sequence

<aaseq>MNALAATSRNFRQAARLLGLDSKLEKSLLIPFREIKVECTIPKD DGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAK GGIGCAPGELSTSELERLTRVFTQKIHDLIGAHTDVPAPDMGTNSQTMAWILDEYSKF HGHSPAVVTGKPIVLVDH</aaseq>

Gene Sequence

<dnaseqindica>339..446#554..667#2110..2331#2406..2480#2568..2585#atctttgctttcttgctccgcctacctggatggatggatcccccctccctattaatacagcacgcttcttcctcttcctcctcacgattcaagccaaacgcagccggccgacctcctcccgtgccttcctcctcgatccccggagagagaaaaaaggctccatcttttttcctctttccgtttttgggcgcgaacgcctcgtcccccccggatcgatcttgctcgcgcgcggtccgtagtcgcgtgctctgttcgaaaggcgagtccctttttttttttcttctccggccgcgggcgctaattttcttggagggcgacgcgccacctttggcccggccatgaacgcgctcgccgccaccagccgtaacttccggcaggccgccaggctgctcggcctcgactccaagctcgagaagagcctcctgatcccgttccgcgagatcaaggtgagacggggttttttttttttttgattcctgtttccagcttgttttgctgcggttgctggctttgttgtttcatcaggcgtagcgtaaccccgctctctgttcaggtggaatgcaccatccccaaagacgatggaaccttggcgtccttcattgggttccgcgtgcagcacgacaatgcccgcgggccaatgaaaggtggcattcgctatcaccctgaggtgaggattgtggtttgatgagaatctgtttttgattttgtccagtaataatgccggggatgtaaatcatcttccttattatctggaaatttgaccggagatgattaagcatgaataaatagtgaagtggttataaactcggaatgttttgacagtgactgtctcatgtcaatgggatcattgtttcgttttggtgagttattagatctacggtacttgttaacttgttattccttccttgtttgcatatggcctttccagttcggtgagttattcttttaggaaatgtgcgtgatgttactttcagtttcatacctttatttgtaatctactttatgatattttgtggatcgtctgggcactgggctgtcagtttgtcatgcagatggcgtgaactgaaaatccttgatattttgcaaagcatgtgttgcttttgtactactatgcgcttatgtgcttttacattcagatttatatttctttctgttgaactgtcaacctaaatgtatcttttccatactgacaaaagaatcccaatgggcacatgccaatcttcttcctctgtcaaattgtttctgtaatttctgttttttcttgaactattatttaactggcattttgagaaactagaaagtttgatgcccagacatgctacagatgctagtattcagtattggagacaaccactcaaccagctttgttttcttctgtgataatttcttttgttctttactgctccaatcatacttcggttcttgttgctggaagccattaaatttcatacagataggtgcttgttataattaaacctagggaataatcccttaggtttttccaaaactgcgagcttatggtattttcctgttgaaaatgccagagttatatatgtgcaccatttaggttccaaatgaagatgagggattttcaaattttaggttaaaaaaaaaacagtctcctggagtactaataaatataaagcattaaaagcgctatgagcttctgagacttttattgtcgtgttttactttgtacttaataaataaatggatttcctttgatgatgaattgatgtttgttatcagttagctaacagaaaagcagctaacctatcaatcaattcctagagtaagcaattgatgtcagcagttgttaatttgcaaaggaattttttgtaagtattaccgtaagactttcacaagctaatgtagaaagtcaactataatattttctgctgaccatactttgtcttataaattattcattgtagtctgagattcatctgtttctcatttttaaaactacaattgataatgaattttgggtgaggttccccctcctttataactttcttatcttcttaaatggcacccagctctcttgcgtgttcgagaaaaaataaaactaaaactaataagctatggtttcaccattctgctttgcaggttgatccagatgaagtaaatgcacttgctcaactaatgacatggaagactgctgttgcagcaattccatatggtggagcaaagggtgggattggatgcgctcctggtgaattaagcacgagtgagctggagcgtttgacacgtgtatttacacagaaaattcatgatcttattggagctcatactgacgtgccagctcctgacatgggaactaattcacaggtatattctgctttctctagtatttttctactacttcccttcatcatgtaacatcccctgtaattttgacacagaccatggcttggattttggatgagtactcgaaattccatggtcattcaccggcagttgtcactgggaagccaatagtaagtatactatacaacaacacaaatctagtttgtgtaaataacaatttacatccagtgattgtattttgnatatttttgttgtaggtcttggtggatcattaggtagagatgctgctacaggaagaggtgtgatgtacgctactgaggctcttttggctgaacatggaaagtccatttctggatcaacctttgttatccaggtcagtcataattaataatcgattgatttttgctatgcggattatttctaggatggttgaaggacaatactccatccgtcctagaatataagaagttttaggcttggacacggttattaagaaagtaggtagaagtgagaggtggatggtcataattggatgagtagtggaggtaggtggaaaaagtgaatggtggagtgctgttattggttgggaagagaatgttggtggagaagttgttatattttgggacaaatcctgagggctaaaagttgttatattttggtacgaagggagtaacatgcatcatcataacagcaaaaaaaaaaaaaaatctagctttcttcctgaaaattttaaaaccgcaattcagctatcaaatcagtctgttcattatcattttatcagtatgccagcaacatatgtattttgtttgtaataatcaatggaattttccagggttttggtaatgttggttcatgggctgcacgaatcatccatgagaagggtggcaaggtgattgcacttggagatgtgacaggctcaatcagaaacaagaatgggttagacatacctgctctgatgaagcacagaaatgagggtggtgctttgaaagattttcatgatgcggaagtcatggattcttcagagctactagtgcatgaatgcgatgttctcatcccatgcgctttaggtggagtgctcaacaggtaaaagctagtgtccatgtcgatccttaaattttctgccaatatgagttgtttatcggggtcggggatgactcttgaaactctgtccttacctggttgcagttgcattttcacccattatacctatctgttttttcttttttgtacttttgacattaaatggtacacagttgttttagacggtaatcttgttacatgttgaagaacctattttatctgattattctagttcaacagtagtatgcaccaagaaaaaaatagccaatttacatataattgatcttctgaagggaaaatgcacctgatgtgaaggccaaatttataattgaagctgctaatcatccaactgatccagaagctgacgaggtaaccacagaacaaaacattgtaccctaactttgtctttgagaaacatcagaaatgttgccaattttggcagttctgattgatgctgtatgcactacagattcttgccaagaagggagtgaccatattacctgacatttacgccaactccggtggtgtgatcgttagctattttgagtgggttcaggtaattgaaatgccggttcctacgatcttgtttcgcattagctttggatgaatacagcatctcccttatgcgctttgaacggttgcagaacattcaagggttcatgtgggatgaggagaaggtgaacatggagctccacaagtacatgaacaattctttccagcacatcaaggccatgtgtaaatctcatgattgcaacctgaggatgggggcgttcaccctgggagtcaaccgggttgcacgtgccaccctcttgaggggatgggaggcatgaggccattaacaacactcatatccatgtccgaaaatgttggacgaccaatgtctgatctgataaattcatcagaagtggccggcttggaaggagctcacttgcaataatattcaagatagatcggcgtcggcgtccttccaccgttccggcgaaaaataataataaatatattaagggtacctaacaaaaatgtgatgtttcttctttcgtttttacaaaaggccgattcaatcgtgcgtgattatagtattgacaaaaaatggtgtaagctctagaggcaatttgaatttcacaaaggttgtattctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0543900, RefSeq:Os04g0543900