Os04g0545400

From RiceWiki
Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0545400| Description = Plastocyanin-like domain containing protein| Version = NM_001060002.1 GI:115459733 GeneID:4336564| Length = 659 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0545400

Description

Plastocyanin-like domain containing protein

Version

NM_001060002.1 GI:115459733 GeneID:4336564

Length

659 bp

Definition

Oryza sativa Japonica Group Os04g0545400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27727316..27727974

Sequence Coding Region

27727316..27727701,27727803..27727974

Expression

GEO Profiles:Os04g0545400

Genome Context

<gbrowseImage1> name=NC_008397:27727316..27727974 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27727316..27727974 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaatcctgcctggctctcgcggtgtgcgtcctgctcgtgcacggcggcgcggcgagggtagccgaggcggcgtcgtacaacgtcggcaacagcgccggctgggacatcagcgccgacttcccgtcctggctcgacggcaagtcgttcttcgtcggcgacactctcgtgttccagtactcgaagtaccacacgttgagcgaggtcgacgaggcggggtacaggaactgcagcacggccagcgcggtgctctccagcagcgacggcaacacgacggtggccctcacggcgcccggcgaccgctacttcgtctgcggcaacgagctgcactgcctcggcggcatgaggcttcacgtgcccgtctccgagccggcctcaccgggcggggccggcgcgacgccggcgagcccgggcggcggcggcgccctctcccccggcgcggccggcgacgcgggcgtcccgacgctcgacctcggcgggtcccaccgggtgacggtggggcccgcggtggccacgtggctgtgcatcatcgctgcagccctgtttgtatggtga</cdnaseq>

Protein Sequence

<aaseq>MAQSCLALAVCVLLVHGGAARVAEAASYNVGNSAGWDISADFPS WLDGKSFFVGDTLVFQYSKYHTLSEVDEAGYRNCSTASAVLSSSDGNTTVALTAPGDR YFVCGNELHCLGGMRLHVPVSEPASPGGAGATPASPGGGGALSPGAAGDAGVPTLDLG GSHRVTVGPAVATWLCIIAAALFVW</aaseq>

Gene Sequence

<dnaseqindica>274..659#1..172#atggctcaatcctgcctggctctcgcggtgtgcgtcctgctcgtgcacggcggcgcggcgagggtagccgaggcggcgtcgtacaacgtcggcaacagcgccggctgggacatcagcgccgacttcccgtcctggctcgacggcaagtcgttcttcgtcggcgacactctcggtaagcgcccttgatttaccagcagttttggattgtttgcaattttgcatgctatccaactccaactcacctgtgtttttgtgatcgatcggccggtgcagtgttccagtactcgaagtaccacacgttgagcgaggtcgacgaggcggggtacaggaactgcagcacggccagcgcggtgctctccagcagcgacggcaacacgacggtggccctcacggcgcccggcgaccgctacttcgtctgcggcaacgagctgcactgcctcggcggcatgaggcttcacgtgcccgtctccgagccggcctcaccgggcggggccggcgcgacgccggcgagcccgggcggcggcggcgccctctcccccggcgcggccggcgacgcgggcgtcccgacgctcgacctcggcgggtcccaccgggtgacggtggggcccgcggtggccacgtggctgtgcatcatcgctgcagccctgtttgtatggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0545400, RefSeq:Os04g0545400