Os04g0546300

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0546300| Description = Similar to GMPK2=PROTEIN kinase| Version = NM_001060006.1 GI:115459741 GeneID:4336568| Length = 3890 bp| Definition...")
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Gene Name

Os04g0546300

Description

Similar to GMPK2=PROTEIN kinase

Version

NM_001060006.1 GI:115459741 GeneID:4336568

Length

3890 bp

Definition

Oryza sativa Japonica Group Os04g0546300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27752369..27756258

Sequence Coding Region

27753168..27754384,27755012..27755882

Expression

GEO Profiles:Os04g0546300

Genome Context

<gbrowseImage1> name=NC_008397:27752369..27756258 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27752369..27756258 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatagtagataagattgctgagcccaaagaacctttgatggtcactggtaggaaggtgcagagcttggaggcaccaataccgataaaggcgtcatggaaagggaagagctcccagcagcagcagcagcagcagcaggatgagaaggattttccagctgatggtgaggagagttttctgagcctggattcctcagacgaaggtggccggagttctttctcaggggccagtcaccccctggaaccaattgatatggatcttatgaagacggtctatgtcgcaattgatgaggagaaatccgagcaaccggtgtgtttagtgcgaggagtatcggcgaaagggccattcatagatgacctttcgatctgtgttacaggcatgaaggccaatgcagtggtaggtgcaggcagtgctgatggtttggctgaagagatgaaggtgccgggtgctgcggtgccatcattggcaacggcgcggtcatcgcaagctacagaagctgtgtccttgcctccagattcagaggagaaggactgtgtctgggatgcctcgcttcctcccagcggcaatgtgagccctcacagtagcattgacagcatgggtgtagtcacggcgatgaacactatgagcagctgtaccagcacatataaaagtgaagccgtatccagtgaaccagtgcctacgatggagaggaactgtgggagtgtgaagggcagcgttagaggtgactctctagaaagtgcaaaaaccagcatgagtcgagcaagtgatagcagtggtgttagtgatgacagcagctggagcaatatcactggaggtgctagtaagcctcacaagggtaatgatcctagatggaaggcaatacatgctgtacggactcgagatggtgtgcttggaatgagccatttcagactgctcaagcgtctaggctgtggtgacattggcagtgtttatctctcagagttgagtgggacaaggtgctactttgcaatgaaagtaatggacaaggcttccttggcaagtaggaagaaattgaacagggcacagactgagagggagattctgcagcttctggatcatccattccttccaactctgtacacacattttgagaccgacagattctcgtgtttggtcatggaattctgtccaggtggtgatttgcacacgctgcgacagagacaggcaggaaaacatttctccgagtatgctgcaaggttttatgctgcagaagtacttctagctctggagtatctacacatgttgggagttgtttacagggatctgaagccagagaacgttcttgttcgtgatgatggtcacataatgctttcagatttcgacctctccttgagatgtgcagtctcgcctacactgatcagagcatcagcttttgattctgatccaagaagagctggtggttcattctgtgtacaacctgtttgcatggaacccacttcagtctgcattcaacccgcatgcttcatgcccaaattgtttggtcagaagagcaagaagaaaactaaaaagacaaggtccgagctgggaccgagtgccacgaccatgcccgaactagttgctgagccaacatcagcccgatcaatgtcgttcgttggcacccacgagtatttggctccagaaatcatcaaaggcgaaggccatggaagcgccgttgattggtggaccttcggtatattcttgcacgagcttctatacggcaagacgccgttcaaggggtcaggcaaccgtgctaccctcttcaacgtggtcggtcagcagctaaggttcccagagtcgccgtcgacaagctacgcgagcagagacctcatcaaggggctcctggtgaaggaaccgcagcaccgcctgggcgtgaagaggggcgccacggagatcaagcagcacccgttcttcgagggcgtgaactgggctctcatccggtgcagcacgcctcccgacgttcccaggcccgtcgaggccgagctgcccgtgaagtacggcgtggcggaggcgattgggagcaacagcaagaggatggtaggcgcggacatgaagtccggtgggaaataccttgactttgagttcttctag</cdnaseq>

Protein Sequence

<aaseq>MEIVDKIAEPKEPLMVTGRKVQSLEAPIPIKASWKGKSSQQQQQ QQQDEKDFPADGEESFLSLDSSDEGGRSSFSGASHPLEPIDMDLMKTVYVAIDEEKSE QPVCLVRGVSAKGPFIDDLSICVTGMKANAVVGAGSADGLAEEMKVPGAAVPSLATAR SSQATEAVSLPPDSEEKDCVWDASLPPSGNVSPHSSIDSMGVVTAMNTMSSCTSTYKS EAVSSEPVPTMERNCGSVKGSVRGDSLESAKTSMSRASDSSGVSDDSSWSNITGGASK PHKGNDPRWKAIHAVRTRDGVLGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVM DKASLASRKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEFCPGGDLHTLR QRQAGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS LRCAVSPTLIRASAFDSDPRRAGGSFCVQPVCMEPTSVCIQPACFMPKLFGQKSKKKT KKTRSELGPSATTMPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF LHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPSTSYASRDLIKGLLVKEPQHRLGV KRGATEIKQHPFFEGVNWALIRCSTPPDVPRPVEAELPVKYGVAEAIGSNSKRMVGAD MKSGGKYLDFEFF</aaseq>

Gene Sequence

<dnaseqindica>800..2016#2644..3514#ctcgaccacaccacgccactcctcccctcctcatcgcgagagagaagagaagagaggcgagacgcgaggcacgagagtgcgtgtgggtgcggagttactcgaggagtggtagtaccagcaggcagcagcagtaacactggttggcggtggccactggcggcgagcgaggcagtggagaagaaccaagaaccccgagttctccctagggatctcccccttccctgcattcgaggtgattctttggttccattttttttgctagtttttttttgggttgattcttttctttctctcctctctgcgcgaggaggatctaaatgtgggtgggtatgtttctttggggggttttctccctcggtttgggaatcttgagatttaaggaagttttggcgtaatttggtgtgttattgtttgggatattgtttttcttgagaaagcaacgtctaattttggtggattggacggcgcttccgtgtttatgcagggtggagtttgtcctacttcagagggagtctcagtcgctacgcttggtgcccaataattagcctggaagcaggttggattcttggaacccgttggattgaagagaaatttggtcttgtttattcccttaatcattgtgctcgttgcaggtgaagtgctctccgcctctccgtgctgaaatctgattctctggtctccaggaatcctgttggtagggcagttcagtaggagataattgcttgcagatttgccttgtttggttgaactgggaagagggggtcaattagtggctgtgcacttgttatgctaaaattgaatggagatagtagataagattgctgagcccaaagaacctttgatggtcactggtaggaaggtgcagagcttggaggcaccaataccgataaaggcgtcatggaaagggaagagctcccagcagcagcagcagcagcagcaggatgagaaggattttccagctgatggtgaggagagttttctgagcctggattcctcagacgaaggtggccggagttctttctcaggggccagtcaccccctggaaccaattgatatggatcttatgaagacggtctatgtcgcaattgatgaggagaaatccgagcaaccggtgtgtttagtgcgaggagtatcggcgaaagggccattcatagatgacctttcgatctgtgttacaggcatgaaggccaatgcagtggtaggtgcaggcagtgctgatggtttggctgaagagatgaaggtgccgggtgctgcggtgccatcattggcaacggcgcggtcatcgcaagctacagaagctgtgtccttgcctccagattcagaggagaaggactgtgtctgggatgcctcgcttcctcccagcggcaatgtgagccctcacagtagcattgacagcatgggtgtagtcacggcgatgaacactatgagcagctgtaccagcacatataaaagtgaagccgtatccagtgaaccagtgcctacgatggagaggaactgtgggagtgtgaagggcagcgttagaggtgactctctagaaagtgcaaaaaccagcatgagtcgagcaagtgatagcagtggtgttagtgatgacagcagctggagcaatatcactggaggtgctagtaagcctcacaagggtaatgatcctagatggaaggcaatacatgctgtacggactcgagatggtgtgcttggaatgagccatttcagactgctcaagcgtctaggctgtggtgacattggcagtgtttatctctcagagttgagtgggacaaggtgctactttgcaatgaaagtaatggacaaggcttccttggcaagtaggaagaaattgaacagggcacagactgagagggagattctgcagcttctggatcatccattccttccaactctgtacacacattttgagaccgacagattctcgtgtttggtcatggaattctgtccaggtggtgatttgcacacgctgcgacagagacaggcaggaaaacatttctccgagtatgctgcaaggtgatctatttgaactacgactttgttcttcagcaaaatataatttgtttggagtagaattctgttgtttttctccttaaccgctgtgccactatgcttaccttctcactaatatctttactttctagaatctgttttaatctagataagctcttataaaccttttggaggttcttgagtctaaagcattatcactcctcaagttaaaaatgtaagtttcctcaatgaaaaacaaacatatggacataataaattttacaggaagctagtctgtggagcttcatagagaagctattagcaactttcaaaatcaaaatggattatgccagttgtgaggtgatgtggagaaaaggtagaaaaactgatggatggtgaaatgttgatccaaaaatttactctggttggtgttcactaatattgcatgtattccatttgttgactttgatataatgcaatccatctcatgtgtggccaacatagcatgtgtaaaataatattcagtcatgttctgatcctatttttgctccagttttttaactctataatgttagtttgccatactgaacttgaacagcttatacctggccattgctagcactaacatttatatgctctgattccgagcaggttttatgctgcagaagtacttctagctctggagtatctacacatgttgggagttgtttacagggatctgaagccagagaacgttcttgttcgtgatgatggtcacataatgctttcagatttcgacctctccttgagatgtgcagtctcgcctacactgatcagagcatcagcttttgattctgatccaagaagagctggtggttcattctgtgtacaacctgtttgcatggaacccacttcagtctgcattcaacccgcatgcttcatgcccaaattgtttggtcagaagagcaagaagaaaactaaaaagacaaggtccgagctgggaccgagtgccacgaccatgcccgaactagttgctgagccaacatcagcccgatcaatgtcgttcgttggcacccacgagtatttggctccagaaatcatcaaaggcgaaggccatggaagcgccgttgattggtggaccttcggtatattcttgcacgagcttctatacggcaagacgccgttcaaggggtcaggcaaccgtgctaccctcttcaacgtggtcggtcagcagctaaggttcccagagtcgccgtcgacaagctacgcgagcagagacctcatcaaggggctcctggtgaaggaaccgcagcaccgcctgggcgtgaagaggggcgccacggagatcaagcagcacccgttcttcgagggcgtgaactgggctctcatccggtgcagcacgcctcccgacgttcccaggcccgtcgaggccgagctgcccgtgaagtacggcgtggcggaggcgattgggagcaacagcaagaggatggtaggcgcggacatgaagtccggtgggaaataccttgactttgagttcttctagggttgtgctgtacttgcctagtgacaagagaagctgttggttgcaaaactgctggggctggtcagtttggtgttgtgattcgatgtgcttgacctggtggtgtttgtcgcaccacggcagcaaaattatcggatctgaaattctgaattggccagaattaggttgatatatgtttgcatgtttgaattcttctccccctgtccgtttctgtagtgtagtgctatctaacagtctggtttgaaacatgggctaacaattgcgttccaggaaggcctcaacgatggatatttctggaactagtagcgtataagctcagtctgtttaatagtcgcagatcaaagttcaatgtgcattctttcttgtgccatttaccgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0546300, RefSeq:Os04g0546300