Os04g0549600

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0549600| Description = Heat shock protein DnaJ family protein| Version = NM_001060020.1 GI:115459769 GeneID:4336584| Length = 4497 bp| Def...")
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Gene Name

Os04g0549600

Description

Heat shock protein DnaJ family protein

Version

NM_001060020.1 GI:115459769 GeneID:4336584

Length

4497 bp

Definition

Oryza sativa Japonica Group Os04g0549600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27904002..27908498

Sequence Coding Region

27904944..27905090,27905171..27905336,27905447..27905585,27907080..27907213,27907313..27907455
,27907593..27907791,27907914..27908236

Expression

GEO Profiles:Os04g0549600

Genome Context

<gbrowseImage1> name=NC_008397:27904002..27908498 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27904002..27908498 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttggggggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaaggaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcaggtgagatcataagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaaggtgaagctgatgaagctcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaa</cdnaseq>

Protein Sequence

<aaseq>MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKG GDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGA FGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPA TCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKK VLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTI SLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFV EFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEMRRKQ YQRKQEAYDEDEEEDAPRVQCAQQ</aaseq>

Gene Sequence

<dnaseqindica>943..1089#1170..1335#1446..1584#3079..3212#3312..3454#3592..3790#3913..4235#ggtcgcgtggcttgagcggtggtgacaccgctcgcctccgtccgcctcgcctccaccgagaggttctctctgccgccgattcaggtacgatcgcttcactacgccccaatctttcatggccgagactctcctaaggaccggttggatcgcgtatgagccccccgtgatttttctggaggggggaaaccgagtgtattttttgcttgttctgcgccgttttcttggctgttctaccgatcttgttggttggattcttcggaggagaggtggagccttgtcctgatttggaggggaggcgaagttttccagggttgtgtaggacacctcgtgggggttcgcggtggctggagaaatattcgtgatcagctctccttaggggatttttttttttaccttagttgtctgctccgctcgaaacacagagttcggtggggatgagactagattttccttcgattttccggatgtttttgagttgggtgccaaatatgttaaaagttcaatgtggtcaggcacttgcgcatgtggtggagtcgtccttctacgattttttgttggttttatatttgttgtaaatgcgtaaaattagctcccattttagtttgtttaacagaactgattacattttatattactagcatattactgatcgttgagtacggagtatatatattaaaattacagtgatccttggcctttttactctctgtttggcatttcggtggctgttcaaaagccatagtttatttcgatgtttgattaaaaattgttactataagcattttaattatagttgtaacagggaaacaaagtcatactaggattagtaaaattcccctattttgagtagactccaatgcacaatatgtcaccgactcaaccactgcagactgacccttagttctacagatttacagggagattatcttgtgatctgtaaacatgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaaggtgaggatgtgccagtgtgacatgcaattgtttgaattcagaatctctattttgtttttacatttttatgtgttttacagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttgggggtaagcaacatatgtaccctgaaattttccagcaccctcaacatttttttgtttgaactttttttttaaaaaaaaacagaattattcatgctaacttttatggttaacagggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaagggtaagcctttgtatgttattgctgcacttcaatttgctaactggaggaaatgatgtactcattatttggcaaaattattacttatcatgctctttcactttagcattatcgatacatatgattccatctagttgaaaataaggtgtaaatagttatcccgaagtgttcactgtaatttctctatattgctagtttaaatccatcaactggtgattgtatttgttttgtattttcgtgcgcacttatttctattatttttgcatgtacttgagatgcagggaaacccagttaaatgtttcggttactggataatcccttaacattatcccattccatttatgttctgtttcaacctatccataaaaaaaatcattaatgagagacctaatgctaacggatacatgcttgtgtcagccaacaatgttagaagatatccttacatttatccacactgcttctattcttgaatcttttattgaattaaaaaaaggtgcaaacgtaattttatagaacctgaaccatccccaaaagtccaaaactagtttaataagggtatcttgcacatttggggaatatgttggactccatgctaaagccaatgtttattatagtcctacatatctatactcctctaaaagaccccaatggtggtggtgagtattgaatttgccaccacccaccaccactgcatgtgggtcccccaaatagtgaggtaggtggacttttgccccttccccaacctcaagccatcaaacagaaaatttttcttttgaagtgaggtaaaaatgatgacaaataatatgactagaagattttacaatgagaataattttattaatttttgaggctgtaaagtgtatggaggagttctcttcatgttgcaatgcaggggcattcagatagtataattatagaataacatatgtagtatgtaaatcctgattaagatggctgtgaattggcctatataatgccaagcttgcaataccgactaccgaatacctagtctaattttgactgcctctgtaaatacgacatctaatgtgcaatgaaagctaacctcccattttataaagaaatagacagtgcacccaatcaaatagacagtgcctattgaaatgcttcatcccagtaaagctttaaaaataagtccagcccagttaaaacacattacacagatcaaatacatctatatggccgatttcaacccaggtttattcaccattctgaggcgtagctagctctatcaccataattagtttagtttatcattcaaaatatatacgaggcaaaattcatgttttttttgtggcccatttcaatccaggtttattcaccattctgaggggccctgtaaaattccttctataaatatagaagaggcaaaggttttgcccttcattcaaaaaaataattagtttatcatgttttttttatctgttttgagtgttgactgtagtgtttcaccttttccatcttactctctgctttcagaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcaggtatgcaacagttgctccaatttttatgctatatcttgctgcaaaattgtgatttcttaggagcctgctttatgtttgtaatgttctatacttgatcaggtgagatcataagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaaggtgaagctgatgaagctgtaagtttattttgtccatttatactagtatacatacttgcagccacatattcatccatccttgtgctaatgaatatctgtgcatgcactactttctttatctaatattttgcactgtgtgtttcatgctgttgcagcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtatctcatccccttaaaatgctagcctttttgtttgccacttcgtaattctgttttttctattcagattctaatcagttgcagacttttttaaagaattaactcaaatattttccaaacaggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaagaagtgtcactttctggcgcaagtgatgatactccatgtaaactaagtagtttttggtgagactgttcattttagtgtattttgtactagttaaattaaatagtgaatgtctaagttgtgtcgtttgatatataagcttgtgctaacaacataaggctttcttggccttcataagatatactcctacctaggagaaagtggtggatgagcattcgtttctgtttttattggtaatgaacatatttacatgttgtattgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0549600, RefSeq:Os04g0549600