Phr1 gene
Contents
Annotated Information
Function
研究人员从水稻籼稻品种93-11中克隆并鉴定了控制水稻籼粳分类的基因并将其命名为PHR1。转基因功能互补实验证明PHR1是区分水稻籼粳分类的基因。在水稻中抑制或过量表达PHR1，得到具不同抗病虫害能力的转基因水稻，表明可以利用基因工程技术调控该基因从而调节植物抗性。
Mutation
Expression
Evolution
Knowledge Extension
Labs working on this gene
References
Yanchun Yu,Tian Tang, Qian Qian, YonghongWang,Meixian Yan,Dali Zeng, Bin Han, Chung-IWu,Suhua Shi, and Jiayang Lia,Independent Losses of Function in a Polyphenol Oxidase in Rice: Differentiation in Grain Discoloration between Subspecies and the Role of Positive Selection under Domestication.The Plant Cell, 2008.Vol. 20: 2946–2959,
Structured Information
| Gene Name |
BGIOSGA000127 |
|---|---|
| Description |
Putative uncharacterized protein |
| Definition |
Oryza sativa Indica Group BGIOSGA000127, complete gene. |
| LocusTag |
P0614D08.28 |
| Ensembl Transcript ID |
BGIOSGA000127-TA |
| Ensembl Protein ID |
BGIOSGA000127-PA |
| Length |
4081 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:45466384..45470464 |
| Sequence Coding Region |
45470346..45470464,45469984..45470244,45469686..45469704,45467716..45467935,45467440..45467621 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:45466384..45470464 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:45466384..45470464 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGCTCTCTCGCTCCGTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGATCGAGATAAAATTCGGCTGCGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCTGTTCTCTCCAACTTCGCCTTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACGACGTACAGCACGGGGCTCCGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTCGTGTCCGCCTTCAACGGCTGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTTGCTTCTTGGATCACTGGCTGGTTTAACATCACGGGACAGTGGGCCGCTACCACGAGCGTGGACTTCGCGTTGGCGCAGTTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAACGGCGGTGGCTACATGGCCTCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTCATCCACGGCGCTATCAACAGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGAGCTTTTTGGAATGCGGCAGGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACGGAAAGGGCGAGCGTTGAGTTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATACGCGACAAGGCTTACATTTTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGCTACGACACATCTGCTCATATGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATCGGGATCGTAACCTCGGTTGCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTCACGTCGGCGGTGACGGACATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAACGCGGTTGCTCAAGCTTTCTACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGGATCCTCTGCTTGGGAGTCGTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACTAGCAACTCGAGGATGGCGTATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTCTGGCACCGAGTGAACAAGCAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTGGCGTTCATCATGGCTCTGACATCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCCATCGCGACGATAGGGCTCTGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACGGCGAGGGGATCCTTCGTTCCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGCTGGGCCGCCGTGCTCTGGGTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTACCCGGTGGCGGAGGAGACGTTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTCACCGTCGGCGCGTGGGCTCTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACTAATGACGGCCCGCTGTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MALSRSVEVAVPADPAGDGDRDKIRLRQLGYKQELKRGLSVLSNFAFSFSIISVMAGVTTTYSTGLRYGGPVSMTLGWLVVSAFNGCMALSMAEICSAYPTSGGLYYWSAKLAGNDWAPFASWITGWFNITGQWAATTSVDFALAQLVQVIVLLSTGGANGGGYMASNYVVLAIYGAMLVIHGAINSLPIQCLSWFGQLGAFWNAAGVFVLVALIPAVATERASVEFIFTHFNTENGMGIRDKAYILLIGLLMSQYAMAGYDTSAHMTEETKNADWSGPIGIVTSVALSTVFGWIYIVSLTSAVTDIPYLLSPDNDAGGNAVAQAFYTTFHRRYGSGLGGILCLGVVAVAVFLCGLACITSNSRMAYAFSRDGAMPFSKVWHRVNKQEVPINAVWLSVVVAFIMALTSLGSQVAFQAMVSIATIGLCISYALPIFFRVTTARGSFVPGPFHLGKYGIVVGWAAVLWVAAVTVLFSLPVAYPVAEETFNYTPVAVGGVLLLTVGAWALRARFWFQGPITNTNDGPL</aaseq> |
| Gene Sequence |
<dnaseqindica>1..119#221..481#761..779#2530..2749#2844..3025#3117..3406#3508..3637#3725..4081#ATGGCGCTCTCTCGCTCCGTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGATCGAGATAAAATTCGGCTGCGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCGTAAGGAGCAGCTTATCTTATGAATTTACCATGCGAAGCCTCGCAAACTACTACTGTTCATTGGCATCTTTGGTTAATTGTTTTTGGCCTTCGTGAGCTAGTGTTCTCTCCAACTTCGCCTTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACGACGTACAGCACGGGGCTCCGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTCGTGTCCGCCTTCAACGGCTGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTTGCTTCTTGGATCACTGGCTGGTGAGTACGTGTATGTATTGTGAATTGTCCGTCTCTCATGAACTTCTCGTTCCAAGAAATGAGGAAAGCCTTGCAAAAATTTCATACTCCAGCATCTTTTAGGCTTCGTTTAAAATAGGATATTTTTATAGGATTTTCGCGGAAATTGATCGATCGTATATAAAAATCTTGTAAAACTCGCACATTCCAAAAGAGACCTTTATTTTCTCAAAAAGAAAAAAAGAGAGAAAGACCTTTATCTCTTGTTCTGTTTTTCATTCCTTGTGTTCTGCTTTGCAGGTTTAACATCACGGGACAGGTAGGTACATTCGGATTTCTGGGCCCGGGCTTCTCGCTAATTGATGGGCCTTTTTATTGGGCCATGAGTACAGAAAGGAATAAGTTCACTTTGGGTCCCTTTATTTGTTGCCCAGTCCGATTTTCGTCCCTTAATCACAAAACCGGGTACGACGGATCCCCTAACTTACGAAACCGTTTAAATTCCCTCGGCAGTATTTGACTCTGGTTTTGGCTGAGGTGGCACCGACGTGGCTTCTTTTGACTAGATTTTTGTCCAACGTGTTATTGACGTGGCGCTGATGGGGCAATTAGATCCCAAAAAAATAATAAAACTTATGGGGCCCACATGTCAGTTGCACACACAAATTAATAAAAAAGGTGGGCCCATGTGGACCCACACGTCATCCTCACAACCTCTTCTCTCTGTCCCCTCTCTCTCCCTCTTGTCTCTCTCCCGCTCATGGGCGGCGGAGCGACGAGGAGGCTGGCTGGAACGGCGCACGGCGGCCGAGCGACGAGGAGGCTGGCTGGAGCGGGCGACGGCGTGGCGGCGCTGGGGGGGCGGGGGTGGACGGAGCGGGTGCCCCGGCGCATGGCGTAGAACACCTCCTGCTCGAACGCCGGGTCGCCGTCGGCGAGGAGGCGGTGGACGAGCACCAGCATCTTGAGCGTGACGCCCAGGCAGCGTGACAGCGACGCGACGCAGGCGCGGGAGTGGAGCGTGAGCGCAATCACCTCCCGGACGTGGTGCTCATCGGCGGGGAAGCCATGGACGGTGTGGGAGAGGTCACGCTTGACCTCTTGACACATGGATACTCTCGTTTAATTATCTCGTTATTACAAACATGGTTAATTACAACTTCCAAATAAAGATCAAAGCAGACATATTATGTTAAACTTGTGCCTGCAAAAGCTGTTTTATTCAGTTAGGATAGTACTTTCCTTTTATGCACGTTATGTGTTTTAGCCTTTTAGGCTAGCTAATATTATTACTTGTAGTACTAGAACACATGCAGGAAATCTTAGCCGATTGCATGCTACTGAGCTACTCGATCGCTCATGGATTGATTGAGACGCCAGAGCTACACCTTGGTGTCCGCCTTGCCGCTGGTCGTCGAGTCATCGGCGCTGCCGCCGTCGGCGACCTTGTTGTTCCTCCCCTCGGCCATCTCCACGTCGTCGTCGCCGGCCTGCTTGCCGCGATTGCCGCGGCGGCGGCGAGGAGGAAGACGAAGATGCTGGCGGCAGCAGCGGCGGCGAGGAGGAAGACGAAGATGCCGGCGGTGGCGGCGCGCTGGGGGTGGTGTCGGGTGTGGGGGATGCGTTCGCCCCGCCTCGCCTCCTTCCCCCTGCGCACATGAAGAAGAGAGGACGATGAATATGAGAGAGAAGGGAGGGGGAAGAAGGGAGGAGTAGCTGACATGTGGGCCACCATTTTAAAATTATTATTTTTAGCTGACATGCGGGTCCCATGTTTTTTATTATTTTTTCGAGATATAATTGCCACGTAAGCGCCACGTCAATGCCACGTGGGACGAATATCTAGTCAAACAAGCCACGTAGTCGCCACATCAGCCAAAATCACCTTCAAAACCGCTGAGGGACCTCGTCTACACGGTTTTTGTAAGTTGGGGGATGGGTCATACCCGGTTTTGCGGTCAAGAACGAAAATCGGACTGAGTGACAAATAGAGGGACTCAATGTGAACTTATTCCGTACAGAAAAGCCTAACAGTGGGCTGACGCTATATGGATCTCTTGATGACATAGTGGGCCGCTACCACGAGCGTGGACTTCGCGTTGGCGCAGTTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAACGGCGGTGGCTACATGGCCTCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTCATCCACGGCGCTATCAACAGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGAGCTTTTTGGAATGCGGCAGGTAATGAAATTATTTTTTTTCCTCCTCTTGCAATCGATCTCCTTATTAAGTCACCATCGATTCCATCATCACTCTATTGTTCTTCGTTTGCTAGGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACGGAAAGGGCGAGCGTTGAGTTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATACGCGACAAGGCTTACATTTTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGCTACGACACATCTGCTCATATGGTACGTTGCGATTTCGCCCCTAGACACAGTAGTCCATATCTAAACTGCAAATACTACTGACACTCTGACAGTATATCATTCTATGCATCAGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATCGGGATCGTAACCTCGGTTGCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTCACGTCGGCGGTGACGGACATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAACGCGGTTGCTCAAGCTTTCTACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGGATCCTCTGCTTGGGAGTCGTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACTAGCAACTCGAGGTCAGATCGATCGATCAGCTGACGTGTTCAGGAATTTAGCTTAGCTTAATTAGCTACGTACATGTTGATAATTTCCTAGGTTAATTAGCCACTGCATGCAGGATGGCGTATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTCTGGCACCGAGTGAACAAGCAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTGGCGTTCATCATGGCTCTGACAGTGAGTTAATTCGTACCACTGCTGATTAATTTTCATGCTTGATTCTCAGTTCAGAATAACCAGAATTATGCTTTATTTTTATGACAGTCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCCATCGCGACGATAGGGCTCTGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACGGCGAGGGGATCCTTCGTTCCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGCTGGGCCGCCGTGCTCTGGGTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTACCCGGTGGCGGAGGAGACGTTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTCACCGTCGGCGCGTGGGCTCTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACTAATGACGGCCCGCTGTGA</dnaseqindica> |
| External Link(s) |
