Os04g0552700

From RiceWiki
Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0552700| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001060040.1 GI:115459809 GeneID:4336606| Length = 133...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0552700

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001060040.1 GI:115459809 GeneID:4336606

Length

1338 bp

Definition

Oryza sativa Japonica Group Os04g0552700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28073810..28075147

Sequence Coding Region

28073887..28074822

Expression

GEO Profiles:Os04g0552700

Genome Context

<gbrowseImage1> name=NC_008397:28073810..28075147 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28073810..28075147 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagaacacatgcaagctctgctaccgccgcttcggcaacccccgcgccctcgccggccacatgcgctcccactcagtcgccgcctcgaggtcgcagatctcctcgacgtcctccgcgtccacatccgtcgcggtcggcgacgacgacggcggcggtgatgccaagaggcccatccagggatacgtgctgcgggagaagcccaagcggagggtccgcctcgccgagtccgacttctcggatcgcgagagcgagacggagtactactcctcgccgcctcacggcaagcgcgcgaacaccggatcgggcgatgtcgagcaggtgagctcggtgtccgacgccacgtcggaggaggacgtagcgctgtccctcatgatgctctcccgcgacacctggccagccacgccgccgccgccgccgccctaccgtctccgcggcgcaggctacgacgacgggagcgacggtggcgacgcacctccggctccggccgcagcggccgcgcagaagcggacgcggttccagtgccccgcatgcaagaaggtgttccgatcgtaccaggccctcggcggccatcgcgctagccacatgcgcggcggcaggggcggctgctgcgcgcctccgcctaaccctcctccttctcccgctacgcctctccagccattgccggagtgcgacggcggcgaggaggagggcgcgaagccgcatccgcacgagtgcccctactgcttccgcgtgttcgcgtccggccaagctctgggcggccacaagcggtcccagctgtgctcagccgcggcggcggccgcatcgggcgacgatattccagccatgattaaaagcaacggcttcattgatctgaacctcccggcgccgttcgacgacgtggagctctccgccgtttcagatcctttcctctcctcgaagccaggttcttga</cdnaseq>

Protein Sequence

<aaseq>MAKNTCKLCYRRFGNPRALAGHMRSHSVAASRSQISSTSSASTS VAVGDDDGGGDAKRPIQGYVLREKPKRRVRLAESDFSDRESETEYYSSPPHGKRANTG SGDVEQVSSVSDATSEEDVALSLMMLSRDTWPATPPPPPPYRLRGAGYDDGSDGGDAP PAPAAAAAQKRTRFQCPACKKVFRSYQALGGHRASHMRGGRGGCCAPPPNPPPSPATP LQPLPECDGGEEEGAKPHPHECPYCFRVFASGQALGGHKRSQLCSAAAAAASGDDIPA MIKSNGFIDLNLPAPFDDVELSAVSDPFLSSKPGS</aaseq>

Gene Sequence

<dnaseqindica>78..1013#ctccgtttcctctgaaagctcgtatttttagctctcctaagctctgtgcctcatcaagctctatccaagctctcgccatggccaagaacacatgcaagctctgctaccgccgcttcggcaacccccgcgccctcgccggccacatgcgctcccactcagtcgccgcctcgaggtcgcagatctcctcgacgtcctccgcgtccacatccgtcgcggtcggcgacgacgacggcggcggtgatgccaagaggcccatccagggatacgtgctgcgggagaagcccaagcggagggtccgcctcgccgagtccgacttctcggatcgcgagagcgagacggagtactactcctcgccgcctcacggcaagcgcgcgaacaccggatcgggcgatgtcgagcaggtgagctcggtgtccgacgccacgtcggaggaggacgtagcgctgtccctcatgatgctctcccgcgacacctggccagccacgccgccgccgccgccgccctaccgtctccgcggcgcaggctacgacgacgggagcgacggtggcgacgcacctccggctccggccgcagcggccgcgcagaagcggacgcggttccagtgccccgcatgcaagaaggtgttccgatcgtaccaggccctcggcggccatcgcgctagccacatgcgcggcggcaggggcggctgctgcgcgcctccgcctaaccctcctccttctcccgctacgcctctccagccattgccggagtgcgacggcggcgaggaggagggcgcgaagccgcatccgcacgagtgcccctactgcttccgcgtgttcgcgtccggccaagctctgggcggccacaagcggtcccagctgtgctcagccgcggcggcggccgcatcgggcgacgatattccagccatgattaaaagcaacggcttcattgatctgaacctcccggcgccgttcgacgacgtggagctctccgccgtttcagatcctttcctctcctcgaagccaggttcttgaaagcaagcagagcatgagagagcgagcatactggctgttcagtgctctctctcctttcggttgattccaaagaagatggttagagctatggattcgagagaaagagctgcttaaccaggcagccgaaaaggtaaagaaaatatcataaaaaggagacatctttgctttggtagttttttttttctcagttgttttgttcattcagctacaaaaattgcttgatgctgtcctccattctgttctgtctttttgtttgtttcaagctacccgaacagtgtacattggggcaactagcagagcttagcatcttgcttacttcttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0552700, RefSeq:Os04g0552700