Os04g0555300

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Revision as of 11:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0555300| Description = Major facilitator superfamily protein| Version = NM_001060050.2 GI:297603144 GeneID:4336618| Length = 3559 bp| Defi...")
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Gene Name

Os04g0555300

Description

Major facilitator superfamily protein

Version

NM_001060050.2 GI:297603144 GeneID:4336618

Length

3559 bp

Definition

Oryza sativa Japonica Group Os04g0555300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28182083..28185641

Sequence Coding Region

28182485..28183050,28183281..28184262

Expression

GEO Profiles:Os04g0555300

Genome Context

<gbrowseImage1> name=NC_008397:28182083..28185641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28182083..28185641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttccccaagcaaaacacgtcggatgaagccattggggattcagctatatgagtgtgcccgggggagtcctatctccttcagatcatgccaggctcttgtattgatactgacgttcttatcctatgctagctatcatgccactaggaagactacaagcattgtcaagagtgttcttgatcctaagacagaaaacctaggtatgttgcattggccgagccatctgtatcttcaggatttaagagatgcacagggcaacatgacggctctctatagcggctgggctccgtttaatgccgacgatggtactgcattgctcggggagatcgacttggcatttctcggagtatatgcaatcggcatgttcttcgctggccatttgggtgatcgggtggatctcaggatacttctgaccatcggaatgataggcactggatttttcactgctgcctttggtgccggcaactggctcaacatacacaacttctactactttctgggtgttcagatgatggctggcctgtttcagtcatccggctggccatctgtggttgcagttgttggtaattggtttggaaagagcaaaagagggctgataatgggaatctggaatgctcatacatctgtgggaaacatatctggttccttaattgcagctgcaatgttgaagtttggatggtcatggtcgtttgcagtccctggagtgatgatcgcagtcgttgggcttgcagtgtttctgttcttgcctgtcggtccggagatgattggaatcgaggaggatatccatgagaaggatgctgagaaggatgacatgagtgcacctctgttggaagaacgatcggcatcaaaagaaaaggcagtcgggttcattcaggcttggagaattcctggtgtagcgccatttgctctctgccttttcttctgcaagcttgtggcttacacattcctgtattggcttccgttttatatcagccacacagcaatcggtggagtgtacttgtcagacaccgcagccggtgtactgtcaactctgttcgacgtgggtggcgttgtcggcggcatccttgccggccacatctccgaccgcctcgacgcacgggcgctgacggcggcgagcttcacgttctcggcgatcccggcgctcttcttctaccgcatatacggcagcttctcgctgtactcgaacatcgccctcatgttcgtcaccgggatgctcgtcaacgggccgtacgccctcatcaccaccgccgtctccgccgacctcggcacgcacagctccctgaacggcaactccagggcgctcgccaccgtcacggcgatcatcgacgggacggggtcgatcggcgccgcggtcggcccgctgctgacggggtacatctctgccaagagctggagcggcgtgttcacgatgctcatggcgtccgctttcgtcgcggggctgctcctgtcgaggctggtcatggcggagatctccgcgaagatggagtcccggaggcctgacgctgctgctagtgatctgccagtgtcctccatggaacaatcttag</cdnaseq>

Protein Sequence

<aaseq>MGSPSKTRRMKPLGIQLYECARGSPISFRSCQALVLILTFLSYA SYHATRKTTSIVKSVLDPKTENLGMLHWPSHLYLQDLRDAQGNMTALYSGWAPFNADD GTALLGEIDLAFLGVYAIGMFFAGHLGDRVDLRILLTIGMIGTGFFTAAFGAGNWLNI HNFYYFLGVQMMAGLFQSSGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNISGSLI AAAMLKFGWSWSFAVPGVMIAVVGLAVFLFLPVGPEMIGIEEDIHEKDAEKDDMSAPL LEERSASKEKAVGFIQAWRIPGVAPFALCLFFCKLVAYTFLYWLPFYISHTAIGGVYL SDTAAGVLSTLFDVGGVVGGILAGHISDRLDARALTAASFTFSAIPALFFYRIYGSFS LYSNIALMFVTGMLVNGPYALITTAVSADLGTHSSLNGNSRALATVTAIIDGTGSIGA AVGPLLTGYISAKSWSGVFTMLMASAFVAGLLLSRLVMAEISAKMESRRPDAAASDLP VSSMEQS</aaseq>

Gene Sequence

<dnaseqindica>2592..3157#1380..2361#gaggcgactccagaaagcttcccctccgcggtccgctcgcctcctcacggcgccaaagcagccaggaagaagaagaaccacgctgtttctaggacgattcctggaacagccaacttctgaacctctatctgcaagactgcaggtaatttgcatgctccatctgatcaaatctcttcgcctcctctcctggcttaaatttcccattttctaggataaatctcctctctttttattgatcttccatccgtctagaaaaaaactagattctggtcggccaaacgggatcgcctcgtctgccttatttatttgccttgcaaatttgaggggcctgatttaactctctttctatggacccctgttcttctgcttgcttccagagagtgcgatcctctggttgcgtctgttttattcgcttgcttgcaagagcaggacccgtcttgctttctccttgcattcttgctgttgagttaacaagggatccatagggcacaggtattagtgtggagtatttgttttctctccagttgccttctgttcttcccgtttctgaatcgattcttctttcggtttctgaatcggaagtaagatgatgctatggttgaaggagatttttgtttcttgtccctccaattgttgagttgattgaattatagttctcttcttccgttttcctcttggtccttgaacttgattatttgtaattttagacaatgggtagtaaaaaagatttagacaatggaatgatgccttcagaacttcttgccaagataggaacctgaccaaacggcggttcttgattttgtagcattaaaacatagggccttcacagttaaacttcaggtcgctgtgtattgtcaattcatagggccttttgctcgttcaacgcatatcaactaatcggaactggtcgtcaactcctgtattttccttttgctcgtgatgaaacgggaaatcccacttgggcaagaaaagaaagtgtcggttctgaatatcgtaacatcctacctaatcgcacgaatagcgaagtgcaaggtagtttatgcaattcgtctttatacaatttttaaattatgaccaacttaacttatcgtccacattaaactacgtgcagtcgtcgccccaataatttggcaaaatattgttcatttcgtcagatgcttgcgtgttccttgcagaataagctctatagctttcaccgtgtccatttgctgccgaacaattgtgaaccagaagttccctattccatttgtgtcaagctgttaaattttgtggtcctgtggacaactcctgatgatttctcttttggccttttgcagacagtataatacttcttcctggttgcagccgcctcagcggaaaaaccaaattcagcttcattcatgggttccccaagcaaaacacgtcggatgaagccattggggattcagctatatgagtgtgcccgggggagtcctatctccttcagatcatgccaggctcttgtattgatactgacgttcttatcctatgctagctatcatgccactaggaagactacaagcattgtcaagagtgttcttgatcctaagacagaaaacctaggtatgttgcattggccgagccatctgtatcttcaggatttaagagatgcacagggcaacatgacggctctctatagcggctgggctccgtttaatgccgacgatggtactgcattgctcggggagatcgacttggcatttctcggagtatatgcaatcggcatgttcttcgctggccatttgggtgatcgggtggatctcaggatacttctgaccatcggaatgataggcactggatttttcactgctgcctttggtgccggcaactggctcaacatacacaacttctactactttctgggtgttcagatgatggctggcctgtttcagtcatccggctggccatctgtggttgcagttgttggtaattggtttggaaagagcaaaagagggctgataatgggaatctggaatgctcatacatctgtgggaaacatatctggttccttaattgcagctgcaatgttgaagtttggatggtcatggtcgtttgcagtccctggagtgatgatcgcagtcgttgggcttgcagtgtttctgttcttgcctgtcggtccggagatgattggaatcgaggaggatatccatgagaaggatgctgagaaggatgacatgagtgcacctctgttggaagaacgatcggcatcaaaagaaaaggcagtcgggttcattcaggcttggagaattcctggtgtagcgccatttgctctctgccttttcttctgcaagcttgtggcttacacattcctgtattggcttccgttttatatcagccacacaggttcgtccctcctttttccgagaaaaggttcccctagtcttgtgtgcaatttcaatatcatactgattttttttcctcataccaaattaatcttttacctcatgattttgaaccaaaccattctgtcatgtactagtatgaactgcactttgtttttggtgtaatctgatgtgtattagcactaagaatgataatgtacctgacaatgccaatatgtttccatttttcagcaatcggtggagtgtacttgtcagacaccgcagccggtgtactgtcaactctgttcgacgtgggtggcgttgtcggcggcatccttgccggccacatctccgaccgcctcgacgcacgggcgctgacggcggcgagcttcacgttctcggcgatcccggcgctcttcttctaccgcatatacggcagcttctcgctgtactcgaacatcgccctcatgttcgtcaccgggatgctcgtcaacgggccgtacgccctcatcaccaccgccgtctccgccgacctcggcacgcacagctccctgaacggcaactccagggcgctcgccaccgtcacggcgatcatcgacgggacggggtcgatcggcgccgcggtcggcccgctgctgacggggtacatctctgccaagagctggagcggcgtgttcacgatgctcatggcgtccgctttcgtcgcggggctgctcctgtcgaggctggtcatggcggagatctccgcgaagatggagtcccggaggcctgacgctgctgctagtgatctgccagtgtcctccatggaacaatcttaggctccattagacactttggaaattgtgtcactggtgaaatgctgagaaattttacaagcgaaaaagcctgaaaatggagacttgagagtgtggcaggaagagcaaacccctcacaaattcccttttttttttacacctgaggagcaaggtgctctctccagccccaggattggtcgtggctatgagcgatttctgttgcttgtgatgtgtatatggaactcctaccgtatgaagtgatgattgtcaactctagctgttgacaaaggcgcgcgtgtggaatgcgggaggttttccggatttctgtatagcgagttataatcgggctcttaaagcttgtgcgagaatgcagcagaagtgttggttcctatcagatgctaatgtaatcttgctgattcaccggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0555300, RefSeq:Os04g0555300