Os04g0555800

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0555800| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001060055.1 GI:115459839 GeneID:4336623| Length = 247...")
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Gene Name

Os04g0555800

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001060055.1 GI:115459839 GeneID:4336623

Length

2470 bp

Definition

Oryza sativa Japonica Group Os04g0555800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28219172..28221641

Sequence Coding Region

28219303..28219526,28220150..28220243,28220418..28220509,28220626..28220764,28221326..28221610

Expression

GEO Profiles:Os04g0555800

Genome Context

<gbrowseImage1> name=NC_008397:28219172..28221641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28219172..28221641 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacaagcggcagcgggaagcgcggaagcgcttccgcgaggcgaacccgggcctcttccccgccaacccgacccctcccgccgacggcaccaagaagaagaagaacaacaagaagagcatgttcaagaagacgagtaaggcgggtgggggaggcgcggggaggtcgaagcacccgctccgggtccccgggatgcggcccggggagcggtgcttcatctgcaaggccgcggaccacgtcgccaaggtctgccccgagaagtccctctgggagaagaacaagatttgcttgctctgcaggcaacgaggtcatagcctgaagaattgccctgacaaaaatgatgaaaatttgaagaaattctgttataattgtggtgaatctgggcactcactttccaagtgccccaaacccattgaaaatgggggtacaaagttcgcaagctgttttgtctgcaaacagcagggacatttgagcaagaattgtcctgaaaacaaacacggcatttatccaaagggaggttgctgtaagatatgtggtgaagttacacacctggccaagcattgtccaaacagagggaggcaagacttgatatcttctggggatgatgctttcaatacggaggagcatcacctggaagacaatgctgttctccggggtggagatgaccttgatgacgattttattgaagaagaagaaacaagacacaccaaggcaaagaaggctaaacaatctagttcaaaatctaccacagagacaggcgatggtgacaagaataccaacactaaggcaaaagtaaaacaagctccgaaagttgtaaaattctttggttaa</cdnaseq>

Protein Sequence

<aaseq>MANKRQREARKRFREANPGLFPANPTPPADGTKKKKNNKKSMFK KTSKAGGGGAGRSKHPLRVPGMRPGERCFICKAADHVAKVCPEKSLWEKNKICLLCRQ RGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSK NCPENKHGIYPKGGCCKICGEVTHLAKHCPNRGRQDLISSGDDAFNTEEHHLEDNAVL RGGDDLDDDFIEEEETRHTKAKKAKQSSSKSTTETGDGDKNTNTKAKVKQAPKVVKFF G</aaseq>

Gene Sequence

<dnaseqindica>2116..2339#1399..1492#1133..1224#878..1016#32..316#gacggcgagagagcgtccgtagcccaaggcgatggcgaacaagcggcagcgggaagcgcggaagcgcttccgcgaggcgaacccgggcctcttccccgccaacccgacccctcccgccgacggcaccaagaagaagaagaacaacaagaagagcatgttcaagaagacgagtaaggcgggtgggggaggcgcggggaggtcgaagcacccgctccgggtccccgggatgcggcccggggagcggtgcttcatctgcaaggccgcggaccacgtcgccaaggtctgccccgagaagtccctctgggagaagaacaaggtatctgcctaccaccattcgtctcaaaatccctgccttttgcaagctcttggggataatttttgctcggcccaatgtcttttgctatagaagccatggacctaagaacgtcaattaaggtgaccttaggtttagatcagcatttgtactttctgactttctgttattattgggggttaaaaccaacgaaatcagtatgggttttctgtttattgttctgtttatgccttgttctgtttaatgttgcggggtgttatttacgttatgcaatacctagcagtgggcactgggcagtgcgtgtattggttgttctgtatttttttgttttatcacacgttgtatctatctctaggtgaatggcaaaacggtgacttctggaggccatcctgataagtgttttactgcttccattccaacctttaatcagtggattctggctgtcacagttatatattttcagtcagtagtattttttttttcagtacttagttgcctcaaagtctgaccagttcatttgtggttttcaagctaaaatttaatatttatattttcttctttcagatttgcttgctctgcaggcaacgaggtcatagcctgaagaattgccctgacaaaaatgatgaaaatttgaagaaattctgttataattgtggtgaatctgggcactcactttccaagtgccccaaacccattgaaaatggtaaataatacatcctttcatctcatacagttgccagtttccatactcgatacctgcaaatagttaccctcagccatatgatttcctcgcacatttagcatgatttttgcatacagggggtacaaagttcgcaagctgttttgtctgcaaacagcagggacatttgagcaagaattgtcctgaaaacaaacacggcatttatccaaaggtattatcagatactctgttgtcccttatcaccacaagatcttggactgagataacattctgcatttaggggctcaaaatgtccactttgaaggatgttctgcttgcattatctttcctttatttagttgcatgtctccattacgtgtggattctaactctatacatttgttagggaggttgctgtaagatatgtggtgaagttacacacctggccaagcattgtccaaacagagggaggcaagacttgatatcttctggggatgatggtaaacacaaacctcaactgtaacattttgtgggaactgtcttaacattcctccacggtatcatgtgtattgtacttttgctgattcattttaaaaaatttggaactttcactaacttcttgtagctgatctttgtatccacttgttattaatactgtttacatttagtaaataaccattgaagtgttttcatggatgtatagaccatacgcttgttttgacaatacattggagaaagaagaacagattatgtttaccttttctatccatgtgagaattaaggattaatacttagatgtaagcatttggctaaccttatgaggagaaaatgactagcctgccaggcgtgcctcttttgttttgttaaagaaacataacatgatgctatactgtaacatagaatctgtgccgatgggtaattgggtgaatacgcctttagtagtagcagtctggctaaggcgccaagcagatgccatcatgctaatgtgtgagataagttatgatttcttatatgtttgagatggtctataattttgtccgatggtgctatcaaacatctggtaacttttttccgtacagttattagtagccgctcatttatttggtcttctgcttatttctagctttcaatacggaggagcatcacctggaagacaatgctgttctccggggtggagatgaccttgatgacgattttattgaagaagaagaaacaagacacaccaaggcaaagaaggctaaacaatctagttcaaaatctaccacagagacaggcgatggtgacaagaataccaacactaaggcaaaagtaaaacaagctccgaaagttgtaaaattctttggttaaactatgtaacctttgtagcttaccagtaatgatacagaagaagatccttccgaacattttgtctattgggggatcacggttttgtaacgtacaacgggaatttaatatgatctactgttcaatgttttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0555800, RefSeq:Os04g0555800