Os10g0126500

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0126500| Description = Cyclin-like F-box domain containing protein| Version = NM_001070616.1 GI:115480975 GeneID:4348018| Length = 3134 bp|...")
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Gene Name

Os10g0126500

Description

Cyclin-like F-box domain containing protein

Version

NM_001070616.1 GI:115480975 GeneID:4348018

Length

3134 bp

Definition

Oryza sativa Japonica Group Os10g0126500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1660101..1663234

Sequence Coding Region

1660382..1660729,1660826..1660981,1662122..1662994

Expression

GEO Profiles:Os10g0126500

Genome Context

<gbrowseImage1> name=NC_008403:1660101..1663234 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1660101..1663234 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagagccgcctggcaagaaaggtccggccatggaccccgcgcaagactcgggcagggactggctcagcggcctccccgagggggtcctccaccgcatcatgtcgttcctggactctcgccaggccgtgcggacgtgcgtgctctcgcggcgctggcgcgacctctggcgctccgtgccccgcgtccacgccgacatctgcgatctcatcccggacaggatcatcgacgtcgagggagagaaggccaagatggtggtgttcaacagcttcgtcaaccggctgctggagcgacgcgatcccaccgcctcaatagagacgttcttctgcagatgctgcataccagacgaagacggccatggatcggcagacgcgaacaggtggatttcctacggtttgcagaagaacgcctggtttctggaggttgtcatgctgctcaaaccattggagctcgatccctcggtgttcagttcaatctacctgagaagaattgccttcgacaatgttttcatggaccaaggtttcttcaagcaactccagatgggctgtccagcattggaacgtttcgacttagatggttgcatcgttgcggatgacgagatctcctccaacacactgaaggttttgaccttcgatactactaaattctgctatgagtacaggatatctatttctactccgacagttactactttgggcctgcgcaatactattggcggcaagcctgtactgaaggacgtggcatcactagtgagcgcatcagtggtactttattgtgtggaaaccagcgatttcgatgctaatgatctccgccactatctctggagcttttctcacgttaaagatttgattttcagttatcaggggaaaaagttgacaattgaaaacaatttgcaatggtgtccaaagttcttcaatcttgtcggcttgactctgggcaaatggtgtctgaatgcaaacttctatgcactaattgtcttccttcagaactcaccaagattggagaaactgaccctgatactcgcagaggataattggaaaacaacagaagtattcatcggtgatcttgaagaaagatcgtttacatgtgagcaccttacgagtgttgaagtcaaatgctgggaggatgatcccctggtgaacgtggttgacttctttgttggtagtggaatgtcttctgctcagattcatatcgaatacgaagacaatgatgaggatcaatttcatattgaatccgataacatggttgggtttgagcttgaggacgaggacgaggacgaggacgaggacgaggacgaggacgaggacgaggatgatgaggacgaggacggggatgaggatgagcaacgttcactttttcaatctaaggacgtatga</cdnaseq>

Protein Sequence

<aaseq>MEEPPGKKGPAMDPAQDSGRDWLSGLPEGVLHRIMSFLDSRQAV RTCVLSRRWRDLWRSVPRVHADICDLIPDRIIDVEGEKAKMVVFNSFVNRLLERRDPT ASIETFFCRCCIPDEDGHGSADANRWISYGLQKNAWFLEVVMLLKPLELDPSVFSSIY LRRIAFDNVFMDQGFFKQLQMGCPALERFDLDGCIVADDEISSNTLKVLTFDTTKFCY EYRISISTPTVTTLGLRNTIGGKPVLKDVASLVSASVVLYCVETSDFDANDLRHYLWS FSHVKDLIFSYQGKKLTIENNLQWCPKFFNLVGLTLGKWCLNANFYALIVFLQNSPRL EKLTLILAEDNWKTTEVFIGDLEERSFTCEHLTSVEVKCWEDDPLVNVVDFFVGSGMS SAQIHIEYEDNDEDQFHIESDNMVGFELEDEDEDEDEDEDEDEDEDDEDEDGDEDEQR SLFQSKDV</aaseq>

Gene Sequence

<dnaseqindica>2506..2853#2254..2409#241..1113#gtcttcttcctcttcacagcccaaaccaatcgaggtttgcttcttcctttcttccaatcatcgtttcttgcatctgatctctattctctcctcgatcgccagagctgcggcgttgtcgaatcttgctgacggttgatctgctgcttgcttggtttcttggttttcccctctttgcagcttccacgcgcgccacctgttcgacgaaaggcgtctgagcgggtgctcagcgcgtcggtggccatggaagagccgcctggcaagaaaggtccggccatggaccccgcgcaagactcgggcagggactggctcagcggcctccccgagggggtcctccaccgcatcatgtcgttcctggactctcgccaggccgtgcggacgtgcgtgctctcgcggcgctggcgcgacctctggcgctccgtgccccgcgtccacgccgacatctgcgatctcatcccggacaggatcatcgacgtcgagggagagaaggccaagatggtggtgttcaacagcttcgtcaaccggctgctggagcgacgcgatcccaccgcctcaatagagacgttcttctgcagatgctgcataccagacgaagacggccatggatcggcagacgcgaacaggtggatttcctacggtttgcagaagaacgcctggtttctggaggttgtcatgctgctcaaaccattggagctcgatccctcggtgttcagttcaatctacctgagaagaattgccttcgacaatgttttcatggaccaaggtttcttcaagcaactccagatgggctgtccagcattggaacgtttcgacttagatggttgcatcgttgcggatgacgagatctcctccaacacactgaaggttttgaccttcgatactactaaattctgctatgagtacaggatatctatttctactccgacagttactactttgggcctgcgcaatactattggcggcaagcctgtactgaaggacgtggcatcactagtgagcgcatcagtggtactttattgtgtggaaaccagcgatttcgatgctaatgatctccgccactatctctggagcttttctcacgttaaagatttgattttcagttatcaggggaaaaaggtatgcttactgatcttacatattccaccttgtcttatgcatcttgacttaggtgtcaatgcgaaaaggtgaagtgtctcttcttgatacttcacaattacatgacattgtttacctgtcccctgcaaaactaactgttgctaactaaatcttatgtcgtgaaatcatgacatatcaataggataactgatgttatatcaaccactcatctaatatagttcatgtactctgtttcgtttctatataaaacaacatgttgatcacttgacctaaagcatcttagttggcagttcgatttcagaatggaactggagtatttgctgtttgatgattgacatgtgttttgtgtggctgcaatatttgggttggaaactgaaaatgcatcatgtccaaaatctgagtaatggtttaacttcaattgacattactgcatatatatttctttcctgagaggaatactacacatatatttcaaaattatgagacattcaaagtcaacaaatgaatggaaaaaatgcttcagcaatttttcagtgtcttactcctgctgctacctcctgatacatttgcctattgtgtgtcgactggcttagctagttagctactccctccgtcccattataagcgcagttgtgggtttcagtgcccaattttgaccatttgtcttatttgaaatatttttatgattagtatttttattgttattagatgataaaatatgaatagtactttatgcatgacttaatttttaaaattttttcataattttatcaaataagacgaatggtcaaatttgggtacggaaacttatggctgcacttataatgggacagaaggagtacccaacttgcatggaaaaaagcctgataaataattcacacatgctctatagactttacttgggaccaaacaagtatggcaatgtttaatttggtttttggcagtcataatatctttcttctttccttgtggtcttttactatccattatgttgaagctatattgtacctgtagtgcaaccagaatacttgtcacataatgttcatgctctcaagtttttctttggcaagttttgtgaaattttatctataatatgtcattgcatttatgtagccacataatcactccagtcttgtgcagttgacaattgaaaacaatttgcaatggtgtccaaagttcttcaatcttgtcggcttgactctgggcaaatggtgtctgaatgcaaacttctatgcactaattgtcttccttcagaactcaccaagattggagaaactgaccctgatactcgcagaggtaaaacaatttgaaatgtatcatgcatatgtgaaagcttttgcacgagtgcacatgccattagaggatatagcttacctgttttcctttctgtaggataattggaaaacaacagaagtattcatcggtgatcttgaagaaagatcgtttacatgtgagcaccttacgagtgttgaagtcaaatgctgggaggatgatcccctggtgaacgtggttgacttctttgttggtagtggaatgtcttctgctcagattcatatcgaatacgaagacaatgatgaggatcaatttcatattgaatccgataacatggttgggtttgagcttgaggacgaggacgaggacgaggacgaggacgaggacgaggacgaggacgaggatgatgaggacgaggacggggatgaggatgagcaacgttcactttttcaatctaaggacgtatgaaacgtcaaaggggcacattccgtccaaaagatcgctctcttccgtcttcctcctttgattccagttgacttcgaaagcacagagacatgtttactgatcttctttggagctaggacgtgaagaatcatgtctttcgttgcatataagttcagtcgtcttttgcttgcttgcttctgtgatattccaagaaccaagactatgtgctacatgtttgaatactttattaggcctttatatatgttttgcaaagacgtgatattaaaatcccatatcgtgctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0126500, RefSeq:Os10g0126500