Os04g0560100

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0560100| Description = Cytochrome P450 family protein| Version = NM_001060078.1 GI:115459885 GeneID:4336648| Length = 2095 bp| Definition ...")
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Gene Name

Os04g0560100

Description

Cytochrome P450 family protein

Version

NM_001060078.1 GI:115459885 GeneID:4336648

Length

2095 bp

Definition

Oryza sativa Japonica Group Os04g0560100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28460047..28462141

Sequence Coding Region

28460206..28461843

Expression

GEO Profiles:Os04g0560100

Genome Context

<gbrowseImage1> name=NC_008397:28460047..28462141 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28460047..28462141 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggggacgtgggcggtggtcgtggcggccgtggccgcgtacatggcgtggttctggaggatgtcgcgcgggctgagcgggccgagggtgtggccggtggtggggagcctgccggggctggtgcggcacgcggaggacatgcacgagtggatcgccgccaacctccgccgcacgcggggcacctaccagacgtgcatcttcgccgtgcccgggctggcgcgccgcggcgggctggtcacggtgacgtgcgacccgaggaacctggagcacgtcctcaagtcccggttcgacaactaccccaagggccccttctggcacggcgtgttcggggacctcctcggcgacggcatcttcaactccgacggggagacgtgggtggcgcagcggaagacggcggcgctggagttcaccacgcgcacgctgcgcaccgccatgtcgcggtgggtgtcgcggtccatccacagccgcctgctgcccatcctgtccgacgccgccgcggccggtggcggtggcggcggcgccaccgtcgacctccaggacctcctcctccgcctcaccttcgacaacatctgcggcctcgcgttcggcaaggaccccgagacgctcgcccgcggcctgccggagaacgacttcgcctcggcgttcgaccgcgccaccgaggccactctcaaccgcttcatcttcccggagtgcgtgtggcggttcaagaagtggatggggctcggcatggagaccacgcttgcgcgcagcgtccagcacgtcgaccgctacctctcggcggtcatcaaggcgcgcaagctcgagctcgccgccggcaacggcaagggcgacgcgtcgtcggccacgccgcacgacgacctcctgtcgcgcttcatgcggaaggggacctactccgacgagtcgctgcagcacgtggcgctcaacttcatcctcgccggccgcgacacctcctcggtggcgctctcctggttcttctggctggtctccacccaccccgccgtcgagcgcaagatcgtccgcgagctctgcaccgtcctggccgcgtcgcgcggcgccgacgacccggcattgtggctcgccgcgccgctcaacttcgaggagctcgaccagctcgtctacctcaaagcggcgctctcggagaccctccgcctgtacccctccgtgccggaggactccaagcacgtcgtcgccgacgacgtcctccccgacggcacgttcgtgccggcggggtcgtcggtcacgtactccatctactccgcggggcgcatgaagacggtgtggggcgacgactgcctggagttccggccggagcggtggctgtcggccgacggcacgaagttcgagccgcacgactcgttcaggttcgtggcgttcaacgccgggccacgcatttgcctcgggaaggacctcgcgtacctgcagatgaggaacatcgccggcagcgtgctcctccgccaccgcctggccgtggcgccgggccaccgcgtcgagcagaagatgtcgctcacgctgttcatgaagcacgggctccggatggaggtgcgcccgcgcgacctcgccccgatcgtcgacgagctccgcggcgccggggagtacgccgccgcggcgcgcgccaccgcggcctgcgcttag</cdnaseq>

Protein Sequence

<aaseq>MEAGTWAVVVAAVAAYMAWFWRMSRGLSGPRVWPVVGSLPGLVR HAEDMHEWIAANLRRTRGTYQTCIFAVPGLARRGGLVTVTCDPRNLEHVLKSRFDNYP KGPFWHGVFGDLLGDGIFNSDGETWVAQRKTAALEFTTRTLRTAMSRWVSRSIHSRLL PILSDAAAAGGGGGGATVDLQDLLLRLTFDNICGLAFGKDPETLARGLPENDFASAFD RATEATLNRFIFPECVWRFKKWMGLGMETTLARSVQHVDRYLSAVIKARKLELAAGNG KGDASSATPHDDLLSRFMRKGTYSDESLQHVALNFILAGRDTSSVALSWFFWLVSTHP AVERKIVRELCTVLAASRGADDPALWLAAPLNFEELDQLVYLKAALSETLRLYPSVPE DSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRMKTVWGDDCLEFRPERWLSADGTKFE PHDSFRFVAFNAGPRICLGKDLAYLQMRNIAGSVLLRHRLAVAPGHRVEQKMSLTLFM KHGLRMEVRPRDLAPIVDELRGAGEYAAAARATAACA</aaseq>

Gene Sequence

<dnaseqindica>299..1936#gctggagtagagtggcatcctggcaactctgtatatatatatttttcccttctgtatattaattgccatccatcgcattgcttctcgggcaggttctactcctatatatcgtctcgcttctctctctcgatctcaggtcaggggcgctagctggccactggcgactcacacagtcacacacacacacactctctcgtccttgctgctagctatctatcgctgcttgccccggcccatgcatgtgagctcacttattatagatcgatcgccatagcctagcttggtggtggtggtggtgatggaggcggggacgtgggcggtggtcgtggcggccgtggccgcgtacatggcgtggttctggaggatgtcgcgcgggctgagcgggccgagggtgtggccggtggtggggagcctgccggggctggtgcggcacgcggaggacatgcacgagtggatcgccgccaacctccgccgcacgcggggcacctaccagacgtgcatcttcgccgtgcccgggctggcgcgccgcggcgggctggtcacggtgacgtgcgacccgaggaacctggagcacgtcctcaagtcccggttcgacaactaccccaagggccccttctggcacggcgtgttcggggacctcctcggcgacggcatcttcaactccgacggggagacgtgggtggcgcagcggaagacggcggcgctggagttcaccacgcgcacgctgcgcaccgccatgtcgcggtgggtgtcgcggtccatccacagccgcctgctgcccatcctgtccgacgccgccgcggccggtggcggtggcggcggcgccaccgtcgacctccaggacctcctcctccgcctcaccttcgacaacatctgcggcctcgcgttcggcaaggaccccgagacgctcgcccgcggcctgccggagaacgacttcgcctcggcgttcgaccgcgccaccgaggccactctcaaccgcttcatcttcccggagtgcgtgtggcggttcaagaagtggatggggctcggcatggagaccacgcttgcgcgcagcgtccagcacgtcgaccgctacctctcggcggtcatcaaggcgcgcaagctcgagctcgccgccggcaacggcaagggcgacgcgtcgtcggccacgccgcacgacgacctcctgtcgcgcttcatgcggaaggggacctactccgacgagtcgctgcagcacgtggcgctcaacttcatcctcgccggccgcgacacctcctcggtggcgctctcctggttcttctggctggtctccacccaccccgccgtcgagcgcaagatcgtccgcgagctctgcaccgtcctggccgcgtcgcgcggcgccgacgacccggcattgtggctcgccgcgccgctcaacttcgaggagctcgaccagctcgtctacctcaaagcggcgctctcggagaccctccgcctgtacccctccgtgccggaggactccaagcacgtcgtcgccgacgacgtcctccccgacggcacgttcgtgccggcggggtcgtcggtcacgtactccatctactccgcggggcgcatgaagacggtgtggggcgacgactgcctggagttccggccggagcggtggctgtcggccgacggcacgaagttcgagccgcacgactcgttcaggttcgtggcgttcaacgccgggccacgcatttgcctcgggaaggacctcgcgtacctgcagatgaggaacatcgccggcagcgtgctcctccgccaccgcctggccgtggcgccgggccaccgcgtcgagcagaagatgtcgctcacgctgttcatgaagcacgggctccggatggaggtgcgcccgcgcgacctcgccccgatcgtcgacgagctccgcggcgccggggagtacgccgccgcggcgcgcgccaccgcggcctgcgcttagaagatcccgggcgttggacgaagtcaattggaaatggcaaaaaaatatgtagatagatgagagtccaagatagtaattactaaagggtttgtatggttggtgaggtcatttaaatcacttgcttttacagttcattaccagtcgatagaggaaatgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0560100, RefSeq:Os04g0560100