Os04g0560300

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0560300| Description = Similar to FLOWERING LOCUS D (Fragment)| Version = NM_001060080.1 GI:115459889 GeneID:4336650| Length = 2980 bp| De...")
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Gene Name

Os04g0560300

Description

Similar to FLOWERING LOCUS D (Fragment)

Version

NM_001060080.1 GI:115459889 GeneID:4336650

Length

2980 bp

Definition

Oryza sativa Japonica Group Os04g0560300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28465900..28468879

Sequence Coding Region

28466056..28466843,28467170..28468817

Expression

GEO Profiles:Os04g0560300

Genome Context

<gbrowseImage1> name=NC_008397:28465900..28468879 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28465900..28468879 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgaccaaccacctccctacacccccctccccctcctctcctcctttcccccgaacccctaccccgaccaaacccccgatcccgcgtccacccccacccttgtcctccccaaccccgccttccccaacaagcgcaagcgcaccggcttccgccgcaagctcccctccggctcccccgccgcgcccgtcgccgtcgctgcgtctccttccgcccagccgccgccccgcgcctccgccgccgacgacatcatcgtgatcaaccgggagccgacagcggaggcggtcaccgcactcaccgcgggcttcccggcggactccctcaccgacgaggagatcgaggcgggcgtggtctccgacgtgggcggcatcgagcaggtgaactacatcctcatccgcaaccacctcctcaccaggtggcgcgagaccttcaactcgtggctcgccaaggagtccttcgcgacgctcatcccgccacactgcgaccacctcctcaacgccgcctactccttcctcgtctcccatggccacatcaacttcggcgtggcgcccgccatcaaggagcgcatccccaaggagcccacgaggcacaacaccgtcatcgttgtcggcgccggccttgctgggctcgccgcggcacggcagctggtggcgttcggatttaaagtggtggtgttggagggccgcaagcggtgcggtggccgtgtgtacaccaagaagatggaaggaggtggacgctcagctgctggtgaccttggcggcagtgtgcttaccggcacattcgggaacccgctgggcattgtggcgaaacagctcggcttgccgatgcacaagatcagggacaagtgcccactttacaggcctgatgggtcaccagttgatccagaggtagataagaaagtggagggtacatttaacaagcttcttgataagtctagtcttctacgggcatcaatgggggatgtggcgatggatgtctcgcttggcgctgcacttgagacgttacggcagacggatggcgatctctctactgaccaggagatgaacttgttcaattggcacttagcaaatctggagtatgctaatgcagggttgctgtcaaagctgagccttgcattctgggaccaggacgatccgtatgacatggtcggggatcactgtttcttgcctggcggcaatggtaggcttgtgcagtccctggcagagaatgtgccgattgtttacgagaggacagtgcacactatacgttatggaggggatggggttcaggtggttgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggttctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtattaaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctggagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagttctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgctggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttctcaagatactgagaggtatctatgaacctcaaggtattgaggtcccagatcctctgcagagtgtttgtactagatggggcacagactccttcagtctaggttcgtattctcatgttgctgttggagcatctggagatgactatgacatactagctgaaagtgttggagatgggcggttgtttttcgctggagaggccaccacgagacgttatccagcaacaatgcatggtgctttcatcagtggtctgcgggaggctgcaaatatcactctccatgccaatgcccgagcagcaaagagcaaagttgaaaaaggtccatcaacaaatacacaggcctgtgctgctctactcatggacttgtttaggcaaccagatttggaatttggcagcttctctgtcatttttggtggacaagcttctgatccaaagtccccagccattctgaaggtggaactaggtggccctagaaagaaaggtgcaactgaagggggaaaggcggaccagcaccactcaaataaattgttgtttcagcaactccaatcacatttcaaccagcaacaacaactttatgtctacacattactatcacgacagcaggctatggagctaagagaggttagaggaggtgatgaaatgaggctgcattacctctgtgaaaagcttggtgtgaaattagttggcaggaaaggtcttggtccgggggctgatgctgtgattgcatccattaaggcagagcggaacagcagtagaactaaaactaggccctcaaaattaaaaattggaatccctaaatctaaatcttga</cdnaseq>

Protein Sequence

<aaseq>MSDQPPPYTPLPLLSSFPPNPYPDQTPDPASTPTLVLPNPAFPN KRKRTGFRRKLPSGSPAAPVAVAASPSAQPPPRASAADDIIVINREPTAEAVTALTAG FPADSLTDEEIEAGVVSDVGGIEQVNYILIRNHLLTRWRETFNSWLAKESFATLIPPH CDHLLNAAYSFLVSHGHINFGVAPAIKERIPKEPTRHNTVIVVGAGLAGLAAARQLVA FGFKVVVLEGRKRCGGRVYTKKMEGGGRSAAGDLGGSVLTGTFGNPLGIVAKQLGLPM HKIRDKCPLYRPDGSPVDPEVDKKVEGTFNKLLDKSSLLRASMGDVAMDVSLGAALET LRQTDGDLSTDQEMNLFNWHLANLEYANAGLLSKLSLAFWDQDDPYDMVGDHCFLPGG NGRLVQSLAENVPIVYERTVHTIRYGGDGVQVVVNGGQVYEGDMALCTVPLGVLKNGG VKFVPELPQRKLDSIKRLGFGLLNKVAMLFPHVFWSTDLDTFGHLTEDPSHRGEFFLF YSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLKILRGIYEPQGIEVPDPLQSV CTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFI SGLREAANITLHANARAAKSKVEKGPSTNTQACAALLMDLFRQPDLEFGSFSVIFGGQ ASDPKSPAILKVELGGPRKKGATEGGKADQHHSNKLLFQQLQSHFNQQQQLYVYTLLS RQQAMELREVRGGDEMRLHYLCEKLGVKLVGRKGLGPGADAVIASIKAERNSSRTKTR PSKLKIGIPKSKS</aaseq>

Gene Sequence

<dnaseqindica>2037..2824#63..1710#atctaaacccccaccagatttatcgagcaggcgcgccggctttgtctccgccgccggcgaccatgtctgaccaaccacctccctacacccccctccccctcctctcctcctttcccccgaacccctaccccgaccaaacccccgatcccgcgtccacccccacccttgtcctccccaaccccgccttccccaacaagcgcaagcgcaccggcttccgccgcaagctcccctccggctcccccgccgcgcccgtcgccgtcgctgcgtctccttccgcccagccgccgccccgcgcctccgccgccgacgacatcatcgtgatcaaccgggagccgacagcggaggcggtcaccgcactcaccgcgggcttcccggcggactccctcaccgacgaggagatcgaggcgggcgtggtctccgacgtgggcggcatcgagcaggtgaactacatcctcatccgcaaccacctcctcaccaggtggcgcgagaccttcaactcgtggctcgccaaggagtccttcgcgacgctcatcccgccacactgcgaccacctcctcaacgccgcctactccttcctcgtctcccatggccacatcaacttcggcgtggcgcccgccatcaaggagcgcatccccaaggagcccacgaggcacaacaccgtcatcgttgtcggcgccggccttgctgggctcgccgcggcacggcagctggtggcgttcggatttaaagtggtggtgttggagggccgcaagcggtgcggtggccgtgtgtacaccaagaagatggaaggaggtggacgctcagctgctggtgaccttggcggcagtgtgcttaccggcacattcgggaacccgctgggcattgtggcgaaacagctcggcttgccgatgcacaagatcagggacaagtgcccactttacaggcctgatgggtcaccagttgatccagaggtagataagaaagtggagggtacatttaacaagcttcttgataagtctagtcttctacgggcatcaatgggggatgtggcgatggatgtctcgcttggcgctgcacttgagacgttacggcagacggatggcgatctctctactgaccaggagatgaacttgttcaattggcacttagcaaatctggagtatgctaatgcagggttgctgtcaaagctgagccttgcattctgggaccaggacgatccgtatgacatggtcggggatcactgtttcttgcctggcggcaatggtaggcttgtgcagtccctggcagagaatgtgccgattgtttacgagaggacagtgcacactatacgttatggaggggatggggttcaggtggttgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggttctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtattaaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctggagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagttctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgctggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttctcaagatactgagaggtaagacctttatctcctatcatcagtttttttttaatacgctaccatcagaattttttactaccttatgtaaatggtcatctagcgatgtaaaatctatcatcgtattttagatcactatatgactatatgcataaggtggtacttcaatatgcctcacccaagtgactctttgcaagttgcaacagactctttgttccattaacctcatacctctgcaactgcactgaaatatatgtagacatgtatgtagtatgttgttacaataggttcgactgcttaaaaccttggttttttgtctaaaaggtgaatgttgtgtatctcaggtatctatgaacctcaaggtattgaggtcccagatcctctgcagagtgtttgtactagatggggcacagactccttcagtctaggttcgtattctcatgttgctgttggagcatctggagatgactatgacatactagctgaaagtgttggagatgggcggttgtttttcgctggagaggccaccacgagacgttatccagcaacaatgcatggtgctttcatcagtggtctgcgggaggctgcaaatatcactctccatgccaatgcccgagcagcaaagagcaaagttgaaaaaggtccatcaacaaatacacaggcctgtgctgctctactcatggacttgtttaggcaaccagatttggaatttggcagcttctctgtcatttttggtggacaagcttctgatccaaagtccccagccattctgaaggtggaactaggtggccctagaaagaaaggtgcaactgaagggggaaaggcggaccagcaccactcaaataaattgttgtttcagcaactccaatcacatttcaaccagcaacaacaactttatgtctacacattactatcacgacagcaggctatggagctaagagaggttagaggaggtgatgaaatgaggctgcattacctctgtgaaaagcttggtgtgaaattagttggcaggaaaggtcttggtccgggggctgatgctgtgattgcatccattaaggcagagcggaacagcagtagaactaaaactaggccctcaaaattaaaaattggaatccctaaatctaaatcttgagttcctgaattagctgcattatgatctagagttactgatactttgatttagaagcttgaccgcatgatttttctttatcctgtcaatcgtgtttctacctggtaatcatgctgtttgttcgcatgaagcttctactgagcgctggctttgtcccag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0560300, RefSeq:Os04g0560300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0560300&oldid=16812"