Os04g0561500

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0561500| Description = Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE)| Version = NM_001060087.1 GI:11545...")
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Gene Name

Os04g0561500

Description

Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE)

Version

NM_001060087.1 GI:115459903 GeneID:4336657

Length

4756 bp

Definition

Oryza sativa Japonica Group Os04g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28507356..28512111

Sequence Coding Region

28507397..28507515,28508343..28508565,28508674..28508880,28508967..28509037,28509126..28509291
,28509417..28510016,28510156..28510536,28510625..28510700,28510794..28510857
,28510956..28511088,28511170..28511283,28511367..28511432

Expression

GEO Profiles:Os04g0561500

Genome Context

<gbrowseImage1> name=NC_008397:28507356..28512111 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28507356..28512111 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctccctacccgccgccgacaagccgttgccggcgctccggtaccctccggctcgccgcgacgacgacattgtcgacgactaccatggagttaccgtgccggacccctacagatggatggaggagctggagtcggaggaggtgaaggggttcgtggacgcgcaggcggccgtggccgaggcggtgctctccacctgcgacgaccaccgcgtccgcctgcgcgggcagctcaccgcgctcttcgaccacccgcgctaccgcgccccgttcaagcgcgccggcagctacttctacctccacaaccccggcctccagcctcacagcgccctctacgtccagcacgggctggggggcggggaggaacctgacgtgttgctggacccaaacacgttcagcgacgacgccaccgtgtcgctcgccatgttcggcgtcagccacgacggcgagcacctggcgtacggcaccagcgcgagcggcagcgactgggtcaccatccgggtgatgcgcgtgcgcgacaggcggcacctgcacgacgagatatgctgggtgaaattctcggccatcgcgtggactcgcgacgggaaggggttcttctactctcgttttccagctccaaagaatgatggggcgccattgggtgctgggatcaagactagtgttaatctcaatcatgaagtctattaccattttcttggaaccgatcagtcagaggacctgttgtgctgggaggaccctgaccatcccaagtacatttacacccctgaagtttcagaagatggcaagtatgtgattctgtcagtcgcagaaacttcagaaccggtaaacaagttgtactactgtgacctctcggctctccctgacggcctggaaggcatgaagggaaaccatggcaatgccatgcttccttttgttaagcttgtggatgaatttgaagcatactacgcactcatcgccaatgacgacactcaattcacatttctcactaacaagaatgctccaaagtacaagctgtcgaggattgatgtcaacgagccacactcatggatggatattctccctgaagacgagaaggctgtcctagagtcggcttgtgcagtccatggtgataagcttctggtaaactacctgtcggatgtcaagtatgtcttgcagatgaggagcttggttaccggggagttgctccatgacatacccattgacattggcagcgtcaatgggatctctggcagacgtgacaattcagaggtgttcatcgagtttgctagcttccttactcccggaatcatctataggtgtgatgtcagcaaggagactcccgagatgaacatatacagagaaatctcggttggtggttttgatcgcacagattttgaagcaaagcaggtgttctaccctagcaaggatggaaccaagatcccaatgttcatcgtgtcgaagaaaagcatcgttcttgatggatctcacccgactctgctgtacggctacggtggcttcggcatgaacatgacgccccatttcagcgtcacccgcatcgtcctcatgcggaatctcgggttcgtgtcgtgcatcgccaacatccgaggcggcggggagtacggcgaggactggcacaaggccgggtcgctcgcgaacaagcagaactgcttcgacgatttcatcgcggctggtgagttcctcgtctctgcaggctacacgaacccgagcaggctgtgcgtcgagggtgcgagcaacgggggccttcttgtagctgcctgcatcaaccagcgtccggacctttttggttgtgctctggctcacgtgggtgtcatggacatgcttcgattccacaagttcaccataggccgtgcatggacctgtgatttcggctgctcggagaaggaagaggaattccactggctcatcaagtactctcccctccacaacgtcaggcggccatgggagaaaggtcaccggaggcagcagtacccttccaccatgctgctgacggcggaccacgacgaccgcgtcgtgccgtcgcacacgctcaaattcctcgcgacgatgcagcacgtactgtgcacgagcgtgaaggagagcccgcagacgaacccgatcgtcgcgcggatcgaccgcaagagcgggcacggatgcggccgctccacgcagaaaatcatcgacgaagctgcggacaggtatgcgttcgcggcaaagacgatggggatctcttggatcgactga</cdnaseq>

Protein Sequence

<aaseq>MGSLPAADKPLPALRYPPARRDDDIVDDYHGVTVPDPYRWMEEL ESEEVKGFVDAQAAVAEAVLSTCDDHRVRLRGQLTALFDHPRYRAPFKRAGSYFYLHN PGLQPHSALYVQHGLGGGEEPDVLLDPNTFSDDATVSLAMFGVSHDGEHLAYGTSASG SDWVTIRVMRVRDRRHLHDEICWVKFSAIAWTRDGKGFFYSRFPAPKNDGAPLGAGIK TSVNLNHEVYYHFLGTDQSEDLLCWEDPDHPKYIYTPEVSEDGKYVILSVAETSEPVN KLYYCDLSALPDGLEGMKGNHGNAMLPFVKLVDEFEAYYALIANDDTQFTFLTNKNAP KYKLSRIDVNEPHSWMDILPEDEKAVLESACAVHGDKLLVNYLSDVKYVLQMRSLVTG ELLHDIPIDIGSVNGISGRRDNSEVFIEFASFLTPGIIYRCDVSKETPEMNIYREISV GGFDRTDFEAKQVFYPSKDGTKIPMFIVSKKSIVLDGSHPTLLYGYGGFGMNMTPHFS VTRIVLMRNLGFVSCIANIRGGGEYGEDWHKAGSLANKQNCFDDFIAAGEFLVSAGYT NPSRLCVEGASNGGLLVAACINQRPDLFGCALAHVGVMDMLRFHKFTIGRAWTCDFGC SEKEEEFHWLIKYSPLHNVRRPWEKGHRRQQYPSTMLLTADHDDRVVPSHTLKFLATM QHVLCTSVKESPQTNPIVARIDRKSGHGCGRSTQKIIDEAADRYAFAAKTMGISWID</aaseq>

Gene Sequence

<dnaseqindica>42..160#988..1210#1319..1525#1612..1682#1771..1936#2062..2661#2801..3181#3270..3345#3439..3502#3601..3733#3815..3928#4012..4077#gtatacacatattcattgcctcattggtactttggttagctatgggctccctacccgccgccgacaagccgttgccggcgctccggtaccctccggctcgccgcgacgacgacattgtcgacgactaccatggagttaccgtgccggacccctacagatggtgagtgtcttgtcgacggctgtttccgttcctctgtaatcgattctgtcctgttttgagaggcactctgtttgttacgttatgttatgcacatctgctttttctgaattttaccctttttacccggcttgaaccatttctctgttcgtgcaacatgaaaaaacatagttcctaaattcatggaaagaagtactgcttcaggataagagtgttagaattcctgaggttcagtttttttttaatctcatttcttaataaacttcggccggcttagggcctggcgaaacagttttttttatataaaaatattcattagattattgacatgtattatctactttattgtaggataaattaaatattttttataaacaagttgtctaaataatacttcctccgtttcactatgtaaatcttttttttttgcggggcactatatatgtctaaatttattaacgttaatacgaatgtgaaaaatgttagaatgatttacattattaaacggagggagtacagtagaagagattttcttttgaaaagaatgtaagtattttagcatatggtgtgcagtaagaatgtaagacgcattcccttgtataccgcagtcaaaacacttggtaaatcccagaatgattgcgtttggaataccactatatagtgcagacgaaatgcaaatcgaagcagagttgaacacttgaacacgattcttcccgtacgttctcagtccatccgatcgaaacaaagcatgagtaattttgttcttattattgttggaccgtgcgtggttgatgatcgctgatgtattgtaaaattgaccgcgagtgaaggatggaggagctggagtcggaggaggtgaaggggttcgtggacgcgcaggcggccgtggccgaggcggtgctctccacctgcgacgaccaccgcgtccgcctgcgcgggcagctcaccgcgctcttcgaccacccgcgctaccgcgccccgttcaagcgcgccggcagctacttctacctccacaaccccggcctccagcctcacagcgccctctacgtccaggtcaatcaaagccccccacgcgaatctcgaggccacccagcagagtccgagagagacgctagctttctgcaatctgaaccgtcgcttttgttgttgttgttgttgcagcacgggctggggggcggggaggaacctgacgtgttgctggacccaaacacgttcagcgacgacgccaccgtgtcgctcgccatgttcggcgtcagccacgacggcgagcacctggcgtacggcaccagcgcgagcggcagcgactgggtcaccatccgggtgatgcgcgtgcgcgacaggcggcacctgcacgacgagatatgctgggtgagctaccctctgcccccgtgcgtggcgcacggtcgatcgtttcagagatccctaatatgattgtgaattcgagaaatttgcaggtgaaattctcggccatcgcgtggactcgcgacgggaaggggttcttctactctcgttttccagctccaaagtaagtgccaacatatagtagtggatttgttgaaatatgctactcctacagtcctacttgacatagcgtcgtttgtttggacgagcaggaatgatggggcgccattgggtgctgggatcaagactagtgttaatctcaatcatgaagtctattaccattttcttggaaccgatcagtcagaggacctgttgtgctgggaggaccctgaccatcccaagtacatttacacccctgaagtttcagaagatggcaaggtatgcagctatggccatgagtcgatcaacttaggacgaagttttgtacaactctgaatcttttctaagcattgacaaacatgagctactcctgagctgatatctcatcacttcacttgttgcagtatgtgattctgtcagtcgcagaaacttcagaaccggtaaacaagttgtactactgtgacctctcggctctccctgacggcctggaaggcatgaagggaaaccatggcaatgccatgcttccttttgttaagcttgtggatgaatttgaagcatactacgcactcatcgccaatgacgacactcaattcacatttctcactaacaagaatgctccaaagtacaagctgtcgaggattgatgtcaacgagccacactcatggatggatattctccctgaagacgagaaggctgtcctagagtcggcttgtgcagtccatggtgataagcttctggtaaactacctgtcggatgtcaagtatgtcttgcagatgaggagcttggttaccggggagttgctccatgacatacccattgacattggcagcgtcaatgggatctctggcagacgtgacaattcagaggtgttcatcgagtttgctagcttccttactcccggaatcatctataggtgtgatgtcagcaaggagactcccgagatgaacatatacagagaaatctcggttggtggttttgatcgcacagattttgaagcaaagcaggtaattttcaatagcattacgagctcttagcacgatacctgaactttgtagaagtacaatgcattttcagagttgcacaattcctgtttgtaattcagctagcatttctccctatttttttcctctccatttttttcaggtgttctaccctagcaaggatggaaccaagatcccaatgttcatcgtgtcgaagaaaagcatcgttcttgatggatctcacccgactctgctgtacggctacggtggcttcggcatgaacatgacgccccatttcagcgtcacccgcatcgtcctcatgcggaatctcgggttcgtgtcgtgcatcgccaacatccgaggcggcggggagtacggcgaggactggcacaaggccgggtcgctcgcgaacaagcagaactgcttcgacgatttcatcgcggctggtgagttcctcgtctctgcaggctacacgaacccgagcaggctgtgcgtcgagggtgcgagcaacgggggccttcttgtagctgcctgcatcaaccaggttttctcactgtaacctcttcagttttttcagttctctgcagaagattgagcaagaactcactgtggattgtgcattttttttacagcgtccggacctttttggttgtgctctggctcacgtgggtgtcatggacatgcttcgattccacaagttcaccataggttctgactcatccctgaaacccatatacttgaactttctttttcgttgaaatatttcatctcaccaatgtgctcggcaacacttgcatgcaggccgtgcatggacctgtgatttcggctgctcggagaaggaagaggaattccactggctcatcaagtatggcactagccctctctctgaccaccaaggaattcttaatccttttttccttcagtcacatcataacttagcaatgccaaactactgacgcgcaggtactctcccctccacaacgtcaggcggccatgggagaaaggtcaccggaggcagcagtacccttccaccatgctgctgacggcggaccacgacgaccgcgtcgtgccgtcgcacacgctcaaattcctcgcggtgcgacccgtgatctctcctcctaccttcgccgccattttctctggattctgatgaattttctctgttgattgggggcagacgatgcagcacgtactgtgcacgagcgtgaaggagagcccgcagacgaacccgatcgtcgcgcggatcgaccgcaagagcgggcacggatgcggccgctccacgcagaaaatcgtaggcgaaatctttgctcgtctgtgtgtgtcacgtttttttctgctgatttaactgaattttgctccgtccgtgggtggcagatcgacgaagctgcggacaggtatgcgttcgcggcaaagacgatggggatctcttggatcgactgaacaagcctccgagcagttggtgccttggtgggtgctaatgggtttaacttcttatagcatataaccctataaaatttgagagttggatctagaatgagatgaacacaacttctgtatatttttggcttaaaaatatttatgggctagatatggttgtgaaaaaaatccatgggtctcaccaatatttagagattggttagttggctatggtcattagataggtgtctaaaaaaaccgtgatgtgagaaggataaaatttattccctcttacactcgccataagaaggtgagactcaaacctgggtgaatgtattcacaaatatgtgcgctcaccacggtttttttttttagaattacacagtacaacacaggtagtcataacgcacgcacgcaaactttacccctacgagcatcttcgaagattgggccgacaaatccatcttggagattgacgaagtcaccacagaatttgtaatgtaattggttgggtttttatagtgattggcatggtaactttgcatcttctatcttcttatgtagttcgttgaaaaaaaatagtgattggcatggttgatactcgatatgtacatatattacggatttcatcacctattcctagatggaaaacagttgtgaaactatgaatgtataaaaggagcttgatcatgattttctaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0561500, RefSeq:Os04g0561500