Os04g0562100

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0562100| Description = Amino acid/polyamine transporter II family protein| Version = NM_001060092.1 GI:115459913 GeneID:4336662| Length = 2...")
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Gene Name

Os04g0562100

Description

Amino acid/polyamine transporter II family protein

Version

NM_001060092.1 GI:115459913 GeneID:4336662

Length

2165 bp

Definition

Oryza sativa Japonica Group Os04g0562100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28536242..28538406

Sequence Coding Region

28536382..28536876,28536974..28537105,28537205..28537632,28537726..28537862,28537974..28538320

Expression

GEO Profiles:Os04g0562100

Genome Context

<gbrowseImage1> name=NC_008397:28536242..28538406 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28536242..28538406 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgagcgaggtgacgtcggttccgccgacgccgacgccgccgccggtgtcgaccccgccgtcgcagatacagtcaccggcggcgccggcgagcagccgggcgtcgccgctgcgggggatggggacgccgaacatcgccagccccgtgaggaaggcggtggcgagcgtgagtggctacctgggtgaggtcggccaaatgacgcggctcgccgacccgcgcgacgcctggctgcccatcaccgagtcccgcagcggcaacgcctactacgccgcgttccacagcctcagctccggcatcggcttccaggcgctcgtgctccccgtcgccttctcccttctcggatggacatgggcgatcatctgcctgaccgtggcgttcgcgtggcagctctacacgctgtggctgctcgtcaagctccacgagcccgtcgctggtggcacccggtacagccgatacatgtacctcgccaccaccgtcttcggcgagaaatgggggaagatactggcgttgctcccggtcatgtacctgtcggcgggcacctgcacggcgctcatcatcgtcggcggcggcagcatgaagctgctgttcaacatcgcgtgcggggaggtgtgcctggcccggccgctgacgaccgtggagtggtacctcgtgttcgtctgcgtcgccgcgctgctgtcccagctcccgaacctcaactccatcgccggcgtgtcgctcgtcggcgccaccgcggccgtcgcgtactgcaccatgatctgggtcgtgtccgtggccaaggggagggtggccggcgtgtcctacgacccggtcaggaccaccgacgaggaggacggcgcgattggtatcctgaatggcctcggcatcattgcgttcgcgtttagggggcacaatcttgtgctcgagattcaggccacaatgccatcaactctgaaacatccttctcacgtgccgatgtggaagggcgtcaaagctgcctacgtcatcatcgcactctgcttgtaccctgtggccgttggtggcttctgggcttacggcgaccagataccaccaaatgggatcctgagcgcgctgtacaagttccacagccaggacgtgtccagggtggtgctggggactgcgacgctgctggtgatcgtcaactgcctgaccacgtatcagatctacgcgatgccggtgttcgacaacatggagaccgggtacgtccacaagaagaaccggccgtgcccgtggtggatgcgcgccggcttccgcgccctcttcggcgccatcaacctcctcatcgccgtcgcgctgccgttcctgtcggaactcgccggcctcctcggggggatctcgctgccggtcacgctggcgtacccgtgcttcatgtgggtggcgatcatgaggccggccaagggcaccgccatgtggtacaccaactgggggctgggaagccttggcatgggtctgagcttcgtgctcatagttgggaatctctggggccttgtggagaaaggcctgcatgtgaagttcttcaagcctgcggatttccagtga</cdnaseq>

Protein Sequence

<aaseq>MSSEVTSVPPTPTPPPVSTPPSQIQSPAAPASSRASPLRGMGTP NIASPVRKAVASVSGYLGEVGQMTRLADPRDAWLPITESRSGNAYYAAFHSLSSGIGF QALVLPVAFSLLGWTWAIICLTVAFAWQLYTLWLLVKLHEPVAGGTRYSRYMYLATTV FGEKWGKILALLPVMYLSAGTCTALIIVGGGSMKLLFNIACGEVCLARPLTTVEWYLV FVCVAALLSQLPNLNSIAGVSLVGATAAVAYCTMIWVVSVAKGRVAGVSYDPVRTTDE EDGAIGILNGLGIIAFAFRGHNLVLEIQATMPSTLKHPSHVPMWKGVKAAYVIIALCL YPVAVGGFWAYGDQIPPNGILSALYKFHSQDVSRVVLGTATLLVIVNCLTTYQIYAMP VFDNMETGYVHKKNRPCPWWMRAGFRALFGAINLLIAVALPFLSELAGLLGGISLPVT LAYPCFMWVAIMRPAKGTAMWYTNWGLGSLGMGLSFVLIVGNLWGLVEKGLHVKFFKP ADFQ</aaseq>

Gene Sequence

<dnaseqindica>1531..2025#1302..1433#775..1202#545..681#87..433#aagcattccgcccagcaaacgcaccaaaccgcccgtggtgttttacgtcgtagcgccgcgggcagcagcagcggcgtgcctgtgccatgtcgagcgaggtgacgtcggttccgccgacgccgacgccgccgccggtgtcgaccccgccgtcgcagatacagtcaccggcggcgccggcgagcagccgggcgtcgccgctgcgggggatggggacgccgaacatcgccagccccgtgaggaaggcggtggcgagcgtgagtggctacctgggtgaggtcggccaaatgacgcggctcgccgacccgcgcgacgcctggctgcccatcaccgagtcccgcagcggcaacgcctactacgccgcgttccacagcctcagctccggcatcggcttccaggcgctcgtgctccccgtcgccttctcccttctcggatggtacgcgctcgacgtgttacgtactactcctagtgatctagtagtagcagcgagtacgtggaaactttggaacatgcacatgtgacatggtgcgctgtgtgtgtgttgcaggacatgggcgatcatctgcctgaccgtggcgttcgcgtggcagctctacacgctgtggctgctcgtcaagctccacgagcccgtcgctggtggcacccggtacagccgatacatgtacctcgccaccaccgtcttcggtgcgttttttttcctcttgagttcacggcgacttactgtgactctttctgcggcgactctgttttctcatgcatgccttcgcctttgatcaggcgagaaatgggggaagatactggcgttgctcccggtcatgtacctgtcggcgggcacctgcacggcgctcatcatcgtcggcggcggcagcatgaagctgctgttcaacatcgcgtgcggggaggtgtgcctggcccggccgctgacgaccgtggagtggtacctcgtgttcgtctgcgtcgccgcgctgctgtcccagctcccgaacctcaactccatcgccggcgtgtcgctcgtcggcgccaccgcggccgtcgcgtactgcaccatgatctgggtcgtgtccgtggccaaggggagggtggccggcgtgtcctacgacccggtcaggaccaccgacgaggaggacggcgcgattggtatcctgaatggcctcggcatcattgcgttcgcgtttagggggcacaatcttgtgctcgagattcaggtcaagtctctctctcactctttccgtctccactcagccactgacaacgatggaaaagataaggtcactgatgagtgtatgtttgccatcaactcgcaggccacaatgccatcaactctgaaacatccttctcacgtgccgatgtggaagggcgtcaaagctgcctacgtcatcatcgcactctgcttgtaccctgtggccgttggtggcttctgggcttacggcgaccaggtgagaatgcctcatctggcctgaacgatgaacaaaaaaacttgaaatgttctcttgtgaaattcatcgaccccgtgtgtccgttcgttcgatgcagataccaccaaatgggatcctgagcgcgctgtacaagttccacagccaggacgtgtccagggtggtgctggggactgcgacgctgctggtgatcgtcaactgcctgaccacgtatcagatctacgcgatgccggtgttcgacaacatggagaccgggtacgtccacaagaagaaccggccgtgcccgtggtggatgcgcgccggcttccgcgccctcttcggcgccatcaacctcctcatcgccgtcgcgctgccgttcctgtcggaactcgccggcctcctcggggggatctcgctgccggtcacgctggcgtacccgtgcttcatgtgggtggcgatcatgaggccggccaagggcaccgccatgtggtacaccaactgggggctgggaagccttggcatgggtctgagcttcgtgctcatagttgggaatctctggggccttgtggagaaaggcctgcatgtgaagttcttcaagcctgcggatttccagtgagaaaactgcaaatgcagcaaaacctgtgaaaccgacggaaaacgcaatgtagtgtggtgattttgtcttttctcagcacaactgtaataggttgattttgtttagaagctatgctctaataacacttcaacattactacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0562100, RefSeq:Os04g0562100