Os04g0563900

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0563900| Description = Protein kinase-like domain containing protein| Version = NM_001187115.1 GI:297723360 GeneID:9268653| Length = 4533 b...")
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Gene Name

Os04g0563900

Description

Protein kinase-like domain containing protein

Version

NM_001187115.1 GI:297723360 GeneID:9268653

Length

4533 bp

Definition

Oryza sativa Japonica Group Os04g0563900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28659719..28664251

Sequence Coding Region

28659719..28660010,28661495..28661906,28662003..28662126,28662276..28662418,28662924..28663059
,28663640..28664115,28664167..28664251

Expression

GEO Profiles:Os04g0563900

Genome Context

<gbrowseImage1> name=NC_008397:28659719..28664251 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28659719..28664251 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaactgcttcggctccgaggaggccgaagctgctgcgaccgtgagggcaccagctcaaggccaccatggacgccggcaagattctgatcaaatttcgaacctcgcagcagaagcagcagctccagcaaataggcgtagtcccatcatggcaccgcccaaagcgcttgcctccatgagcagcgccgccgggcatcactccgggatgaggtcgagctcgtccatgagcagcatcaccaccagaagcagcagcagcagcagcaacctgcccctgggagcagccggcggcgcggacgtcggcgtcgccggggcgctctacccggagccggaggggaggatcctggaggtccccaacctccgaatcttcacgttcgcggagctcagggcggcgacgaggaacttcaagccggacagcgtcctcggcgagggcgggttcgggcgggtgtacaaggggtgggtcgacgagaggacgatgagccccgcgcgcagcggcaccggcatggtcatcgccgtcaagaagctcaaccccgagagcgtgcagggcctgcaagaatggcagtctgagataaacttcctggggaggctgtcgcatcccaacttggtgaggctgatcgggtactgcgtggaggacagggagctgctgctcgtgtacgagttcatggccaagggcagcttggagaatcacctcttcaggaaaggcagcgcctaccagccgatctcgtggaacctctgtctccgcatcgccatcggcgccgcccgcggcctcgcgttcctgcactcgtcggagaggcagatcatctaccgcgacttcaaggcctccaacatcctcctcgacacgcactacaacgccaagctctccgacttcgggctcgccaagaacggccccaccgccggcgagagccacgtcaccacccgcgtcatgggcacctacggctacgccgcgccggagtacgtcgccacagggcacctgtacgtgaagagcgacgtgtacgggttcggcgtggtgctgctggagatgctgacggggatgcgggcgctggacacggggaggccggcgccgcagcacagcctcgtggagtgggccaagccgtacctggcggaccggcggaagctggcgcggctggtggacccgcgcctggaggggcagtacccgtccagggcggcgcagcaggcggcccagctcacgctgcgctgcctctccggggaccccaggagccggccctccatggccgaggtcgtccaggccctcgtggagatcgagcggatcaggtcgcgtcccaaggccgcgtcgtcgcgggaggacgcgtcgcctcgggtcccgacgcggagtggtgggcacgggcaccaccatcaccaccactcgtcgcggccgaggttctttctttggtttgctttccagcagtgctgttggacagctaatatccttcagaagcatggtatcgatagtcacttggtctgccccttctgcgtccaggatcttgagacagcgaatcacatcctcctcgactgtgtgtttgctcgacaggtctggctccgcgtgctttcgcctcctgggtgggctgccctctctccccccgcggtagctggttccaggactggtggtcgtcctccagggcctgcttacctgagcatctccgcgacggtttcgactccctggtgctgctag</cdnaseq>

Protein Sequence

<aaseq>MGNCFGSEEAEAAATVRAPAQGHHGRRQDSDQISNLAAEAAAPA NRRSPIMAPPKALASMSSAAGHHSGMRSSSSMSSITTRSSSSSSNLPLGAAGGADVGV AGALYPEPEGRILEVPNLRIFTFAELRAATRNFKPDSVLGEGGFGRVYKGWVDERTMS PARSGTGMVIAVKKLNPESVQGLQEWQSEINFLGRLSHPNLVRLIGYCVEDRELLLVY EFMAKGSLENHLFRKGSAYQPISWNLCLRIAIGAARGLAFLHSSERQIIYRDFKASNI LLDTHYNAKLSDFGLAKNGPTAGESHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFG VVLLEMLTGMRALDTGRPAPQHSLVEWAKPYLADRRKLARLVDPRLEGQYPSRAAQQA AQLTLRCLSGDPRSRPSMAEVVQALVEIERIRSRPKAASSREDASPRVPTRSGGHGHH HHHHSSRPRFFLWFAFQQCCWTANILQKHGIDSHLVCPFCVQDLETANHILLDCVFAR QVWLRVLSPPGWAALSPPAVAGSRTGGRPPGPAYLSISATVSTPWCC</aaseq>

Gene Sequence

<dnaseqindica>4242..4533#2346..2757#2126..2249#1834..1976#1193..1328#137..612#1..85#atggggaactgcttcggctccgaggaggccgaagctgctgcgaccgtgagggcaccagctcaaggccaccatggacgccggcaaggtacgtattcaaatgcttgtggcatttctttttcccttggttcttaaacagattctgatcaaatttcgaacctcgcagcagaagcagcagctccagcaaataggcgtagtcccatcatggcaccgcccaaagcgcttgcctccatgagcagcgccgccgggcatcactccgggatgaggtcgagctcgtccatgagcagcatcaccaccagaagcagcagcagcagcagcaacctgcccctgggagcagccggcggcgcggacgtcggcgtcgccggggcgctctacccggagccggaggggaggatcctggaggtccccaacctccgaatcttcacgttcgcggagctcagggcggcgacgaggaacttcaagccggacagcgtcctcggcgagggcgggttcgggcgggtgtacaaggggtgggtcgacgagaggacgatgagccccgcgcgcagcggcaccggcatggtcatcgccgtcaagaagctcaaccccgagagcgtgcagggcctgcaagaatggcaggtaaattcgttcgttcacagctcgccatctgcagcgctgaccgatcgcggtgttaacgtcaacttgttttagacagcacgaaaacggataaacagtatcataatcacacgcatgattcaagctgatccggaaatgatccttaaagaaatcggtagaaaggcatcaatgattgtagccgcggtttaagctttgcactggattattccacctccaaaccataccgtgtgcttcttcttcttcttctttttttcctagagaaaccatgccgcgtgttcacgtggccggccaggcagtcatccgcagttctgaaatgttcatatactatgaagctacttgaccacttcctttctcgctgcgcatactataaactggagtagttgcacgcgccatgctgtgaactacgctgttctgtgtgtgtgcgcgcgcgcgcgcgtgtggcgattttactttttttttgtttctacgcgccgcctcaaagctgcgggacggcgcgtcgtgatcggcacgttggctgctgcatgtctgcgtttggggctcgtgcttgctgagctaattaacctggtgacgtttctctttgcagtctgagataaacttcctggggaggctgtcgcatcccaacttggtgaggctgatcgggtactgcgtggaggacagggagctgctgctcgtgtacgagttcatggccaagggcagcttggagaatcacctcttcaggagtgagtttaatttgcttctccttcttcttctgtcctgtcacggtagatggttctttgttcttgtctttccggtatgtttctttgccagctacgagcttaattgaacccgttgaccttaggtcagattttggttctcttggtcgacagcgatgctggattggtttatgattgatgtggtctcatatcgtcgcgaaaataggtttgccccctatacagccaacgaaaataggttctgagttgcgtagcacagtggctatgtgggtctgaccagaatattcagatttctgggtcaatttgtcaatagcgttctcactctccctgctcaacatggccgtgtcaatttctacgggccaaacaggctagcatgttgcagggctttattgggccgaaatttatcggtataaaaccgtaagattataaactagaagtgtataaaaccgtagttttccgtaagattattgtgacagcaaagtgaactaacaccgagcatattgcttgcaagcagaaggcagcgcctaccagccgatctcgtggaacctctgtctccgcatcgccatcggcgccgcccgcggcctcgcgttcctgcactcgtcggagaggcagatcatctaccgcgacttcaaggcctccaacatcctcctcgacacggtacgtagtactcctactacgtatgtacgcgcaaaaattaaaaccgccatggctgccacgcacgtggtacacgcgaagctgcacctgcacgtaggagtaatcattaacgccaagctcaactcgttctcctccctcctgtacatgggcagcactacaacgccaagctctccgacttcgggctcgccaagaacggccccaccgccggcgagagccacgtcaccacccgcgtcatgggcacctacggctacgccgcgccggagtacgtcgccacaggtaaatcacgcacgaacacgacagctaatgttgtgctaatttcacgtgacaaatgtaaccggagaggaatcgtgtatcaatcaatttattatgcagggcacctgtacgtgaagagcgacgtgtacgggttcggcgtggtgctgctggagatgctgacggggatgcgggcgctggacacggggaggccggcgccgcagcacagcctcgtggagtgggccaagccgtacctggcggaccggcggaagctggcgcggctggtggacccgcgcctggaggggcagtacccgtccagggcggcgcagcaggcggcccagctcacgctgcgctgcctctccggggaccccaggagccggccctccatggccgaggtcgtccaggccctcgtggagatcgagcggatcaggtcgcgtcccaaggccgcgtcgtcgcgggaggacgcgtcgcctcgggtcccgacgcggagtggtgggcacgggcaccaccatcaccaccactcgtcgcggccgaggtctggatcggacggcgcgcggagcggatacccttctcctcgagtgagatagccccgtcgaggccccaacatacgctgggtttggactttcggcccaaattatctccgtacgtttgcagattgcggttggcccaaaagttggtggcctaactgctagggggggtcagtaaggtgctttgtctaaaccttctgaaacaaagaagtggaatgtgatgtttccatgaatcgagaacttcttgtggatgagattgtgggggatgagtacagtatacgagatattaggactataggagtagtgacaaatttttagaaatgtcattgtcgacttttttgagcttaaagtagtcttgaatgtgaacagaagctgcttttagcactgagaaatgggcaacatatcctatgcacacaggccctcacgtgtacacacgtgcacaacaactaaaaaatgtcacctaaaaatctagaaaaaatcatacacatactttcaattgtattacacctaaggttaaaatctcaacgtcaaattcattatattttagccgtaactaaaaaaaaacaaaaaatctgacagttttaaggttgcaattttgtcagaattttatatttttttgttattctctatgtagaatgaatttaaagatgcgactttgcacgtagatgtaatactattgaaagtacatgtatgaattttcctagaattttttgtgataatttttagttggtgtacacggtgtgtacacgcgagggcctgtgtgcataggatacgctcccctgagaaaagaagtagcaattactaggccttttgagctggagatggattctaactttattgtatgtcaattaaataattatagaaagttttttaaaaaagtaataagatatattgatataatatatcactccagaaacacgcaatattagatacaattttttataaattgtaacaaaaatagcaaattacttacatattacattattactatgaatttatcttgttaaattgtcttaaaaaattattacttatttagttgacatgtaagaaatgagtggatatcatatctaggtgattaaaagtgtttcaccttatgagctttgtgagtctcaacatgcgtatagacatatctaggattcatagctacagttaggtttatatgtcccgagaaagcgagcatatagcaaaggtcggagcccatatgcctgtctatcgcgttcctcgtcctaccattcgtgttcttcggtgatattgtccagctctggacattcccgagttcacacttcacaccccccatctcccagtttctccttatttgggatacggtgcttcacgtgcagctctcgtcgggtgtcgaggatcgtctcgtttggcactggacgtctgaccagcgctactcagcacgttcggcataccaagcatttttctatggccagcattcttttgcatgtgctgatcttctctggcatgcaaagggtcctgctaaatgcaggttctttctttggtttgctttccagcagtgctgttggacagctaatatccttcagaagcatggtatcgatagtcacttggtctgccccttctgcgtccaggatcttgagacagcgaatcacatcctcctcgactgtgtgtttgctcgacaggtctggctccgcgtgctttcgcctcctgggtgggctgccctctctccccccgcggtagctggttccaggactggtggtcgtcctccagggcctgcttacctgagcatctccgcgacggtttcgactccctggtgctgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0563900, RefSeq:Os04g0563900