Os04g0564700

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Revision as of 11:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0564700| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001187118.1 GI:297723366 GeneID:9271...")
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Gene Name

Os04g0564700

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001187118.1 GI:297723366 GeneID:9271804

Length

8845 bp

Definition

Oryza sativa Japonica Group Os04g0564700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28695006..28703850

Sequence Coding Region

28697527..28697658,28698104..28698216,28698513..28698570,28698656..28698748,28698886..28699076
,28699186..28699510,28700217..28700598,28700750..28700822,28700919..28701022
,28701099..28701190,28701280..28701333,28701452..28701536,28701612..28701745
,28703491..28703529

Expression

GEO Profiles:Os04g0564700

Genome Context

<gbrowseImage1> name=NC_008397:28695006..28703850 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28695006..28703850 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcgtcaggaagcttgtggagaaggcctccaagaagcatcgcatcggaggtatcagcggcctccgcgccgaggacgtgagcccgcggctggcgttccactacggcgtccccgccgacgccgcgctcctcgcctacgaccccgccctccacgtcctcgccgtcgccatcaggaatgggcagatcaagctgttcggccgcgacaacacgcaggcgctgctccaatccccgtcccccgtcccctccaagttcctgcggtttgccgaggggcaaagggttctcctgaacgtgaacgccaagaaccagatcgagatttgggacatcgacacaaagaagttgtgttatgtgcatccgttcgagaaggaaatcacggcattttccgttctgcagaatagcttctacatctatgtgggtgatagttttgggaatgtgtccctgttgaagcttgacttgggtcagacatgtctagttgacatgccatattggattcctttctctgaatcttatggttctggagcaaatgttggtaatgaggttgaagttgcatttgtatcgccacagcctttggctgaaaataacagagtgctcattatcttcagagatgggattatgtctttgtgggatattaagacgagcaaagtggtatctttatccggcaaatctatgcaacaacagtcacatcaggaggctaaagctgtaacatcggcatgctgggcttgtgccaagggaagcaaaattgctattggatttgatagtggtgatatatatctttggtctattcctgatattttaaatgcacaaaatctctcatcgatgggcaatcaaaacctacctcttcagaggcttaaccttggatacaagctagacagggtgtctatagtctctttgcgatgggtcaatagtgacggaaaggcagggcgtttgtatgttaatggattcagtgatcatgcatacctatttcaggtcctgattctgaacgaagagagcgaatcacgaattgtaaagatggttttgcctctcacagaagcctgccaaggaatggaacttgtttcagggcttagtgacccaaataagcacaaacaaagtgctcttgttctcttgttgaaatctggtcaaatttgcttatatgatgattcagagattgagcgctaccttcttcatgctcagtcaagatcgccactagcacttccaaactattcatctgtgaagctaccttatggtgatccaagcatcaccgctgcaaagttttataccagtagccctacagctgcgacttctttggatgaggactatttttcatcattggccaccaaatacccatggttcctttcaatgaaagataaacatcagacttccacaggttctgccgacattcataagaccagaaatctctatgtaactggacatcttgatggaaccataaggttttgggatgcatcatgtcctcttttactgcagaatttaatgataaagcaccagaatgaagagaatagtccaagtggcacccctattacatcattacagtttgatatgtcatccagcattctaatctgtggggataggagtggaacggtccgtataatcacattcagaaaggactccagcgataacatattctcctttttacatgcgaagcaaggggagagctataatgtcagatgtataaagcttaaaggcgctgtaacctcaatctctttgatctcgaactcaaagcgtgttgctgttggaacagaaaaagggattgtatcagttgtcagcattgaagatgcatcgatcttgtatcaaaaacagcttgagtgtcgggtatctggtggaatcgcatctttgcatttgaaatgtacagccataatggctacgacaaggatcttttgctag</cdnaseq>

Protein Sequence

<aaseq>MFVRKLVEKASKKHRIGGISGLRAEDVSPRLAFHYGVPADAALL AYDPALHVLAVAIRNGQIKLFGRDNTQALLQSPSPVPSKFLRFAEGQRVLLNVNAKNQ IEIWDIDTKKLCYVHPFEKEITAFSVLQNSFYIYVGDSFGNVSLLKLDLGQTCLVDMP YWIPFSESYGSGANVGNEVEVAFVSPQPLAENNRVLIIFRDGIMSLWDIKTSKVVSLS GKSMQQQSHQEAKAVTSACWACAKGSKIAIGFDSGDIYLWSIPDILNAQNLSSMGNQN LPLQRLNLGYKLDRVSIVSLRWVNSDGKAGRLYVNGFSDHAYLFQVLILNEESESRIV KMVLPLTEACQGMELVSGLSDPNKHKQSALVLLLKSGQICLYDDSEIERYLLHAQSRS PLALPNYSSVKLPYGDPSITAAKFYTSSPTAATSLDEDYFSSLATKYPWFLSMKDKHQ TSTGSADIHKTRNLYVTGHLDGTIRFWDASCPLLLQNLMIKHQNEENSPSGTPITSLQ FDMSSSILICGDRSGTVRIITFRKDSSDNIFSFLHAKQGESYNVRCIKLKGAVTSISL ISNSKRVAVGTEKGIVSVVSIEDASILYQKQLECRVSGGIASLHLKCTAIMATTRIFC </aaseq>

Gene Sequence

<dnaseqindica>6193..6324#5635..5747#5281..5338#5103..5195#4775..4965#4341..4665#3253..3634#3029..3101#2829..2932#2661..2752#2518..2571#2315..2399#2106..2239#322..360#acacaaataggagtactcagtctcagacagtgtgcagcattaggagggagaagcagaagaagagaagcccctaccaacctaatccttgactgctctccaggcacaaacgcttccattgccacctctcgttttcttcctctctctcacggaccctgtgttggtcggtttcgttcttggtttcctcgagcctgttccgtcctgattcctgaacaagaggttggcaactgcgagagaagttgttgccggagtgttggttcgtctgtccgtggattctttggttggtgttcttcgtctggtggtggtggtggtggtggatcggccatgttcgtcaggaagcttgtggagaaggcctccaagaaggtaactgaatctctcactctcctctccgagtcctctctgctttggcactccctcgatcggtttccaatttgcctcttgatttctggttaaagatgaactcttgcagttcttgtttgatgccgtgcagtagcagtatcaactacaatctgacaaaaaaatttcagagcatgtagttctgattaagtttgtattgtcactttctgctgtttagaacatattttcttgtaggagcaagaaaagaatgttgtctcttagacgccgtgccgtatggtttgctcgacagagatgggttgcctctgttttgatttgaatttctttcaaatttcaaacgcacacacgcgcacaattgccattggagatttggggtagtaataattaaggcagcgcgcagaaggccatgtgatctcattgaagtcgaagcaaatttactgttattgaatgcatatatagtttattcgatgcatacgcgaagcctacgatctttgttaatggcgatcgagatggataagaatttaggttgacgtcgtttcatactttcatgcatatggattacttctagtttgtacttttagcaaaaaaaaaatcacaattaaaagttttatgataaaaatatcttggccggtccatcgagatcaccgagattcgattattcttatgctcggttgcaatcagcgtaagtatcgccacgccggcttttgggttggtcgcgcgtttcagccatttggatttcaccgtcagtttagcatctttgctttggcctctaatgacaccgacccgtctgcatcatttctagctctgcaaatgcttaagttcattaccacaaattactcttgtgctaagcattgatagggggggtggggggggatgatcggtgaagaggtcaacgaatgataaagaaacagtcatactgtagtaagtagtaacttcgcagtggagcaactgatcatgaagtgaagtagttacagaacggaaaaaaggcaggtaaaaattcgtcataagttgaatgcgacagatatggctcatggctggcatagatatctgcaaagaaaattgtcgatgttaagttgggatatagtgtacggtcaacatagttttgtggttagtacgaagtatattattattctttttagtagagaaaataacacgatgagtgtgcagttgtcggttagcaaacatgattctcagtgcgtgttagtagatcatgatgacatctggatgtgttttttttcttttttttttatcgtctgacggtgactggggcatgtgcgtggccggttgagctaatgctggagtgctggaccaggacatccaatgcaaaacctttgcgtgctcgcgacacgtactcagtactacatgatctgaatatctgatcatactactttgtactatgatctcaaatattttcctcatttaatcttgggaaattcaaacgcgcgtggtatatggggcttccactttccctcgtttggacttttgaaagtttcgtgtaaattttcaccccattcctggttgggctttaggttgtttacttgtttatgaaaaaaaaaacttgaaaatttcgaatgtttttcttcccgacttatgaatgatcgtcttaagaaaaaaacttaaaattcgtaagagctcccggcgaggatcgaactcgcgacctttcgcttacgaagcgaacgcactaccactatgctacggaagcaactgatacattacggtcacgtttgcatttaactaccgctactactacgcagcatcgcatcggaggtatcagcggcctccgcgccgaggacgtgagcccgcggctggcgttccactacggcgtccccgccgacgccgcgctcctcgcctacgaccccgccctccacgtcctcgccgtcgccatcaggtagccgccccccccccccccctccttccacccgctctctcgctgacgcgctcttctgctgcattttctctgcaggaatgggcagatcaagctgttcggccgcgacaacacgcaggcgctgctccaatccccgtcccccgtcccctccaagttcctgcgggtatcgtcgctgattcttttttactcgaaatcccattgatctttgtttcggttgccgcgtttgcaattcttgggtgtggttcaacttcaagctcagttagttcgcacttccgtttcagtttgccgaggggcaaagggttctcctgaacgtgaacgccaagaaccagatcgaggcaagtttgttctcggacctttcagtgctcgtttggttaaatgtggtttcctttttggtgtgctgctaatggaaaatcatcttatgcagatttgggacatcgacacaaagaagttgtgttatgtgcatccgttcgagaaggaaatcacggcattttccgttctgcagaatagcttctacatgtaagcatcggttgctttacctactgctgagtcctgtggagttaagtgctctgattagaagatcttgtctatgcagctatgtgggtgatagttttgggaatgtgtccctgttgaagcttgacttgggtcagacatgtctagttgacatgccatattggattcctttctctgaatcttatggtaggtttactccaatatgtattggttgaattatcatactttacatgaaagataaaaatagcaccaactttggaatctaattgattcttgctgaaggttctggagcaaatgttggtaatgaggttgaagttgcatttgtatcgccacagcctttggctgaaaataacaggttggtgtctcttctgaatattctgtacatctcttccaaactagtttggcacaagcagttaagtattttatgccagatagtactcaggtgatcttttcatccattctatgtatagacgtagtgaaatgtctaattaaggtacactcttcagagtgctcattatcttcagagatgggattatgtctttgtgggatattaagacgagcaaagtggtatctttatccggcaaatctatgcaacaacagtcacatcaggaggctaaagctgtaacatcggcatgctgggcttgtgccaagggaagcaaaattgctattggatttgatagtggtgatatatatctttggtctattcctgatattttaaatgcacaaaatctctcatcgatgggcaatcaaaacctacctcttcagaggcttaaccttggatacaagctagacagggtgtctatagtctctttgcgatgggtcaatagtgacggaaaggcagggcgtttgtatgttaatggattcagtgatcatgcatacctatttcaggtgaaacactaaattagtgcattttatgttatcccccccacaagtttggactgccatgccgttttgacttttcagtcttagccgtttttgtaaatgtcacatgtttttttagttcttgaacttgtagaccagttatgactttagcttattgcaaccaacttgattagtgcaattcatcatgtgtgcctaccaagaatatcagtgaaataaattcaagcaattaagatgatactgattctatgttttcatgttcagtgcatctgaacgctaacatgcttttgcaacactaccacatagtgtaacagtttctttgtttaggagtctgtaacactgttttcagagccaactgttacttggtaggttagttgtgaagctactctcctgcccagccaggttcaactccaggccttttttctccttgggtttgactcttcctgttttttctcctcccagttactccctttttcttaagattgatctagactggttcgttacctgttctaagactagctgatttggaatatgatatattatttaaaataaatgctcagctagaatcctagaaaggctaagaaattcttgctcgaaacaatatttgaacatggctgaaactactatttcttttctaaataatgttgtgttaaccgacactggttgacattcagcaagaacattcaacctttcatttgatgttccttaaacacaggtcctgattctgaacgaagagagcgaatcacgaattgtaaagatggttttgcctctcacagaagcctgccaaggaatggaacttgtttcagggcttagtgacccaaataagcacaaacaaagtgctcttgttctcttgttgaaatctggtcaaatttgcttatatgatgattcagagattgagcgctaccttcttcatgctcagtcaagatcgccactagcacttccaaactattcatctgtgaagctaccttatggtgatccaagcatcaccgctgcaaagttttataccagtagccctacagctgcgacttctttggatgaggcatgtatagatttgtaaattacacctatcaaacaactatgaatgctttgaccagatagcgtttttaatgggctttgaccaaatagcttcatattttgatgatggacaggactatttttcatcattggccaccaaatacccatggttcctttcaatgaaagataaacatcagacttccacaggttctgccgacattcataagaccagaaatctctatgtaactggacatcttgatggaaccataaggttttgggatgcatcatgtcctcttttactgcagaatttaatgataaagcaccaggtgacttaaaactccaattatttttgctggccactctctaattatgtattttgctgaaaattctctagttatgcattttgcacacaaattactacgttttacttcgttctaacaactcattattgttattgtttcagaatgaagagaatagtccaagtggcacccctattacatcattacagtttgatatgtcatccagcattctaatctgtggggataggagtggaacggtaagctatttcatggatataaggtgaattataatatggttttaatacacttccagtgcagtaaaactttttttcttcctgttaggtccgtataatcacattcagaaaggactccagcgataacatattctcctttttacatggtataatttactctctgtcttgctaatatcaacagttggtgcttgccttactatgtggttaggtgttcattgtccaaagaatttgcactgcgatactatctatgctcgtgctagctacataatttactccatcagttaattttgtggaacatggaaactaatggaaacatgtccgatcttagaacttcttgatttcaccatctggtccaaatacctttgttaatggtacctttaacatatttttcaagtgcttgtatgttattttaacacattcatcttttacatggactggtcagcgaagcaaggggagagctataatgtcagatgtataaagcttaaaggcgctgtaacctcaatctctttgatctcgaactcaaagcgtgttgctgttggaacagaaaaagggattgtaagtaatctgttatgtttttgcaaaatattctctactgtcatttttctcttaacgacatgtctgtatcatgtcaaaacactaagatgataagcttgtctagagcaacatattgtacaatcgtaggttattactaacaaataccagtatttgattggtattctgcctaacaaaaataagtagcaaacttgaattgttgcagacagtattgaagtattttccttttgagaaactgagttatatagtctcataatttccccatatactttatgttttgccttttatggtttacgataactaatatcatgcatattagtggccccctggtcattttgatgttacaatgtatctatttcaagtgtatatctcatgaacttcactacctatatatttggctcagctgtcttaagctctatgaaatgctatactgaattcatgttttcaggtatcagttgtcagcattgaagatgcatcgatcttgtatcaaaaacagcttgagtgtcgggtatctggtggaatcgcatctttgcatttgaaatgtacagccataatggctacgacaaggatcttttgctagtaggaatggaagattcaactatatatattcttgaggaagaaactggaaaacttttgaataccaacccagttcagacaaactaaccctcccgagccctattgatgcagacacttggtgagctatatggccttgtatacccatccatctttcttttcaatatctacctatcaatttttctgtacgctcaaaattagtaactatattgctgtattatactaccattctaatacatttatacatgacagaattatcaccagatgatccatcgttgtcagatacccacgatacagtatcgaaagaatcactgttattgctttgcactgaaaatgcaatccgcttattttccttgagccatgcaattcaggtatttttggttcccaattatttattggaagttctacttttatgtgagtttctatttttaatcgtggagctccccttcagggaacaaagaatataatcaataagaagaaaccaaatggtagttgctgttttgcatctcttatccacagtgtttcttctgaaattggacttctacttgtcttctccaatggcaaaatagagataaggtggggcaacagttgagttaaaaactttgacacgcatgaggctatttgaatgaaataaatgaacagtgaaccttgtgaaactgcagatccctcccagatttatctatattgaaggaagcctctttaagaggtttttcatatacaagaaacttgaattcttctagctccatagcatgttcatctgatggagaaatcatcttggtatgaactacaccttttttttctcttacacttttggaagacattttcagctaggttgaatgtagctttcaatctttttagtttcagaaaaaaatggggcctttgtgtatatactatagcctttttattatgcaggttaatggagaggagacattttttttctctactctctgtcagaatgacatctacaggtatgctgaaaattttatagtatcatgattagtatatgaatctgataatgatgatcatgttaaaaagttgttcagaaaaattccaacatgaattgcaattttttggcccagcaaattcattattcaatactagagctgaacctaaaagcattaatagctttcttcagggttcttttaagattgctttgtaacattgttgttttactatgctctgtactcaggcatgtagacagcattaatacaatatacagaaaagacaactcgcccagggaagaatcttcttatgtagtgaagtcccccagagaaaagaaaaaggtaattaactaatcttatgggtggtgggggccatttgtctctgttttttctaagaatgaaaattctacagggcatattcggaatgattatgaaagatactaaagcaagcaagggaaaacagagcgatgcaaatggagatgaacaatttactgcaacaacttccgaagagctgtcttcaatattttcatgtgctaattttgctccagtatctgagaagaggaacagttcaataaaagatgacgagaacattgaactagatataggtatgtgttattattttacctatgcttgatcaagtgtacggcgtagttatacttatggttgtatgcttctgtgaagatgatatcaacattgatgataacccgcaaaagcagaaaggaccacacttcccaggtctaagcaaacagaaaatcagcaagggattccaaagcctaagaggttagtaaattatagtaatgagatgagatgttcacatgcaaccttgtatacagcgtatggctccgaaaactgacattctaaaacaacttaaaaaggtgtcatattattcaattatgaatttgcagaaaagttgaagcccaggacagaagaaaaggtgaattcagggaatagaaaacctgaagacgacacatcagtcagtcaagttgaccagataaagatgaaatatggatatgcaacaaatgatgtgagtgcatagaagggctagaaatctaacatttttagttgacgcaccgcaaaaacgtatgtaattgaactgttttgacgccttcccttatcatttttaatgtttatctgaacaggaccccactagcctaccaaaaatgattgggaacaagctgcaagagaatataaaaaagttggaggtaagaatgtccatctgaagttctccatatggattgctacaaaaaccgtctaaaagaacacaaaaaattacctgaaaatattgcctgaaaagacacccaacaggtagatggttaacatatgtaccaatgttccttttgtagggcattaatattcgcgctggagatatggccaacggtgctcaatccttctcggcaatggcaaaagaactgctgcgaaacacaaagaacgagaaggccacatcgtagaaatggcacatacatgtaccttcccctctcagttttgagtgttcctgttcattcagtgcagttcttctaccgcatgaaataattctgttgtaaataatgattgagaatcacagcaagaatttactggtgaatttctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0564700, RefSeq:Os04g0564700