Os04g0566800

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0566800| Description = Spc97/Spc98 family protein| Version = NM_001060119.1 GI:115459967 GeneID:4336693| Length = 4624 bp| Definition = Or...")
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Gene Name

Os04g0566800

Description

Spc97/Spc98 family protein

Version

NM_001060119.1 GI:115459967 GeneID:4336693

Length

4624 bp

Definition

Oryza sativa Japonica Group Os04g0566800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28882544..28887167

Sequence Coding Region

28883085..28883255,28883740..28883896,28883984..28884045,28884211..28884310,28886503..28886582
,28886869..28887032,28887124..28887166

Expression

GEO Profiles:Os04g0566800

Genome Context

<gbrowseImage1> name=NC_008397:28882544..28887167 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28882544..28887167 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgagcaaccagttgtttctcttaaagcctctacatgtggtcttgatgtgctggacgacatcttattgggctataaagttgattggccagtgaacatcgtcattacagaggaggcacttaaaacatatgctgaaatatttcggtatcttgttcaggttaggcttgcagtgttttctctgactgaagtgtggcgatttctgaaggagttaacacagttaatcagtcgttccagccataatagacctgatgttttaaaggaattgagttctgtgatgaaactgagacatcaagtttatcactttctatcaacactacaacagtatctccattgccatttgtctgatatatcatggcgccgttttcaacattcacttcaacatcaggtgagagatatgctggatctcgagtatgtgcatctatgttatgttactgatgcgcttcacatatgtttcttatctgctgaaacaaaaccaattgctgccataattaatagcattctacaacaagctttggagttgcggtcatgttttaagagcctcaattacatttctgagtcaacagtaaaacaacttaatctggattctcttataaatttctctcaggtggacgctattagaacgaagtttgagggtaatatcaaagatttgtatattttgcatttgaagtcttcgaaatatggggagattggtctttatcgtttctgggggtatcttaactacaatgagtatcattccttgatgatcaacaaagatatgggctgcttctatttctaa</cdnaseq>

Protein Sequence

<aaseq>MNEQPVVSLKASTCGLDVLDDILLGYKVDWPVNIVITEEALKTY AEIFRYLVQVRLAVFSLTEVWRFLKELTQLISRSSHNRPDVLKELSSVMKLRHQVYHF LSTLQQYLHCHLSDISWRRFQHSLQHQVRDMLDLEYVHLCYVTDALHICFLSAETKPI AAIINSILQQALELRSCFKSLNYISESTVKQLNLDSLINFSQVDAIRTKFEGNIKDLY ILHLKSSKYGEIGLYRFWGYLNYNEYHSLMINKDMGCFYF</aaseq>

Gene Sequence

<dnaseqindica>3913..4083#3272..3428#3123..3184#2858..2957#586..665#136..299#2..44#tatgaatgagcaaccagttgtttctcttaaagcctctacatgtggtaataatgatttcatcttggattatcttgggctacagttccttggggcttgattgctcagattattaactgcccaagttttcactgccaggtcttgatgtgctggacgacatcttattgggctataaagttgattggccagtgaacatcgtcattacagaggaggcacttaaaacatatgctgaaatatttcggtatcttgttcaggttaggcttgcagtgttttctctgactgaagtgtggcgatttctgaaggtacttttctccttcaatgttttcttatagcaccttttcatttggatgtaaatcccagaaccttttccccacttcttgacagaagccattatatagtacctgtagtgctgtattaagtgatagtgaactagcatttattaaatatcagtagttgaatggattataaatgatactttgtttgttctcttaatagatgcagtacatatatttgcatgagatcccctttttttttcatgtaatacatttgttatatatgctaagattgtcttgtgcaaactgatttcaggagttaacacagttaatcagtcgttccagccataatagacctgatgttttaaaggaattgagttctgtgatgaaactgaggtaccaatatcaaaaagtcttcctacaattttgtggcgtccaaccgtacattcctataaacaatttggcaattggcaccactcactgaaatattacaaactcaatgcgtgttctattcaaaatcctgaactgtttgttatgttgttaaaactttaagtttctgggattttatcgaacttgcagtatttaggcatttactttacatgccataaggcccataacaaaagtaattattttcaatattttatataaattatttattcagcatgtttagcattagctcatcaaagtcaaacctacttccaacatgatacttgaaagagctaaatttgacagagtaatgtagtttttttgtaaagcattcactgcagttttatttcaaaactctgtttctacagcataacatttccaagcattagaattagcaaatacacagttcaaagtgacaaataagtgaataagtggtgtttgatggagaacaattatagtgcttccaaaagactggtctcctgtgctcccagcacacataagtgctatcaaattgtcatttgtgtgtaaaaaaaagggaattactaaatgtcattcgccagaaaatctgccttcaaatcatgcagattttgggccatcggatgtactttgtgattcgtgctcctgcccttcttcagctccggcgacctcatcttcttctccggtgccggcagcacccccaaacttcagtggggacctatggattagggtccggtagttggggttagggtgggagaagggtggggggagttcttcggctttagagagatggccgtgggaggcggcagctcggcggtgggtggtggattgggcgggcggtgaggcggctgcagctaagtcaccgggaacgtggaactatgccaacttcctcgtcccgggaacgcgggaataatctcgttccccccatgttaaaacatcaaaaaagtagcgtcccgctttcctcgatcctgttcctcgtcacattgatctgggagcttttgtgacatagggcggcggcgccgctgaagccatgggatcgtaagcgagcggtgggggaaagacaggactggttaggagaggtggccggtggtggcaaatctggtggcggggaaccgctggagacgaggaagacgatggcgtgggggcagctcaccgccagtggcttgaggaaaaggagaggagagggagggggaggaggccagccagggcagcgccgttgacgccttctagccaaccggtgaggccgggcggcagcacggtcgagacgggatgggtcgcgaactcgccctggttagtggcagcggcgtgaggggagtcgggaaaaaggggatgatgagtttttgtagggtttagttgctttgcacgattcttaaagcagtcgggtggtccagaatctgcaagatttctaggggagtattctatcaaatggtatatagacaatccaaaaataaagagatatgtgtggcatcgcggatcatagagttatgcaaaatttcgattcagaacacattgtacataaaaattgcctgaaccagcacttttattctatcaagattgttgagacgaattttggcatgtttgtaaataccatcattttgcacacctccgtttttttccaaactaaaaattactagataacactttgtatgttcaaagcatgagagcaccaggccttttgggagcattggagttctcaataggtagactctatccacgagaacactatttttatttgagtaatcaaatgttcaaaacatccaccaatcagcaattttttgaacactgaatgacttacttcaagtaaaagaaatataaggccaaacatatttagctttggctgtctaagttcataatttgaatgttcatattacagatatgaaattaagaagtgcatattttttgtcaaaaagcactaccatagcattgtaatatcactaggttttgtagatgtatgacaatataaactaggggtcaaagctgtatgatattataattagtggtctttttgggagcactagaactgttctaactattgcagattaacaaaccaacttttctgttgcctggtaggttccaattcatctttactcttccgttgatagtcatcactgtgtcaaatatctctggaatatttggtttttatcagtatgtttcttggcattaacaactcttttctgtttattcagacatcaagtttatcactttctatcaacactacaacagtatctccattgccatttgtctgatatatcatggcgccgttttcaacattcacttcaacatcaggtatacattcctgtaaatacgatactaaagctgtttccatattaaacataaaatgattgctacactgtcctgtgatgattttgtcctgtaacatgttttttatatcataattttacttctgctggaaggaaactagtggattgatgatcttcaattattgattaggtgagagatatgctggatctcgagtatgtgcatctatgttatgttactgatgcgcttcacatgtaagaccttttgtgttatggaaagattatttttctgatgcacaaaacttacaggttattctaattggtcgttattctaatgttcagatgtttcttatctgctgaaacaaaaccaattgctgccataattaatagcattctacaacaagctttggagttgcggtcatgttttaagagcctcaattacatttctgagtcaacagtaaaacaacttaatctggattctcttataaatttctctcaggtattctctatatttcaaatgcagagatgaaagaatatttggactatgtgctttgatatttgatttgcttaactactgaattgtattctggcaagtaatctgtactttgacaaaatgtatgaagagcgaagatttatcaaatgatacacgaatggactgtcatcattttttatttttttcgatttaacatccttaaaatgttgaaatatagttctgaatccagtaatttatcctattcgttaacatctgacatccttaagtgcccacatccagtaatattggaccttactgtttcgtcatgctgcatgtatacttcgctatttcgttcacatagtagctgatttgttctatcgctggtagctgtcttgctgagatatgctactgaaagttgcagcgcaacagagacttaccatttcttcctatcatctaccagtaggttctatatatcacgttcttttaatcactttctactttttcaaaacaggtggacgctattagaacgaagtttgagggtaatatcaaagatttgtatattttgcatttgaagtcttcgaaatatggggagattggtctttatcgtttctgggggtatcttaactacaatgagtatcattccttgatgatcaacaaagatatgggctgcttctatttctaatgggaaatcgtttttaaccaaagctcaagtatcccctttatcttctgtggctagcttgccttttacaacaatttgatgacagcatgttctgcctttgattgtactgctagtaagaagaggtgcatccctttggtctgctcaatcagttcacattttgcaccctcggtgacacaggtatgtttgtacaattgtctgtttctgaatatgcatcactagagcacgctgctgaggcttctcgtttcctttcatttcggaaaggaggaacacactgctagtctgctaccatcgcagagcatgaacttacctgaagacagtagttccttgtatgaactttcctgaagtaatagtgatctttagagtttgagcattgtatggagttttcacttgatagaatagtggttttgtggaaaatacgaggctaggaatgaacttcaaacatccaattaaaaggaaaacaaaattgacgtgactgggaatgcatgttactattgtatagctgtaatctgagacatggcctggtaaatcaaagctgtgattgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0566800, RefSeq:Os04g0566800