Os04g0566900

From RiceWiki
Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0566900| Description = Conserved hypothetical protein| Version = NM_001187123.1 GI:297723376 GeneID:9266856| Length = 5017 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0566900

Description

Conserved hypothetical protein

Version

NM_001187123.1 GI:297723376 GeneID:9266856

Length

5017 bp

Definition

Oryza sativa Japonica Group Os04g0566900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28887907..28892923

Sequence Coding Region

28891241..28891978,28892528..28892701

Expression

GEO Profiles:Os04g0566900

Genome Context

<gbrowseImage1> name=NC_008397:28887907..28892923 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28887907..28892923 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgcggcctccagcctctcgtcgctgctcgccaccctccgagtggtcggcccgtggacgccgccggcaacctgggagtccgtcacccaggctggcggtgccgcccgtaccgccaaccctggagggcggctccggggggatccgatctacgagctcgcatcggttccggatgcttctttggttcgtttggctttgcatgcactgcatggtgtcaaatcatcattagatgagattgaggagctctctgtgctgttcttctcatgtccggctgataggacttctcatcgtgttgcaaacgtgtggtcacgttcatccagtactacctctgtagggaatattctcaaatctatacgcactacaggtctttcagttctcttcctgtgcaagtttctgcatttttatcttttccaaagtcgagaattgaatggtcgaggtagagaaggacatgaacatgaagtttctgatagcgaagaaactgaacaacctgctccttacagtttagtgaaccaagcatttgctgcagcagttgaaaaggttttagaaggttatttttgttccttgaatactctaccagcatcaattaagctgaggcgtttggagggacaacctgatataccttccatgaccccagatggagctagttataattctaattctgaaatcactcttctggaagtttatctccacactgaggagttaagaagacatattaagtccctcggaaatatatgctttccgaagtttgcaggtctttcgttgtgccaggagggtttgacaactgattctaacttggggtttgagaacttcccatggagcactgatttgctttcctatttgtatgtccatcttcgtgtaagcaatcatcttatgatttttaaccatacaacttctataggaatatcttga</cdnaseq>

Protein Sequence

<aaseq>MEAAASSLSSLLATLRVVGPWTPPATWESVTQAGGAARTANPGG RLRGDPIYELASVPDASLVRLALHALHGVKSSLDEIEELSVLFFSCPADRTSHRVANV WSRSSSTTSVGNILKSIRTTGLSVLFLCKFLHFYLFQSRELNGRGREGHEHEVSDSEE TEQPAPYSLVNQAFAAAVEKVLEGYFCSLNTLPASIKLRRLEGQPDIPSMTPDGASYN SNSEITLLEVYLHTEELRRHIKSLGNICFPKFAGLSLCQEGLTTDSNLGFENFPWSTD LLSYLYVHLRVSNHLMIFNHTTSIGIS</aaseq>

Gene Sequence

<dnaseqindica>946..1683#223..396#cggctctctccgaaaccgcgggcaggtgacggtgacggcgacggcgacctccctcccactcccaccctctcgccggagccagccagccagccaccacgtctccggcgatccgtacctcactgccgctcgctgcaaccagcacaacaccgctcctcctctcattgcgttcggaataaggcctgacattggaggtctaaaccctagctgactaccgttccccggatggaggccgcggcctccagcctctcgtcgctgctcgccaccctccgagtggtcggcccgtggacgccgccggcaacctgggagtccgtcacccaggctggcggtgccgcccgtaccgccaaccctggagggcggctccggggggatccgatctacgagctcgcatcggttccggtgagtgaaaaattacccaccaatgcacttcgattcagtgttattttgagcattttcgccagagtagagctcagattgctgagctagtaatgagatttttgctgcatttcaacttctgtaaggtgtgatatgctttggatggagtatcttgtaaatgcaaattgtgatgcgtttgttgattgtgtttatcactagcaggaaatgtagcacgagatcatcaggaatatcctactcgttgctaggaatgacagtagggtggtagctaaatggtgaaaaggccgggattcattcaattatctaaaaaaagctaaatggtgaaaaattagaagtaccctttgtcttgggatctacccaattgagtagatctgcatgattttttaaagtaagcgtgttgatctgatgatttattatgtgaagaaaggtagttgggattaaccagagaaatgatcatcatttatcatgacaagctgagtcttgagttgtgacattttatttactgtctctagttgtctactggtgatgagtctgatgatcatctttcttctgcaggatgcttctttggttcgtttggctttgcatgcactgcatggtgtcaaatcatcattagatgagattgaggagctctctgtgctgttcttctcatgtccggctgataggacttctcatcgtgttgcaaacgtgtggtcacgttcatccagtactacctctgtagggaatattctcaaatctatacgcactacaggtctttcagttctcttcctgtgcaagtttctgcatttttatcttttccaaagtcgagaattgaatggtcgaggtagagaaggacatgaacatgaagtttctgatagcgaagaaactgaacaacctgctccttacagtttagtgaaccaagcatttgctgcagcagttgaaaaggttttagaaggttatttttgttccttgaatactctaccagcatcaattaagctgaggcgtttggagggacaacctgatataccttccatgaccccagatggagctagttataattctaattctgaaatcactcttctggaagtttatctccacactgaggagttaagaagacatattaagtccctcggaaatatatgctttccgaagtttgcaggtctttcgttgtgccaggagggtttgacaactgattctaacttggggtttgagaacttcccatggagcactgatttgctttcctatttgtatgtccatcttcgtgtaagcaatcatcttatgatttttaaccatacaacttctataggaatatcttgaccttttgctacttgatggcttttatagttatacttttgctaatgtcttagatttgcatatcttattaacgatgtcatagatttttatatgttaattaacctgagtatttcagattcactgcaagtatatttatattctttgatactggcagtatccacctgtacagtagctgagattacatatattcatgtgtatatgatgttgtcctttctaaacataccattatataatctggtaggcaaacttcttattttttcaagcttttttgtttttatgattcagaagggagttctgatggggaaatcaactctttaaagctgtttctttcacgatttcacccttgtcttatatttccacttctgataatatagctctgagcctctgaagacctcctgattcaagaatagttttcaaagatactgccagctatttatgctagtctattctttacttgacaagaatgatatgaatattgtcttgcttctctgtcacgaatttttcaatttggataagtcatatatcattgttctgtagatagctcatgccaaatgttgaaacattcctgatattgtttctcttgaactttaggatgccgattccgttcactatggacttctaaaatatctttttgttcgttcttgtgagccatattgtaatttcatcaagtcctggatttaccgagcttctgttgatgatccttatgaggaatttctcataactcaagctaagaataagcgaactcaaggaggttcttcagacccagtagataatttcaccctgttgtccttaaaggtaagatttgtgtaaaatttcctccttaatcaacagaatttatgtttaacaccaaagtcctagtatatggcccattgtctgttcatatactatctatcatttaggctctgtttgtttcggatgttcagccgagctgatcagctgcacaagtaatgaagtggcttattagagattgattaattaagtttttaatatttcaaagttgataaatggatttattttatacatgagaagtttttttttttaaaaaaaaaaatctcaccatttagcggcttgggaagcgtgcccatgataatctaggtatgtagccagctcaaactttagaaaagaatggagccttaatcttactaactttgaactagacttgaattccgtttatgatgtgttattgtcaacagggagcaaatcatgtatctgcaccatgctttctaaaagatgtatgtggtcctcttctgcgcactggacaacaacttcaagtgctcatgaagcttctagaatcgtgtaatctttctgacactggaggagatgctcatgcatctcgtcacatcattcatctggaggaaattctcccatggtttgatacgtccatcgagtcttcaatgaattcattcactttctcaaaaagtagggtggaagcagtaatatgtcaaagagatgctatgtacaagtcaatgatagagaagctccatcactttttctcaaatgttgaggtctagttacacatactgaattacagtctattttcagttactgcatttgactaattatatatgtgaggctctcttttgctctaagagaagcaagaacatttgcttcctaaaagggcttgcatattttatgttgaaactttgctgtcagcactgaagcttgagcttttccctcaaatggacatttcatgctacctttgcttctgtttacaaccatgttttgaattattcatttgacaaaaggctggttttcaggtaattccttttgatgcggcactgaatgttctgcatataagtacaagccctctagatacagctgtttcagatgtggagctgttctatcatggcacaaatgctctaccagcttgcaatgtgtatgttgtggatatacctttattgcaatggctagctgtttttgaatattcatcttccattcatttcttctgtggttcattgtgcatattttattcgatatgtctatgcttgcaaacaactagacataggagatcataagtctgtaccacacttcttgtagtctgatttgtctttttttcttgtcctctgtaatgttagggttgcagagcttaaagataatgatgcttcttcaacatcacaagaatcttcagataaagtggatgcattagaatcatcggaatcatcttcatcatatagttctattgatgatattgaagatgagattgatactgcttgtgataatatgcctagctcgatgttctcatcgtaccgtgcaagttcaggtgaagcaaaatgctcatctgtaaccacaaagttactttcatatgaaacctgttctgtttctgatgggattaatcctgctagccctatcaatgagaacaagaaaaaggacgacttgagttatggacatgttcctatgcactcgcagagtatagaacatgacgtggtctgtgatgctttggaactggacaatcaatacagtgaattttggccattcgacagtttcttgaagaattcattcgatatatcctctggaaaaatgagtttggctgaagagttcttatatacaggagataaaggtgcagagcaagtatcacatgccaatgttgtttgtcgacactctgaatcagggtctcctagactgccaaatagggataacgatgaaaaatctatcaatataaagcaaccatggaatactaacattccttacaattttagcattaatccaatagtgaagaatgcggtttcttgtcatacggagcatgacttgcatggaaataggaagaaccaagcacttattggctttaattttgagtcagtaactaatccatgtgaagcatattgtgggagaagtacttcttcccttgatgagtttgaagtcagatctgcaatggctgtacagtccaatgctcaggcttctaaacagtttgattgttccagcaagcttcttcaatcgaagacaacaagtcatgcttatcttacttccccaggagacatctcagcacaaacaaatcttctagaaaatccttcgggtggggcattctgggagaaatcattagagtacactgctaaatcaatggaaatagctggagataccacttcatcatctgatatgccacttgatatagctattgacaagtgcattatacaagaagttttgctgcagtatccttgtggttttcctacaattttgtcttggtatattgctgctggtattcttttcaagtctgggcattatttttttcttgttttaatttattatagttttgaactatatttttccttgttctagcgttttggtacctcattttcttgtgaaatttttggtattgcatgatgctataaatgcattttgaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0566900, RefSeq:Os04g0566900