Os04g0568900

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0568900| Description = Similar to RING finger protein 6 (RING-H2 protein)| Version = NM_001060128.1 GI:115459985 GeneID:4336703| Length = 3...")
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Gene Name

Os04g0568900

Description

Similar to RING finger protein 6 (RING-H2 protein)

Version

NM_001060128.1 GI:115459985 GeneID:4336703

Length

3342 bp

Definition

Oryza sativa Japonica Group Os04g0568900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28990575..28993916

Sequence Coding Region

28990959..28991135,28991607..28991771,28991883..28992015,28992115..28992234,28993588..28993796

Expression

GEO Profiles:Os04g0568900

Genome Context

<gbrowseImage1> name=NC_008397:28990575..28993916 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28990575..28993916 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctccggacctgggtcgccggctacgccctgcagtgcgtcgtccacatggtctgcgtcgccatcgagtaccggatgcgccgggggcagcgtgacagggccccggcgtccgccgacgaggaaaggggaagtgacgggtcgtcttcatctagcgatgatgatgtcacggaggacgatcgccgtggtagctgcaccgattgcgtcagtattgcaaagcacctggagtcagctaatacaatgttctccttcatatggtggataattggattttattggatatctgctgggggtgaggatgttatccgtgatgcacctcagctttactggctttgcatagtctttctggcatttgacgtgttctttgttgtattctgtgttgctctggcttgcatcattggtattgctgtatgttgctgcctaccttgcattatagctattctctatgcggtttctgatcaggaaggagcgtcagaagatgatattcgccaaattccaagatacaaatttcggagaacagatgaacctgaaaaacaaactgctgatgagacaggaccttttggtggaataatgacagagtgtggcaccaatcaacctattgagaaagtactcgcacctgaagatgcggagtgttgcatttgcctttcggcatatgatgatggtgcagagctgcgtgaacttccttgtgggcaccatttccactgtgcctgcattgataaatggctgcatatcaacgcaacatgccccctgtgcaagttcaatatccggaaaagtggcagtagcagtggaagtgaagaagtatga</cdnaseq>

Protein Sequence

<aaseq>MPLRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERG SDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVI RDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASED DIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGTNQPIEKVLAPEDAECCICLSAY DDGAELRELPCGHHFHCACIDKWLHINATCPLCKFNIRKSGSSSGSEEV</aaseq>

Gene Sequence

<dnaseqindica>2782..2958#2146..2310#1902..2034#1683..1802#121..329#gagcggcaggcggactgggcctactcccgccccgtcgtggcgctcgacctgctctggaacctcgctttcatcaccgtcgccgccgtcgtgctcgtgctcagccgtggcgaggactcgcccatgccgctccggacctgggtcgccggctacgccctgcagtgcgtcgtccacatggtctgcgtcgccatcgagtaccggatgcgccgggggcagcgtgacagggccccggcgtccgccgacgaggaaaggggaagtgacgggtcgtcttcatctagcgatgatgatgtcacggaggacgatcgccgtggtagctgcaccgattgcgtcaggtaaatggaaggatctggctagtaagcgtgtttcctagtccgtgttactcacgagcggagcagctcagatttacgatacagtaatagggaaatgtttcttctgtttgcccttacgcaagttcttaccacggtataatgagccttctattagtatgaagaaagaggggtgagtagaaaaggctagataagtattatactcagttttaacatgccaagttttatgcatggtttgctgttctatgatgtcctagaaatatttatgttgagcatatcaatcaggctaatgtcagtaagacaaagtggctctgtcatacataggatactgattacagtcatgaagctcactccagtcagtcatgcccagaatttctagcctagtattctcttctaagtgggtttcaattacttaagaggtcaaataatctagcgttgcttgttctcatgacatagcaacagtgttgtgctttgaaattggtatatgcgcaccataagaagctaagagtggatcctcctaaataagctataaattcaattaggatagtataagattgtacctgcaaaatcatttccttcaacataaactagacaaaatgaataacctcattgatgttcttttgtagctgtatatgtgtgttatgcttcaatatgctaaaagaaatgtggtctaatttatgggctaaggcatctaatggatccaacgttacctggaaaatgacatttgaatgagtggcacataacctgtttaggtttctttttaagacacaaattatacgctatttggtattcagtgaagagacccagtatctgattggaaaggtcaactgaagacttttgtgacctcaaaacctgattcttttttatgttttaatacacatttctgcagtctcattctattgactatttgactgttctatttttttaggcaacacataagtttataactgttattatatgagtttcttagtgatgaggatgattgaggaaacatgcttcttacgctgctagataatattcaactgcatagacaattgataaaaacatcttccaaataaaacattggtctgttccttcccttttgttttctctatattgaattatactgcagatgtctgtctctgttatgtcataacatggtttgctgtttcctcatattcataatgcggcttgcttctgtcttctactttaatttagtttctgaatgctatcgcactatctagatgtgctgctatggaaaattcattctctctattaactattgtatcatgtgattttatttaacaatattgatattgaacacatgacctctcctatatgtcttgtgccttattatttttttattgttaactctggcagtattgcaaagcacctggagtcagctaatacaatgttctccttcatatggtggataattggattttattggatatctgctgggggtgaggatgttatccgtgatgcacctcagctttactggtatgcatctttaaattaacagtcggcttttcataatgtcgtcatttcattatattcttttggcacggtaaacatgtttctgtatgactcactttgcaggctttgcatagtctttctggcatttgacgtgttctttgttgtattctgtgttgctctggcttgcatcattggtattgctgtatgttgctgcctaccttgcattatagctattctctatgcggtttctgatcaggtatggcttttcaagtagagataaattggttatgtacatgcagaagatgtacataattttatatgacattcatgcaatagataaccttttgcaagatcttattggaatcaggaaggagcgtcagaagatgatattcgccaaattccaagatacaaatttcggagaacagatgaacctgaaaaacaaactgctgatgagacaggaccttttggtggaataatgacagagtgtggcaccaatcaacctattgagaaagtactcgcacctgaagatgcggtaagtttttataaatttgtgatacatgtatctctgaccataacaatgcccgaggtgctaaaactcaaaaccttttccaattttattttagacagactcacatcgtatcgcccattcatcatgactgttgtactctgtctagtaaattcgatagtgtgaaggcaagggatactgaaacaatgattatgtgtttgccgtagctcatacatcataaaatattttcaacttttggtgaatgtatttgtttgtaaaaaatcgtaatgaaccatttattcaacatacaagttaaaataggaatgattcttacccaattaaccctgaccatgttttgaccaaaccgtttattccagccaatactgccatgtgccaagctatgcaaaatccagaggatgcacaggataattatcatgtccatgctgaatctctatgctatatgaaactttagattcattcttcacttgactactgcaggagtgttgcatttgcctttcggcatatgatgatggtgcagagctgcgtgaacttccttgtgggcaccatttccactgtgcctgcattgataaatggctgcatatcaacgcaacatgccccctgtgcaagttcaatatccggaaaagtggcagtagcagtggaagtgaagaagtatgattgtgtgaatatcctccggtcgagaacaccgatccatttcaacttcacacctgtctctgctaatgcaaccacaggacctgaccagtgtaaattttgtatccaaaatgtgtgattagcgtcatatatgtacttgaagtgactcaagactgctgttcatatccacatacatggttgtccaatgtgtcttttactgtccggaatacatgcttagttgccccgtgagttgtaattcttcgagtgatcctcacatttcctgcttgtgttagcatggtttgtgcttatgctcctgccttggtcattggttcagcacaaaaactgttgtaaatgggctatcggtcctgttgaattgtcaggtacaaacgaaatgcgtcctgcttatgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0568900, RefSeq:Os04g0568900