Os04g0569900

From RiceWiki
Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0569900| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001060133.1 GI:115459995 GeneID:4336708| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0569900

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001060133.1 GI:115459995 GeneID:4336708

Length

2544 bp

Definition

Oryza sativa Japonica Group Os04g0569900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29062389..29064932

Sequence Coding Region

29062620..29063345,29063433..29063510,29063658..29063834,29064351..29064764

Expression

GEO Profiles:Os04g0569900

Genome Context

<gbrowseImage1> name=NC_008397:29062389..29064932 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29062389..29064932 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgggcgtccaggtggctgcgcgggctgctcggcggcggcaagaagcccaactccggctccggcgacccgaagccggcgagggagaagaagcgctgggggttcgggaagtcgttccgtgagaagtccccggcccatccgccgccgccgccaccgccgtcggcggcggtgcagagggcggtgacgccacggcgggcgtacacggcgtcggatgagggggacgacgagcagagcaagcgggccattgcggtggcggcggcgacggcggcggtggccgaggctgccgtcgccgctgcccaggcggccgcagccgtggtgcggctgacgagcagcggacgatgcgcgccggccgccgccaagcgggaggagtatgcggctgttcggatccaggccgcgttccgcggctacctggcgagacgggcactgaaggcgttgcgagggttggtgaagctgcaggccctcgtccgcggcaacatcgtgcggcggcaggcggcggagacgctccggtgcatgcacgctctcgtccgagtccagaggcgggcgcgcgcgtgtcgcgctatccgctcccagcatgtctcggcccatcccgggccaccgacgccggagaagtacgaccaggcgactcacgagggcgtgcctaagcacggccgttctggttctctgaaggggagctcgtcgaagacgccgggaagtgagagactgacccgggagaggtcagaatcttgcgggaggaactggcttgacaagtgggtggaggaacggtatttggatgacgagaagaacgccaagattctcgaggtggacaccggcaagcctgggcggcacgcctcacggaggcgcagcggcagccatcaccaccactcgtcatgctcgtccatgacatccgagcagaagagccggagctacgcgaccatgccggagtctccgtccaaggactccacgaccgcgcagcagtccgtgcccagcccgccgtcggtgggcatggccgaggcgctcagcccgctgctcatggccgtcgacatcgccgagctctgcgacagcccgcagttcttctcggcgacgtcgcggccggggagctcgcggagcagggcgttcacgccgaccaagagcgagtgctcgcgcagcctgttcggcggctactccgactacccgaactacatggcgaacaccgagtcgttccgcgccaaggcacgctcccagagcgcgccgaagcagaggccgcagtacgagaagtccagctccctccggaaggcgtcggcgcacgcgttcggacccggatcgtgcgcgccggtggcacagaggacaacggcctccttgcatagcaagttcaccaacaaggcctaccctggatcgggcaggttggatcggctaggcatgcccgtcaagtactga</cdnaseq>

Protein Sequence

<aaseq>MGWASRWLRGLLGGGKKPNSGSGDPKPAREKKRWGFGKSFREKS PAHPPPPPPPSAAVQRAVTPRRAYTASDEGDDEQSKRAIAVAAATAAVAEAAVAAAQA AAAVVRLTSSGRCAPAAAKREEYAAVRIQAAFRGYLARRALKALRGLVKLQALVRGNI VRRQAAETLRCMHALVRVQRRARACRAIRSQHVSAHPGPPTPEKYDQATHEGVPKHGR SGSLKGSSSKTPGSERLTRERSESCGRNWLDKWVEERYLDDEKNAKILEVDTGKPGRH ASRRRSGSHHHHSSCSSMTSEQKSRSYATMPESPSKDSTTAQQSVPSPPSVGMAEALS PLLMAVDIAELCDSPQFFSATSRPGSSRSRAFTPTKSECSRSLFGGYSDYPNYMANTE SFRAKARSQSAPKQRPQYEKSSSLRKASAHAFGPGSCAPVAQRTTASLHSKFTNKAYP GSGRLDRLGMPVKY</aaseq>

Gene Sequence

<dnaseqindica>1588..2313#1423..1500#1099..1275#169..582#ggctcttcctctccgaccttgctccgcttcttcttttctcggtgtaagcgtgcgcgcgtttcactgtttcggtttcatctcccgctcttccattttgccgctccggcgaagtgctggaagcggagccgaggttaagccatgggaacggccgagctgaaggcctaggagatggggtgggcgtccaggtggctgcgcgggctgctcggcggcggcaagaagcccaactccggctccggcgacccgaagccggcgagggagaagaagcgctgggggttcgggaagtcgttccgtgagaagtccccggcccatccgccgccgccgccaccgccgtcggcggcggtgcagagggcggtgacgccacggcgggcgtacacggcgtcggatgagggggacgacgagcagagcaagcgggccattgcggtggcggcggcgacggcggcggtggccgaggctgccgtcgccgctgcccaggcggccgcagccgtggtgcggctgacgagcagcggacgatgcgcgccggccgccgccaagcgggaggagtatgcggctgttcggatccaggccgcgttccgcggctacctggtaaagcttctcatctcgactcgtcagttcctaatcttttctgataacttcacgttttagaattaagttggtggaaactccacttttaattttaaagccaaaaaaggagaacactttcttccaaaaatctcatctttctttttcgcttcgccaaaagaaatttccggtagcaaatgtactcttgtgaggaaaaaacacgccgtggtgtcatctccagccaagagaagcctctttgtgcttctgctctgccattcctgcgtctttactgccccttagtccctagacttcttttatccaagcaaggcatgggctccggcgctttaactccattttgcacatcaagaacactgccgtttgcattttgttaccaccgagttactgttcttggaagcagctctagtaatggcggtggtggttggcatgtcaacctccggcctgcggtgcatgctcccgttgttaccgggggtcccctgctgattaacctctctgattgtcgttgcgcgcgtgcgtacgtaggcgagacgggcactgaaggcgttgcgagggttggtgaagctgcaggccctcgtccgcggcaacatcgtgcggcggcaggcggcggagacgctccggtgcatgcacgctctcgtccgagtccagaggcgggcgcgcgcgtgtcgcgctatccgctcccagcatgtctcggcccatcccgtaagtaaaaattctgtatgattcctgtattttcacctgtagatacttcagattaaaaaaaatgttatgtcacaattctgtatttttcaattttaatgtcgttgacgtcttctcatgatggttcttggtggtggttgggcattgcaggggccaccgacgccggagaagtacgaccaggcgactcacgagggcgtgcctaagcacggccgttctggttctctgaaggtattgctccgtttgtttgttcagatttttatgtgtagtacattgcgacagccttggagattaatggcatggcgatttgtgttgcaggggagctcgtcgaagacgccgggaagtgagagactgacccgggagaggtcagaatcttgcgggaggaactggcttgacaagtgggtggaggaacggtatttggatgacgagaagaacgccaagattctcgaggtggacaccggcaagcctgggcggcacgcctcacggaggcgcagcggcagccatcaccaccactcgtcatgctcgtccatgacatccgagcagaagagccggagctacgcgaccatgccggagtctccgtccaaggactccacgaccgcgcagcagtccgtgcccagcccgccgtcggtgggcatggccgaggcgctcagcccgctgctcatggccgtcgacatcgccgagctctgcgacagcccgcagttcttctcggcgacgtcgcggccggggagctcgcggagcagggcgttcacgccgaccaagagcgagtgctcgcgcagcctgttcggcggctactccgactacccgaactacatggcgaacaccgagtcgttccgcgccaaggcacgctcccagagcgcgccgaagcagaggccgcagtacgagaagtccagctccctccggaaggcgtcggcgcacgcgttcggacccggatcgtgcgcgccggtggcacagaggacaacggcctccttgcatagcaagttcaccaacaaggcctaccctggatcgggcaggttggatcggctaggcatgcccgtcaagtactgatcatatgccggattctcgcgatcaaccgggacaagtgaatgaaagcgacaagtgtgtcaaactgtgtttagcaaggaccgagtgaatttagcaattggtcgttgttaggcttgagctttttatgggtgctgttaccgtcacagattttctttcttgtttttaactagttatgaagtgtaagttgctggtagctgtttggtgaagtatctatgcgtccttaaccttcctgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0569900, RefSeq:Os04g0569900