Os04g0570000

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0570000| Description = Cytochrome P450 family protein| Version = NM_001060134.1 GI:115459997 GeneID:4336709| Length = 4479 bp| Definition ...")
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Gene Name

Os04g0570000

Description

Cytochrome P450 family protein

Version

NM_001060134.1 GI:115459997 GeneID:4336709

Length

4479 bp

Definition

Oryza sativa Japonica Group Os04g0570000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29071241..29075719

Sequence Coding Region

29071774..29071864,29071951..29072081,29073059..29073165,29073270..29073348,29073805..29073894
,29074041..29074292,29074594..29074746,29074858..29075182,29075296..29075612

Expression

GEO Profiles:Os04g0570000

Genome Context

<gbrowseImage1> name=NC_008397:29071241..29075719 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29071241..29075719 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagccatatcttcagctagcttctctccgcctcgccaccaccatccctctcgccccaagattatacgacgcgaaccttctcgccgcctccggggcggccatggcttcttccatggcctatatagcgctcctgtgcgcggcattggcagccgtcgtcgcgctcctccgctgggcgtacaggtggagccaccccaggtcgaacggcaggctgccgccgggctcgctcggcctccccgtcatcggcgagacgctgcagttcttcgcgcccaacccgacctgcgacctctcccccttcgtcaaggagaggatcaagagatacgggagcatcttcaagacaagcgtggtggggcggccggtggtggtgtcggccgacccggagatgaactactacgtgttccagcaggaggggaagctgttcgagagctggtacccggacaccttcaccgagatcttcggccgcgacaacgtcggctccctgcacggcttcatgtacaagtacctcaagacgctcgtgctccggctctacggccaggagaacctcaagtccgtgctcctcgccgagacggacgccgcctgccgcggcagcctcgcctcctgggcctcccagcccagcgtcgagctcaaggaaggcatctccactatgatatttgatctcacagccaagaagctgatcggctacgacccgtccaagccgtcgcaggtgaacctgaggaagaacttcggcgcgttcatttgcgggttgatatccttcccactgaacatccctggcacggcctatcacgagtgcatggaggggaggaagaacgcgatgaaggtgctgaggggcatgatgaaggagaggatggccgaaccggagcggccatgcgaggacttcttcgaccacgtgatccaggagctgaggagggagaagccgctgctgacggagaccatcgcgctggacctcatgttcgtcctcctcttcgccagcttcgagaccaccgcgctggcgctcaccatcggcgtcaagctcctcaccgagaatcccaaagtcgtcgacgcactaagggaggagcacgaggcaatcatcaggaacaggaaggaccccaattccggcgtcacgtgggccgagtacaaatcgatgacgttcacgtctcaggtcataatggagattgtaagactcgcaaacatcgtgccgggaatttttcggaaggcgttgcaggatgttgagatcaaaggctacacaattccagcaggatggggtatcatggtgtgcccaccggcagtgcacttaaaccctgagatatatgaagatccgttggccttcaatccatggaggtggcagggaaaaccagagatcactggaggaacgaagcatttcatggccttcggtggtgggcttcggttctgcgttggaactgatctcagcaaggttttgatggcaacattcatacactctttagttacaaaatacagttggaggacagtgaaaggaggaaacatagtccgaacccccggtctcagctttccagatggttttcatatccagctcttccctaagaactga</cdnaseq>

Protein Sequence

<aaseq>MQPYLQLASLRLATTIPLAPRLYDANLLAASGAAMASSMAYIAL LCAALAAVVALLRWAYRWSHPRSNGRLPPGSLGLPVIGETLQFFAPNPTCDLSPFVKE RIKRYGSIFKTSVVGRPVVVSADPEMNYYVFQQEGKLFESWYPDTFTEIFGRDNVGSL HGFMYKYLKTLVLRLYGQENLKSVLLAETDAACRGSLASWASQPSVELKEGISTMIFD LTAKKLIGYDPSKPSQVNLRKNFGAFICGLISFPLNIPGTAYHECMEGRKNAMKVLRG MMKERMAEPERPCEDFFDHVIQELRREKPLLTETIALDLMFVLLFASFETTALALTIG VKLLTENPKVVDALREEHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVP GIFRKALQDVEIKGYTIPAGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGT KHFMAFGGGLRFCVGTDLSKVLMATFIHSLVTKYSWRTVKGGNIVRTPGLSFPDGFHI QLFPKN</aaseq>

Gene Sequence

<dnaseqindica>3856..3946#3639..3769#2555..2661#2372..2450#1826..1915#1428..1679#974..1126#538..862#108..424#aaacccacagataacccctccgcctcctcccctttggcctttgctagcaactctagctagcattagcaaaccacctctcctctcgcacaactctcccccatacgcacatgcagccatatcttcagctagcttctctccgcctcgccaccaccatccctctcgccccaagattatacgacgcgaaccttctcgccgcctccggggcggccatggcttcttccatggcctatatagcgctcctgtgcgcggcattggcagccgtcgtcgcgctcctccgctgggcgtacaggtggagccaccccaggtcgaacggcaggctgccgccgggctcgctcggcctccccgtcatcggcgagacgctgcagttcttcgcgcccaacccgacctgcgacctctcccccttcgtcaaggagaggatcaagaggtacacacctccacctcagaaccaagaacgcatgcggcaatggcgtgcggaagtattgacgttgttgatcgatcgagttcggtccgtgacattggcgttggcgttgggcgcagatacgggagcatcttcaagacaagcgtggtggggcggccggtggtggtgtcggccgacccggagatgaactactacgtgttccagcaggaggggaagctgttcgagagctggtacccggacaccttcaccgagatcttcggccgcgacaacgtcggctccctgcacggcttcatgtacaagtacctcaagacgctcgtgctccggctctacggccaggagaacctcaagtccgtgctcctcgccgagacggacgccgcctgccgcggcagcctcgcctcctgggcctcccagcccagcgtcgagctcaaggaaggcatctccactgtaagcacacaccggacgccaaatcaaccagcatgcatcagcatgtgctagctgcctagctagccgcattgcgcgtaattgacgaggattaattctgtatatatatttcagatgatatttgatctcacagccaagaagctgatcggctacgacccgtccaagccgtcgcaggtgaacctgaggaagaacttcggcgcgttcatttgcgggttgatatccttcccactgaacatccctggcacggcctatcacgagtgcatggaggtacggcgcccacacgcccgcagccgcccgcaactcggcaactgcccccatactcttgaacacgatataatttgtacaacttcaaattgcaccctagctaggccgtctgcacatgcgaaacgccactaaactaaggaccacacgcacagacagatcggtgtacttggccgtatagccgcgcacatgcactccataaacctcagaaactcctgcttctcactgttacacagctagctgatatatactcaaaaaaaatgaattccgattttaaatttgtttttttgaattgatacgtacacaggggaggaagaacgcgatgaaggtgctgaggggcatgatgaaggagaggatggccgaaccggagcggccatgcgaggacttcttcgaccacgtgatccaggagctgaggagggagaagccgctgctgacggagaccatcgcgctggacctcatgttcgtcctcctcttcgccagcttcgagaccaccgcgctggcgctcaccatcggcgtcaagctcctcaccgagaatcccaaagtcgtcgacgcactaagggttagtctactctctactctcgctgttgatcatatttcactcaacgggagtgtgatgagttcaactagctcgtcattgatcagatcaatcgatcgacaagttaaagcaaagtagaattaaaccttgtcgatcgcgtgggcatgcaggaggagcacgaggcaatcatcaggaacaggaaggaccccaattccggcgtcacgtgggccgagtacaaatcgatgacgttcacgtctcaggtgagcctaacccgggactagtgtgcgctagaccaatctgcactgctacgtactgtaatacccccgctcgaatttacttggggaacaatgagattgatctggaactagtgcaagaatcttgggagcccaaagctgttgccaacaagactgcaactctgcaagtgcagagttcgtgttcccctgttgtttaaccaaggcccaatcttcaagaatgatagataatcttagttaataataactgtaagaactttcttgaacaggcttggctgattaagaaaaactcctatttttacaattgaaaatagcaaaagaggaagagaatcagaactcggcaacctgaatttttaccgcagttaattgttttggcaactgcaggttatgtagtagatgccatttccgtacgatttctgaatccataactgccaaaactaacgcttccatgttctttatgtgaaggtcataatggagattgtaagactcgcaaacatcgtgccgggaatttttcggaaggcgttgcaggatgttgagatcaaaggtacacatatctcgaatactatctagcacatgacatctcttgttaattagaaaggttcacttcagcaagttgcagcacaaaactgaactctgaactttgtgcaggctacacaattccagcaggatggggtatcatggtgtgcccaccggcagtgcacttaaaccctgagatatatgaagatccgttggccttcaatccatggaggtggcaggttagtcttcttaatatgaactttcagtaattagcagtttctgcatgtacattctaagtttacacgtaggttagggttccatcttgccaggttgagcggcagctccagccttgagctttggtccttcagtttattttaggcgtctaccttttttattaaaaaaaaaagagctctctcctcatctaggaagtaggaactgtaattatctgatctgctcaccgaacttgcatatattctcctctcaagcctcgacattaaaacggaaattatgaaagaagaatactttaattaactgcaacttcccaattattagcactgtgattagtataaggttgcaaggttctgatctcaagtaccagcttgatcggtcaggggtttaataccagaaccaacagagaaacttcctgctcagtagtttaacaacaaggtcaaatgccaagagaagtacagtgtaacctatgaaaaaacaagtaccatgaagctatctcatctgtcaagtactacttaagtgcacagaaaattgttagctatcattggggcttgtggtaataaatttgtaatccgacagtatctcaatccggtaggtgaaccatgtgctatttcaccagtcccttgtaaaacaaaaaggatgataaattgcataaagagcaatgcaatctgtaaaaaggcaagctgtcttgcctgtctatgacatggatctatagatgcagtaacaagctgatttcaggttcagtgagctctcctaggtgattgggtataaagaaataaacaaagtgagaaccaagagtttcaataaacaagtgtttccattaccctataaaaaaagcaactgtttgcattgaagttgtggaaaatgagtaatgggtagcataacgaggaaagggagagaatgggagcatcacatgcattttccacattagtaaggaatatctgcattgaaataatatatggctctaaactagcccttgtctgaacagggaaaaccagagatcactggaggaacgaagcatttcatggccttcggtggtgggcttcggttctgcgttggaactgatctcagcaaggttttgatggcaacattcatacactctttagttacaaaatacaggtaccatttctcaacctaaatataacattctcacgttggctcatcctgtggacatcatctgaataaccatttttttctcatggcagttggaggacagtgaaaggaggaaacatagtccgaacccccggtctcagctttccagatggttttcatatccagctcttccctaagaactgatcgtttttttacctcggcggtttggtttttgccactaaacacaaaaatgtgtgtgcaaagatgtcgttgggtttttatcctacgtcgataattggtgatagagagcacaacttaaaagatggagtggtcatcactcacttggtcaacctctcgggttgtgtagacccgtcgaccttaagttgtggcttcgactagacctgatagactggatccaagatgcgtttgggggctgtaacaagtggccagtctgaatgaaccgatgtatgatgggagagattgttgtgggggagcataacttaggctagttttaggttatttaaggacaacagaaaaggatggaaacacatacttagtctagtgatagaatagacacatctcagatagaagtaatgtcatgttaccgagtgctacctctagtccgtgaaaaggggtttttgtaccttggtagttcgtttttcatgtggttagtcaagtcaactatccatgtgttgtactccgtatataaatcaacctatacatgtctaatgaagcaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0570000, RefSeq:Os04g0570000