Os04g0570800

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0570800| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001060138.1 GI:115460005 ...")
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Gene Name

Os04g0570800

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001060138.1 GI:115460005 GeneID:4336714

Length

4997 bp

Definition

Oryza sativa Japonica Group Os04g0570800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29120990..29125986

Sequence Coding Region

29122689..29122911,29123121..29123198,29123330..29123722,29123817..29124120,29124205..29124415
,29125170..29125901

Expression

GEO Profiles:Os04g0570800

Genome Context

<gbrowseImage1> name=NC_008397:29120990..29125986 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29120990..29125986 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgggcgcgaccgccacgaagctgcacatgccgtccgcgggcggccgccgcccgtccctgttccacctcgcggccgtcgcggtgctctgcacggtgtcctacctcatcggcatctggcaccacggcggcttctccgcctccccggccggcggcgtcgcctcctccgtctccatcgccaccaccgcctccgtctcctgcgtctcccccaccccgacgctccttggcggcggcggcggcggcggcgactcctcgtcgtccgcgccgctcgacttcgcggcgcaccataccgcggaggggatggaggtggcgtcgggccaggtgcaccgcacgtacgaggcgtgcccggccaagtactccgagtacacgccgtgcgaggacgtcgagcgctcgctgcggttcccgcgggaccggctcgtgtaccgggagcggcactgcccgtcggagggcgagcggctccggtgcctcgtgccggcgccccaggggtaccgcaacccgttcccgtggccgaccagccgcgacgtcgcgtggttcgccaacgtgccgcacaaggagctcaccgtcgagaaggcggtgcagaactggatccgcgtcgaaggcgaaaagttccggttccccggcggcggcaccatgttcccccacggcgccggcgcgtacatcgacgacatcggcaagatcatccccctccacgatggatccatccgcaccgccctcgacaccggttgtggggtagcgagctggggcgcatacttgctgtcacgcaacatcctggccatgtccttcgcgccacgtgactctcacgaggcacaggttcaatttgcactggaacgtggtgtgccggcgatgatcggtgttctttcatccaaccggctcacctatccagctcgtgcctttgacatggcacattgctcccgctgcctcattccctggcagctctacgatgggctgtacttggctgaggtggatcgcattctgcggccaggagggtattggattttgtctggacctccaatcaactggaagaagcactggaaggggtggcagagaaccaaggaggacctgaatgcagagcagcaagcgattgaggcagtggccaagagtctttgctggaagaagatcacgctcaaggaggttggtgacattgccatctggcagaaacctactaaccacattcactgcaaggcctcccgcaaagtcgtcaagtccccacccttctgctcaaataaaaatccagatgctgcatggtacgataagatggaggcttgcataactcctctcccagaggttagtgacataaaagagattgcgggtggccagttgaagaaatggccagagaggctcactgcagtgccacccagaattgccagtggtagcattgagggtgtcactgatgaaatgttcgtggaagacaccaaactatggcagaagagggtcgggcactacaagtccgtgataagtcaatttggacagaaaggacggtaccgcaacttgcttgatatgaatgcgcgctttggcggcttcgctgcggcattggtggatgaccctgtgtgggtcatgaatatggtcccaactgttggcaattcaacaactcttggggttatatacgagcgtgggctcatcggaagctaccaagactggtgtgagggcatgtccacgtaccctcggacctacgacctcattcatgccgattcagtgttcacgctatacaaggacagatgccagatggacaacattctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgttgatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgttgatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactggacactcggggaagaaaaggaatag</cdnaseq>

Protein Sequence

<aaseq>MAVGATATKLHMPSAGGRRPSLFHLAAVAVLCTVSYLIGIWHHG GFSASPAGGVASSVSIATTASVSCVSPTPTLLGGGGGGGDSSSSAPLDFAAHHTAEGM EVASGQVHRTYEACPAKYSEYTPCEDVERSLRFPRDRLVYRERHCPSEGERLRCLVPA PQGYRNPFPWPTSRDVAWFANVPHKELTVEKAVQNWIRVEGEKFRFPGGGTMFPHGAG AYIDDIGKIIPLHDGSIRTALDTGCGVASWGAYLLSRNILAMSFAPRDSHEAQVQFAL ERGVPAMIGVLSSNRLTYPARAFDMAHCSRCLIPWQLYDGLYLAEVDRILRPGGYWIL SGPPINWKKHWKGWQRTKEDLNAEQQAIEAVAKSLCWKKITLKEVGDIAIWQKPTNHI HCKASRKVVKSPPFCSNKNPDAAWYDKMEACITPLPEVSDIKEIAGGQLKKWPERLTA VPPRIASGSIEGVTDEMFVEDTKLWQKRVGHYKSVISQFGQKGRYRNLLDMNARFGGF AAALVDDPVWVMNMVPTVGNSTTLGVIYERGLIGSYQDWCEGMSTYPRTYDLIHADSV FTLYKDRCQMDNILLEMDRILRPEGTVIIRDDVDMLVKIKSITDGMRWNSQIVDHEDG PLVREKLLLVVKTYWTLGEEKE</aaseq>

Gene Sequence

<dnaseqindica>3076..3298#2789..2866#2265..2657#1867..2170#1572..1782#86..817#agaaaggcgaatcgccccaatcccacaagaggcgaggggagagaggagagcgcgcagcgggagcagcagaagccgccagccagccatggcggtgggcgcgaccgccacgaagctgcacatgccgtccgcgggcggccgccgcccgtccctgttccacctcgcggccgtcgcggtgctctgcacggtgtcctacctcatcggcatctggcaccacggcggcttctccgcctccccggccggcggcgtcgcctcctccgtctccatcgccaccaccgcctccgtctcctgcgtctcccccaccccgacgctccttggcggcggcggcggcggcggcgactcctcgtcgtccgcgccgctcgacttcgcggcgcaccataccgcggaggggatggaggtggcgtcgggccaggtgcaccgcacgtacgaggcgtgcccggccaagtactccgagtacacgccgtgcgaggacgtcgagcgctcgctgcggttcccgcgggaccggctcgtgtaccgggagcggcactgcccgtcggagggcgagcggctccggtgcctcgtgccggcgccccaggggtaccgcaacccgttcccgtggccgaccagccgcgacgtcgcgtggttcgccaacgtgccgcacaaggagctcaccgtcgagaaggcggtgcagaactggatccgcgtcgaaggcgaaaagttccggttccccggcggcggcaccatgttcccccacggcgccggcgcgtacatcgacgacatcggcaagatcatccccctccacgatggatccatccgcaccgccctcgacaccggttgtggggtaggccacttcatacataagcacaccctatttgcttaagatagatgacattcgcgcataattagctcgattttaagtagtgtttcgtacattcgtagcaaaatttgggggtttagttatactccagtttgttgatgcactagaacatgaggcggaaatctcggcaacgccggaatgggattttgctttgcgcgtgtcggaagtttccagtcccacactgctcctctgggcccttctgcccgggcaaacgggtctgaccctaaacgagcttctgctccgacccggatcagaggagcatttgttcgtttcattctgtgattaggcaggtcagactgtagagtaacgtgaccaatccgacataccgtttcgtttagaggctgaactgaagcactgaactgaagttactagtacttgactgcttgtagcattccgtgcgcatagtgcattctttgatcaaattctccatgtcggctgcggataggagaggttctgttgtgtgcactgtgcactaatatcgttgaaaacttggaagatatgtagtgcctttttacacagtgacaatgtcacacataatggaattttcacgtctacagcaagctgtgccaatagttgtcattttgatctatttgtattgctagatatgtggaaactgagtttttctcatgtgtagaggggcaagttaccctttgtatattataaccagacgcctagagttatggattcctaatgtgttgcactctgccgcttgttgcaggtagcgagctggggcgcatacttgctgtcacgcaacatcctggccatgtccttcgcgccacgtgactctcacgaggcacaggttcaatttgcactggaacgtggtgtgccggcgatgatcggtgttctttcatccaaccggctcacctatccagctcgtgcctttgacatggcacattgctcccgctgcctcattccctggcagctctacggtatggcaacattttgtccaaaattaaatgtgttggcaatgctctgttaatcctttgataactcaggtgcaatttgaaatgcagatgggctgtacttggctgaggtggatcgcattctgcggccaggagggtattggattttgtctggacctccaatcaactggaagaagcactggaaggggtggcagagaaccaaggaggacctgaatgcagagcagcaagcgattgaggcagtggccaagagtctttgctggaagaagatcacgctcaaggaggttggtgacattgccatctggcagaaacctactaaccacattcactgcaaggcctcccgcaaagtcgtcaagtccccacccttctgctcaaataaaaatccagatgctgcatggtaattacaacactaattatatctttattgtccatcttgaagttaactcacgttcacagttcaggataaatcatattcatgtgatcgattataggtacgataagatggaggcttgcataactcctctcccagaggttagtgacataaaagagattgcgggtggccagttgaagaaatggccagagaggctcactgcagtgccacccagaattgccagtggtagcattgagggtgtcactgatgaaatgttcgtggaagacaccaaactatggcagaagagggtcgggcactacaagtccgtgataagtcaatttggacagaaaggacggtaccgcaacttgcttgatatgaatgcgcgctttggcggcttcgctgcggcattggtggatgaccctgtgtgggtcatgaatatggtcccaactgttggcaattcaacaactcttggggttatatacgagcgtgggctcatcggaagctaccaagactggtgagttcttgtaccgcaactctgcaagcactgcccctctctttgagactgaatatgatgacggtcatgttttgttggtgtgtgtgctcatgtttttgttggtgtgtgacttctatccgtgcttactgcaggtgtgagggcatgtccacgtaccctcggacctacgacctcattcatgccgattcagtgttcacgctatacaaggacaggtaatcataagctgcagtaaaattcagtccatcacagcaacagtgacttctgttcttgtccgtggagtataaatctgtactcctatgcagtagtaactgcacattattctttatgcctgtatttgagaaatctaataggtatcgttaacagtcactcttggagactgtttaccctggtactggactgacgcagttttcgtctcttgcagatgccagatggacaacattctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgttgatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgttgatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactggacactcggggaagaaaaggaatagcaataacgtgaaataaagtgttagaaaaaattgacatattgggcaaatatcgtaatcggcttaccatttgccttgtggatttgaagtttctttttccatttcattctttgggtggaatagttcacatatggagttcagccctcgatgtttaggtgtaaaagaggtgctgagaaggaaaccctgcaaagttttttacattaaaggacaaccaaagtattccaggtgggtaaatagaagctacaattatggtgtcaatcctttttgttccaatgcacggtgtttgccattactttttactagtagattaccattctgatataattcttacattactcgtaggtctggtttctacggtcagtagcattcttcatgcgctgtcatcaggcattttagtacggagtaccagtgtaccaccatagtacgcctactctccctagaacagtagaactaccgtggaatgtttacatggctagacgcaaattgtctgaactgcctttacgtttgctcgcacatgctactggagtgctgaactcaactactatgcctgtgaggtttgactctggattcagctgaaaatttggtggcccacactgagcgtaccatatgcattcgtctacactaactccaggtgaataatgtcaaaattacaaaattagttacagtgtagctgaacattaggcacgctagcaccgactgcaatgccttaaaatgagacaaaacggttgtactggtatattccgcgtctacacgccttcgttgttttgtgccgacgtcagcgtcggtgctggaattggaagtggtagtggaagacaagccacgcaaaacatccaaaaatctgacacagagtcagccaagttgagaaaagggcctaaagacttttaagtcctaaccacttcaatcagcatctggaatatatttgcataattattgacaccattttgtcactgtcatgccataattttcatgtattacttataacgagtaccatttttttttaaaaaaaacatcgtgaatgtctctgaattttgcccttaaaagtaaatctcagtatatctagcatataagtagtttgctagtagcaaactacttatatgctagatatactgagatttacttttaagggcaaaattctccctgtattatggagaagataacgttagctgtctagtttcagatcttgcaagtaatggactaacggctaattaaagagttcatcaccattggcatgcatgcaatgcgacggcaacagaacgcactggtccccgacaggaggagcagaagaaacaattcacttttgggcgatcggtgcatgtattgaaatgatgaggacacttgacagaccacgaggtccccctgtcacaaggattcatctgagatatcccccattatccaccggaagaacagtgatgcataccaccttacagctaaccaaagtgtcaatctcacctaacgctgcaataacagagctcttaacagtggcatctctgtatacaataggagggctactggttactggttagctcgcaacagtggttacttgttagctgttgagctagcaatggcaatcagtctatataggatgctagtggtagtggttaagaatcttctgtcaaggacatgcacggagaaaaaataattgacatttagtttgtggtaatgccataggccagagcaaataatacagtaaattttcatgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0570800, RefSeq:Os04g0570800