Os04g0571800

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0571800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001060142.1 GI:115460013 GeneID:4336719| Length = 267...")
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Gene Name

Os04g0571800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001060142.1 GI:115460013 GeneID:4336719

Length

2676 bp

Definition

Oryza sativa Japonica Group Os04g0571800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29187026..29189701

Sequence Coding Region

29187376..29187561,29188445..29188542,29189077..29189401

Expression

GEO Profiles:Os04g0571800

Genome Context

<gbrowseImage1> name=NC_008397:29187026..29189701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29187026..29189701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggggtcgggcctgaatctcgtcagcgcggcgctcggcttcggcatgaccgccgcctttgtcgcgttcgtctgcgcgcggttcgtctgctgccgcgcccgccgcgcggacgctagcgcgtcacggccacacccctcgccggtggacttcgacgcggacttcccctcggatttcgatcgcccgatagagcattcccgcagtgggttggaaccattggctgttgctgcaattcctacaatgaagtataactgtgaagctttccattcggaagatgacacccagtgctccatatgtttaagtgaatacaaggagaaggacattctaagaattgtacctatttgtcatcataactttcacctttactgcttagatgcatggttgctgaagcagactacttgcccaatatgccggatctcattgaaagaactgcctgatggaaaatcgaccgtatcctctgctcctaccatgtctcaaccccccaccctccctgagagttctgttaatccaacatctcatttcctcccagttcatcaagaacacagaagccaccaggatggcccagatatgccagaatctgtagaggtggttattgaaatccgacagtga</cdnaseq>

Protein Sequence

<aaseq>MLGSGLNLVSAALGFGMTAAFVAFVCARFVCCRARRADASASRP HPSPVDFDADFPSDFDRPIEHSRSGLEPLAVAAIPTMKYNCEAFHSEDDTQCSICLSE YKEKDILRIVPICHHNFHLYCLDAWLLKQTTCPICRISLKELPDGKSTVSSAPTMSQP PTLPESSVNPTSHFLPVHQEHRSHQDGPDMPESVEVVIEIRQ</aaseq>

Gene Sequence

<dnaseqindica>351..536#1420..1517#2052..2376#gtgaaaaaatggcgaccaaagtgcacgcccgccgcctctagcgccgaccgcctcccgttccccttccccactccgtcccggcagctacctccgctttccaccacgccggccgatccgcctccccaaccctatcgccggcaggcgcgccacgccaggttccgggctcggagacaccgcacgctccgcccgatgggcacccccgggccggagctcgccgctctcgcgattcgccgcagcggcggccgcctgttcgagcggtagggagggactcgtctccccgcctctccttgtcgtggactcgtggtagcgggggtgggaggagccagagaggctgggggcagggagggaggatgctggggtcgggcctgaatctcgtcagcgcggcgctcggcttcggcatgaccgccgcctttgtcgcgttcgtctgcgcgcggttcgtctgctgccgcgcccgccgcgcggacgctagcgcgtcacggccacacccctcgccggtggacttcgacgcggacttcccctcggatttcgatcgcccggtatgtggcaccttgttctccctcaataatagtcttccgctgcgattttagtccacaaactggagtagtaatttgctcgtgttaacggtatcactgctacctgcagtggcatggcacgtgcacaaaacgactggagtatatctgttttcattttctgtgttcatggacagtacttttctactttcaagcagaaatacttgtcatgtgtcatgctcaatttatgatggccttactgtgtagtaaatcaaatggggaataagtacaggcactagtagtacactagcctgctttaccttgggcgtgcaatgttgttaaagtggctttggattgcttactggggttccttaagagattcattaagaatttgagatgttaccgtctaatctttttaatcattttaatattgtttatggttttatgttccctgtacaaataacaattttatttaagcgactaaaggaggaaggcacatcaacacatgtatgctagacttgtttctgaatttctcttctttgttggtttaaattgggttattctctcttttaaaatgaaaaatgtgttagtcttttggatcatttcctatatatacaaaataagctgaaaaatatcaattcaataataatagtataatgtattttcactgaagttcgtatagcgccaactgcacaaagcatctttctttcagagttagtggtcttgtagtagttcctcttagctagtactactacatataaaacagtgcattgaatctatagtactatgttgagcgtttgagctcatatggaaattattagtgaatagatcaactgaatcaatagtcaacacgccctataaattcattttggacttgaaagtaaatgcaagatttttttttattgttcagatagagcattcccgcagtgggttggaaccattggctgttgctgcaattcctacaatgaagtataactgtgaagctttccattcggaagatgacacccagtaagtacaatcgtcaccatctgaagtaaatattattgaacttctttatagtgtggttcaatgcatataatctgcttctaacatgctattgttagaaaaactatggttattgaaaaatattagcacaatgagttaaaaggtttgttagactttgtggaattcatatccttgtggaaatgttggaatttagatgtgcttaatcgaagcatatttaatcaatatgtacaatgggtagagatattatagattatcaatcatacttcttgttgatgagataacataggacaacacacctgtagcttttatcagtttttttgcagtaccttgggccttcgccaccagtccagatttaataggaaccaatttggcagagttgagtcttatctcattacgttgtcaacctgggttcagtttagtcttacttcaagtaaactttctatcattatcatctctgcttgcagccatacctcttaaatttatgatgcatccataattttttttttttgtaatatataggatgttttgttgtaacaggtgctccatatgtttaagtgaatacaaggagaaggacattctaagaattgtacctatttgtcatcataactttcacctttactgcttagatgcatggttgctgaagcagactacttgcccaatatgccggatctcattgaaagaactgcctgatggaaaatcgaccgtatcctctgctcctaccatgtctcaaccccccaccctccctgagagttctgttaatccaacatctcatttcctcccagttcatcaagaacacagaagccaccaggatggcccagatatgccagaatctgtagaggtggttattgaaatccgacagtgactacggcggaatagtgcaagacaagaatttgcagtttaaattctttgtacgcccttcattgcattgtttgtcgcagtttcaaaatgtttgaagtcaaaattatatgtggtccctttgcaagttgtagactagagaagtcagtcatacaatccacattatcatatgttctttttaatatatgttgtatattgcaagctaagtaaaaataccgataagatctactgatataggagtagagcttatttactgttgagtccctaatttttttatgagtgaatttcagcagggacacctcttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0571800, RefSeq:Os04g0571800