Os04g0573100

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0573100| Description = Similar to Mandelonitrile lyase-like protein| Version = NM_001060147.1 GI:115460023 GeneID:4336725| Length = 2418 bp...")
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Gene Name

Os04g0573100

Description

Similar to Mandelonitrile lyase-like protein

Version

NM_001060147.1 GI:115460023 GeneID:4336725

Length

2418 bp

Definition

Oryza sativa Japonica Group Os04g0573100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29268809..29271226

Sequence Coding Region

29268881..29269613,29269713..29270122,29270222..29270787,29270964..29271030

Expression

GEO Profiles:Os04g0573100

Genome Context

<gbrowseImage1> name=NC_008397:29268809..29271226 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29268809..29271226 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccgacatggacaccacacgagcgctggccatcttagcggccacaagctttgttgcaatgctagcatgtgtacaggcggcaggagacgagagctacacgttcatgaaggacgcggtgcagtccccgcaggtgtcgtactacgactacatcatcgtgggcggcggcacggccgggtgcccgctcgcggcgacgctgtcgcagcgcttccgcgtgctcctgcttgagcgcggcggctcgccgtacgacgacgagcggatcgggaacatgacacgcttcgcggacacgctgtccgacacgtccccctcgtcgcccgcgcagcggttcgtgtccgaggacggcgtgatcaactcgcgcccgcgggtgctgggcggcggcagctgcatcaacgccgggttctacacgcgcgccagcgacgagtacgtgcgtggactcgggtgggacctcgaggcgaccacggcggcgtaccggtgggtggaggacgtggtggcgttccagccggagctgggtccctggcagtcggcgctggagagagggttgctggaggccgggatcgcgccgcagaacggcttcacgttcgaccacctcggcgggacgaaggtcggcggctcgatcttcgacgccgaggggcggcgccacacggccgccgacctgctccggtacgcccgcaccgacggcatcgacgtgctgctccgagccagagtggccaagatcctgttcaacgtcagagctggaagacggccagtggcgcacggggtggtgttccacgattccgaggggcagatgcacagggcttacctcagcaacggccgtggcaacgagatcatcctctcggcgggcgccatgggcagcccgcagttgctgatgctcagcggcgtcggccccgccgaccacctccgctcgttcggcatcacgctcgtcctcaaccagccggccgtcggccagggcatgtccgacaaccccatgaacgccatctacgtgccgtcgccttccccggtcgaggtgtcgctcatccaggtggtcggcatcactgaggtcgggagctacatcgagggcgccagcggcgccaactggggcgtccggcgctccggctccggcggcgacagaccgcaccgcaacttcggcatgttctctccacagacggggcagctggccacggtgccaccgaagcagcggacgccggaggccatcgcgcgcgcggcggaggcgatgagccagctcgacgacacggcgttccgcggcggcttcatcctggagaagatcctcggcccgctgtccacgggccacctcgagctgcgcaaccgcaaccccgacgacaacccgtcggtgacgttcaactacttcgcgcacccggaggacctccggcgctgcgtggccggcgtgtcggtgatcgagcgcgtcatcaggtccgaggccttcgccaacttcacgtacccgtacttctccgtcgagacgctgctcaatatgacggcggggttccccgtcaacctccggccacggcacgacaacgactccacgtcgctggagcaattctgcaaggacaccgtcatgaccatctggcactaccacggcggctgccaggtgaacagggtcgtcgacgccgagtaccgcgtgatcggcgtcgacgcgctgcgcgtcatcgacggctccacgttcaacgcctcgccgggaaccaatccgcaggccactgtcatgatgctcggcaggtacatgggagtcaaaatccaaaacgagaggttgggaaatgaaggattaggaaggagaaatctgtaa</cdnaseq>

Protein Sequence

<aaseq>MASDMDTTRALAILAATSFVAMLACVQAAGDESYTFMKDAVQSP QVSYYDYIIVGGGTAGCPLAATLSQRFRVLLLERGGSPYDDERIGNMTRFADTLSDTS PSSPAQRFVSEDGVINSRPRVLGGGSCINAGFYTRASDEYVRGLGWDLEATTAAYRWV EDVVAFQPELGPWQSALERGLLEAGIAPQNGFTFDHLGGTKVGGSIFDAEGRRHTAAD LLRYARTDGIDVLLRARVAKILFNVRAGRRPVAHGVVFHDSEGQMHRAYLSNGRGNEI ILSAGAMGSPQLLMLSGVGPADHLRSFGITLVLNQPAVGQGMSDNPMNAIYVPSPSPV EVSLIQVVGITEVGSYIEGASGANWGVRRSGSGGDRPHRNFGMFSPQTGQLATVPPKQ RTPEAIARAAEAMSQLDDTAFRGGFILEKILGPLSTGHLELRNRNPDDNPSVTFNYFA HPEDLRRCVAGVSVIERVIRSEAFANFTYPYFSVETLLNMTAGFPVNLRPRHDNDSTS LEQFCKDTVMTIWHYHGGCQVNRVVDAEYRVIGVDALRVIDGSTFNASPGTNPQATVM MLGRYMGVKIQNERLGNEGLGRRNL</aaseq>

Gene Sequence

<dnaseqindica>73..805#905..1314#1414..1979#2156..2222#acacagaaaattaaaccgtactctgatacttcccgtgttacgcctgtcacagcttacttacattggtcgccaatggcgtccgacatggacaccacacgagcgctggccatcttagcggccacaagctttgttgcaatgctagcatgtgtacaggcggcaggagacgagagctacacgttcatgaaggacgcggtgcagtccccgcaggtgtcgtactacgactacatcatcgtgggcggcggcacggccgggtgcccgctcgcggcgacgctgtcgcagcgcttccgcgtgctcctgcttgagcgcggcggctcgccgtacgacgacgagcggatcgggaacatgacacgcttcgcggacacgctgtccgacacgtccccctcgtcgcccgcgcagcggttcgtgtccgaggacggcgtgatcaactcgcgcccgcgggtgctgggcggcggcagctgcatcaacgccgggttctacacgcgcgccagcgacgagtacgtgcgtggactcgggtgggacctcgaggcgaccacggcggcgtaccggtgggtggaggacgtggtggcgttccagccggagctgggtccctggcagtcggcgctggagagagggttgctggaggccgggatcgcgccgcagaacggcttcacgttcgaccacctcggcgggacgaaggtcggcggctcgatcttcgacgccgaggggcggcgccacacggccgccgacctgctccggtacgcccgcaccgacggcatcgacgtgctgctccgagccagagtggccaagatcctgttcaacgtcagaggtaaggataagacgcagattttttactgctcggcaacacgtacgcggggcaccaagaaacgcgacaagaatttacccgaactctgtctctttcctccagctggaagacggccagtggcgcacggggtggtgttccacgattccgaggggcagatgcacagggcttacctcagcaacggccgtggcaacgagatcatcctctcggcgggcgccatgggcagcccgcagttgctgatgctcagcggcgtcggccccgccgaccacctccgctcgttcggcatcacgctcgtcctcaaccagccggccgtcggccagggcatgtccgacaaccccatgaacgccatctacgtgccgtcgccttccccggtcgaggtgtcgctcatccaggtggtcggcatcactgaggtcgggagctacatcgagggcgccagcggcgccaactggggcgtccggcgctccggctccggcggcgacagaccgcaccgcaacttcggcatgttctctccacaggtactgtccataccacgcggccatgcatgcccctgaactgaaactctcacgccattgcaagtgatgatgtgaagagtaagcactcttgtattctcgcagacggggcagctggccacggtgccaccgaagcagcggacgccggaggccatcgcgcgcgcggcggaggcgatgagccagctcgacgacacggcgttccgcggcggcttcatcctggagaagatcctcggcccgctgtccacgggccacctcgagctgcgcaaccgcaaccccgacgacaacccgtcggtgacgttcaactacttcgcgcacccggaggacctccggcgctgcgtggccggcgtgtcggtgatcgagcgcgtcatcaggtccgaggccttcgccaacttcacgtacccgtacttctccgtcgagacgctgctcaatatgacggcggggttccccgtcaacctccggccacggcacgacaacgactccacgtcgctggagcaattctgcaaggacaccgtcatgaccatctggcactaccacggcggctgccaggtgaacagggtcgtcgacgccgagtaccgcgtgatcggcgtcgacgcgctgcgcgtcatcgacggctccacgttcaacgcctcgccgggaaccaatccgcaggccactgtcatgatgctcggcaggtatgcttcctcccttttgcttctttggcatctttacacgcacagtatcaatgtatcgtcagtatatttaattagtcgtcctaaccgtatttattctttctccaagattgcagagatctttaggtcgaatcctatctgtcctattaaaacgattgatcatgtctgttaattgacaggtacatgggagtcaaaatccaaaacgagaggttgggaaatgaaggattaggaaggagaaatctgtaattgaaggcttaagtatttgtaatgcactatgtaatggttgagtcattgaatttcctgattctgatgctagtcatgaactagaatttcgctgggataacatgcacatattattggaagtgtgtgctcttaacttcttatgtactactcaaattcaaatgaaattatgttcactcaataagaaacctttgttcagttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0573100, RefSeq:Os04g0573100