Os04g0574800

From RiceWiki
Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0574800| Description = Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1)| Version = NM_001060156.1 GI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0574800

Description

Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1)

Version

NM_001060156.1 GI:115460041 GeneID:4336734

Length

822 bp

Definition

Oryza sativa Japonica Group Os04g0574800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29330567..29331388

Sequence Coding Region

29330567..29331388

Expression

GEO Profiles:Os04g0574800

Genome Context

<gbrowseImage1> name=NC_008397:29330567..29331388 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29330567..29331388 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatagaaggtggtgctgaaggtgtaatagtgggaggaacaacaggagagggccacctgatgagctgggatgaacacatcatgcttattgggcatacagttaactgctttggcactaaaattaaagtggtcggcaacacaggaagtaactcaacaagggaggctattcacgcaactgagcagggattcgctgtaggtatgcacgcggctctccacatcaatccttactacgggaagacctccgtcgaagggttgatctcccattttgaggctgttctcccaatgggtccaaccatcatttacaatgtgccatccaggactggccaggatattcctcctgctgttattgaggcggtttcaagtttttcaaacatggcaggtgtcaaagaatgtgttggacatgagagggttaagtgctatactgacaaaggtataaccatatggagtggtaatgatgatgaatgccatgattctaggtggaaatatggtgccactggagtcatttctgtagccagcaaccttattcccggtctcatgcgtaagctcatgtacgaaggggagaatacagcgctcaatgataagctacttcctctgatgaaatggttgttttgccagcctaatccgattgcgctcaacaccgccctggctcagcttggagtggcaaggcccgttttcagattaccttatgtacctctcccccttgaaaagagggttgagttcgtccgaattgtcgaatccattggacgggaaaattttgtgggtcagaaagaagcaagggttcttgatgatgatgattttgtgttgatcagtaggtattaa</cdnaseq>

Protein Sequence

<aaseq>MQIEGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGTKIKV VGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSVEGLISHFEAVLPMGPTIIY NVPSRTGQDIPPAVIEAVSSFSNMAGVKECVGHERVKCYTDKGITIWSGNDDECHDSR WKYGATGVISVASNLIPGLMRKLMYEGENTALNDKLLPLMKWLFCQPNPIALNTALAQ LGVARPVFRLPYVPLPLEKRVEFVRIVESIGRENFVGQKEARVLDDDDFVLISRY</aaseq>

Gene Sequence

<dnaseqindica>1..822#atgcagatagaaggtggtgctgaaggtgtaatagtgggaggaacaacaggagagggccacctgatgagctgggatgaacacatcatgcttattgggcatacagttaactgctttggcactaaaattaaagtggtcggcaacacaggaagtaactcaacaagggaggctattcacgcaactgagcagggattcgctgtaggtatgcacgcggctctccacatcaatccttactacgggaagacctccgtcgaagggttgatctcccattttgaggctgttctcccaatgggtccaaccatcatttacaatgtgccatccaggactggccaggatattcctcctgctgttattgaggcggtttcaagtttttcaaacatggcaggtgtcaaagaatgtgttggacatgagagggttaagtgctatactgacaaaggtataaccatatggagtggtaatgatgatgaatgccatgattctaggtggaaatatggtgccactggagtcatttctgtagccagcaaccttattcccggtctcatgcgtaagctcatgtacgaaggggagaatacagcgctcaatgataagctacttcctctgatgaaatggttgttttgccagcctaatccgattgcgctcaacaccgccctggctcagcttggagtggcaaggcccgttttcagattaccttatgtacctctcccccttgaaaagagggttgagttcgtccgaattgtcgaatccattggacgggaaaattttgtgggtcagaaagaagcaagggttcttgatgatgatgattttgtgttgatcagtaggtattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0574800, RefSeq:Os04g0574800