Os04g0576700

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Revision as of 11:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0576700| Description = Conserved hypothetical protein| Version = NM_001060161.1 GI:115460051 GeneID:4336739| Length = 3304 bp| Definition ...")
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Gene Name

Os04g0576700

Description

Conserved hypothetical protein

Version

NM_001060161.1 GI:115460051 GeneID:4336739

Length

3304 bp

Definition

Oryza sativa Japonica Group Os04g0576700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29464411..29467714

Sequence Coding Region

29464438..29464694,29464775..29464867,29464962..29465150,29465235..29465372,29466114..29466339
,29467014..29467206,29467291..29467451

Expression

GEO Profiles:Os04g0576700

Genome Context

<gbrowseImage1> name=NC_008397:29464411..29467714 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29464411..29467714 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaactaaccctaatctcgatctcgacggcgagggcggcgccggcgccggcgcctcgtcgggccgttctttgctgccgaaaggaagtggtaggttccgccgctcgtcggcccgttgttcgctgccgaaagggagtgataggttccgccgctcactatcgccggtgaactcgcggtcgctcctagaaggacgggatgtgcgggacgctgttttccccaacaaactcttcgataaagccttcggccagcctcttccagcgcccgtaacgccgtctctggtaccatcgcccgcttacatcgtgcgccccaacctgccgaccccttccgagccacacggattgaatttcaatgccccacttgttggcgatgggaagatgcaaatggatgtggagggtgccccacttgttggcgatgggaagatgcatatggttgtggagagtaccccacttgttggcgatggcaagatgcatatggttgtggaggaggaaatgacaacagctctggctgttcatcagccttcaagtcagagaagtcagaggatcatagtgattgagatgatggcagatgttggctcaccttcctctcctggctccccctactcccctagttccccttcttctcatcgagacgctccctcggtccgcttctcctctcgaggcatccgtaaccataagatgcctcagtgtgatatagacagatcagacactgaagaagatctatattcatcgtgtgaggaggatccctacttcaatagccttgtggatgatttcatcggtgcagttaccagcaccgatctacttgcatcatcacctgaaattgactatatggcagctaatcaaagtcaatctcttttctatgctgaaagtgcattaaaacattataacaacaatgatgagaacaagataaagtatgagttaatcagtgccattacaagcaatgcaattatagaccggagtggttatggtcatgtaaactttgttgcaaaaggggatctacctgattcagtggatgagttctttttcgcagaagtacgttgggacattgattcttatgtgccagtttgcatggtctccttagaagggaaggaaaaatctggtggttaccgtgacattgaagtcgactatccaagaggaggttttgtgggtgttcccgtcgataagaatcattgctatgcttgtggcgatggactcaagcatccagaggatggaacgttatatgagagtggtcatatcgcttccggcagttattatgactag</cdnaseq>

Protein Sequence

<aaseq>METNPNLDLDGEGGAGAGASSGRSLLPKGSGRFRRSSARCSLPK GSDRFRRSLSPVNSRSLLEGRDVRDAVFPNKLFDKAFGQPLPAPVTPSLVPSPAYIVR PNLPTPSEPHGLNFNAPLVGDGKMQMDVEGAPLVGDGKMHMVVESTPLVGDGKMHMVV EEEMTTALAVHQPSSQRSQRIIVIEMMADVGSPSSPGSPYSPSSPSSHRDAPSVRFSS RGIRNHKMPQCDIDRSDTEEDLYSSCEEDPYFNSLVDDFIGAVTSTDLLASSPEIDYM AANQSQSLFYAESALKHYNNNDENKIKYELISAITSNAIIDRSGYGHVNFVAKGDLPD SVDEFFFAEVRWDIDSYVPVCMVSLEGKEKSGGYRDIEVDYPRGGFVGVPVDKNHCYA CGDGLKHPEDGTLYESGHIASGSYYD</aaseq>

Gene Sequence

<dnaseqindica>28..284#365..457#552..740#825..962#1704..1929#2604..2796#2881..3041#gggagcggagaaagggggggaaaaaagatggaaactaaccctaatctcgatctcgacggcgagggcggcgccggcgccggcgcctcgtcgggccgttctttgctgccgaaaggaagtggtaggttccgccgctcgtcggcccgttgttcgctgccgaaagggagtgataggttccgccgctcactatcgccggtgaactcgcggtcgctcctagaaggacgggatgtgcgggacgctgttttccccaacaaactcttcgataaagccttcggccagcctcttccgtaagttcattcatgccctccctctccacacccatgaggccatgagcatgacttaacctaagaatcgattgctgccgcagagcgcccgtaacgccgtctctggtaccatcgcccgcttacatcgtgcgccccaacctgccgaccccttccgagccacacggattgaatttcaagttgtgcatgtttacccttagctctattgattgattgagtgattgattttactcccctttatattgatttccttgttcttttattcatctgaagtgccccacttgttggcgatgggaagatgcaaatggatgtggagggtgccccacttgttggcgatgggaagatgcatatggttgtggagagtaccccacttgttggcgatggcaagatgcatatggttgtggaggaggaaatgacaacagctctggctgttcatcagccttcaagtcagagaagtcagaggtacttagcacatcttctgccataaatcattcatatataattagaagtagcttaacacatgatctggaaattcctttaactcaggatcatagtgattgagatgatggcagatgttggctcaccttcctctcctggctccccctactcccctagttccccttcttctcatcgagacgctccctcggtccgcttctcctctcgaggcatccgtaaccataagatgtaagttggttctcctatgtgcgttatgtttttgcatatattagcacatactgctgattattaacattgaaattaagaataatagactaaaaattaaattcgtaatgaaacagcacttgacaccaccatttttgagatctgaagttttatgattcatatatgctacttcctccgtttcatattataagactttctagcattgcccacatttatatatatatattaatgaatctaaacatatatatgtctagattcattaacatctatatgaatatgggcaatgctagaaagtcttataatatgaaatggagggagtagaccctagagatggatggtggtaatgcagccgttgcttcacttatttgtgcgctcacttgttaatcatgttcaccagctggcctcatttctcccactccgatgtgtccatccaagcatgttctactatcactctaggctgtgaatatgttgggtgggggattggccatctggtcagcttgggaagtgaaagttacacgaaccattggtactttgggcagatagtaaatgttgggacctaggagatccacggatagaacagtttagtacatataaatgtttgatatatctaaggcttataatttatttaggtctgtaatcaaatggtatatatgttattgacatgagaaaacattttgtagtcaataatacagaggggtgagatttatcatgttaacctttgaaacttttgatgaaatgttttaggcctcagtgtgatatagacagatcagacactgaagaagatctatattcatcgtgtgaggaggatccctacttcaatagccttgtggatgatttcatcggtgcagttaccagcaccgatctacttgcatcatcacctgaaattgactatatggcagctaatcaaagtcaatctcttttctatgctgaaagtgcattaaaacattataacaacaatgatgagaacaaggtaacttttttgcatttcttttgttgtattttctatttatgtacgaatctggctgctagaaatctgtttagatttgtttcttacctcatgctatggtgattagccctctctattcttgtcatggctttgtcatttatttgtagttatctccaattgttcccagcaataatcagattaactcttaaattaaaagttgtggtaggtcggtgaaatctaattcaattttaacttagagcatggacttagcacgccacacagttgtttgatccttttgaatttttgaaacaatattattttttgtattttacttatcttccaaagtttgtatatggctttaattattttgttgtgataccgctatccaagattcttagtattttttttattttccttaactagcaaagtacttgccttgcaacggatttcaaaagatatgtccgaagttcttcacttggaaattgtatttgccaaacataatttgcaagcaaacatccagcaaaaaaccaagccacacacacaaagatatatttatctagacttggaagatctcactaactccaactgatggcagattcaccaccaccactaggttcttttatatagtagagattttacatgtatatgtgttaaatatttgtttactgacttttattgtctttctatttgaaatatagataaagtatgagttaatcagtgccattacaagcaatgcaattatagaccggagtggttatggtcatgtaaactttgttgcaaaaggggatctacctgattcagtggatgagttctttttcgcagaagtacgttgggacattgattcttatgtgccagtttgcatggtctccttagaagggaaggaaaaatctggttagttcgaaagataaccgaaaactctattaatctgttcttttcttctaaattttaacatgtatatgtaattgatgtgtacaggtggttaccgtgacattgaagtcgactatccaagaggaggttttgtgggtgttcccgtcgataagaatcattgctatgcttgtggcgatggactcaagcatccagaggatggaacgttatatgagagtggtcatatcgcttccggcagttattatgactagcagttttattgaaattgcatttttagaactttatttagctagactagaagtgtgcaatcctttatatctatgctaaactaaattagtacggagtatactcaccattctactttgtatacatcttgtttgatttgggttgaactccgagttgtatgtgatacacccgaagacgttattatcgttgcaaatattgaaaaagtcatagaaggtggcaatccactcctgggagtggggatggatatatgttgtcacaagtatgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0576700, RefSeq:Os04g0576700