Os04g0576800

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0576800| Description = 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein| Version = NM_001060162.1 GI:115460053 Ge...")
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Gene Name

Os04g0576800

Description

3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein

Version

NM_001060162.1 GI:115460053 GeneID:4336740

Length

4410 bp

Definition

Oryza sativa Japonica Group Os04g0576800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29470362..29474771

Sequence Coding Region

29471137..29471343,29471969..29472318,29472795..29473029,29473460..29473555,29474215..29474286
,29474419..29474523

Expression

GEO Profiles:Os04g0576800

Genome Context

<gbrowseImage1> name=NC_008397:29470362..29474771 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29470362..29474771 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaccgagggctggcctgccctccagcctctgctgtgcctcgcctggatcgccactacactccccatcattgtcgccgcgctgccaatccccgcagctgctggtggtcacctccttcgccggctgctctcggccttctcctcccgcggcaagaccgtgaggccctcccccgcctcatcctctggttcctcctcttctaaggcgaagttcactgttccacaaaaatacttcatgcatttttatgtggtcggagtgctggcaacaacaattttgcttctggcaatatggttctatgcatatatgaaaatgacaccattattgcctgagtcatcaagttattccacaattgccagccatcttgtaggctcaaattcattctcttttggtcgtgttcactcgcgcaccatgggacacaagtatcatgtctggcgaacagtatttgtacttctattgatggaaattcaagtgctgagacgactatatgagactgaacatgtgttccactacagcccttctgctcggatgcatattgtaggatatttgacgggtctattctattatgtagctgcaccattatctcttgctagctcttgtatccctgaagcagcagagtatcttcaaggtcaagtagctgagttcatagtaaagggtcgtgcgagaatgccagatcttgtaattgattcatcatctctactacagcctcttctgaagttggggtggacccagtggataggtgctgttatattcatttggggttccctccatcagatccgttgccatgcaattcttggaacgttgcgtgagcacaaagattctgatgaatatgtaattccttgtggtgactggtttaatcgagtctcttgccctcattaccttgctgaactagtaatatattttggcatgttggttgctagtggtggagaagacattccagtgtggttcctgttcgtatttgtgatcacaaacctgtcatttgcagcagtagaaactcacaagtggtatcttcaaaagtttgaagactatcctcgctctcgctatgccatcattccatttgtatgctag</cdnaseq>

Protein Sequence

<aaseq>METEGWPALQPLLCLAWIATTLPIIVAALPIPAAAGGHLLRRLL SAFSSRGKTVRPSPASSSGSSSSKAKFTVPQKYFMHFYVVGVLATTILLLAIWFYAYM KMTPLLPESSSYSTIASHLVGSNSFSFGRVHSRTMGHKYHVWRTVFVLLLMEIQVLRR LYETEHVFHYSPSARMHIVGYLTGLFYYVAAPLSLASSCIPEAAEYLQGQVAEFIVKG RARMPDLVIDSSSLLQPLLKLGWTQWIGAVIFIWGSLHQIRCHAILGTLREHKDSDEY VIPCGDWFNRVSCPHYLAELVIYFGMLVASGGEDIPVWFLFVFVITNLSFAAVETHKW YLQKFEDYPRSRYAIIPFVC</aaseq>

Gene Sequence

<dnaseqindica>776..982#1608..1957#2434..2668#3099..3194#3854..3925#4058..4162#agcgctgccttgccttgtcgcccttccccttcgactccattccctcccgcttctcgcgcaacgctatcccgccgccgccgcgtgtctccccaatcccaatcactagcctcctccgtcgaccgtccgccttcccctgagggcggcctgcgtctgcgtggctgcgccgtgccgccgtcgcgcccccgcagcttcttgcgtcttgctgcgcgccgtgccacccgccggcgcctgcgcctgcgccttcctttaccgggctaccaccctgcgccgtctctgactccccggccggcggtcgccctgcccgctgctcctgcacggcgtggctgcaccctagcccctgcccataactccattgtaacaccgcccccagctcgattgccgcctgacacaaggcagacagaggtatgaatctggccttgaattgaatagttgtgagtcttaatcggtacggaactatggataatgatgcaaattgtagtgaatcggcaatgttaatcttagaagagtagattgtggtgcagattaaagaaattgtgttgtacttattttatctatgtaagatctttaatatttgaattatttatatttatatctttgcaactttcaaactttaggtgttgattttagtcgatttgtgatgctatgagatacaattgctttattatgtcataatccgagcaaattttgtgggctaatggcgttattaaattttggaacatgaagtaggaacacccaacaagaaattcctggagctgccattgcggcgctgccttccatggagaccgagggctggcctgccctccagcctctgctgtgcctcgcctggatcgccactacactccccatcattgtcgccgcgctgccaatccccgcagctgctggtggtcacctccttcgccggctgctctcggccttctcctcccgcggcaagaccgtgaggccctcccccgcctcatcctctggttcctcctcttctaaggcggtaagatcggttcaaggtgccgcagcacctatttgctgcttcgccttttctgttatcattcgacaatcccatggagttagtatgattccttggtaaacgaagcttggttagaccttgataagttaagcgaaacttgttcaaagcaaatataggtttgggttggtttgaaaaagatataaccgtggattgtttaaggccaaagtagctagctactgttttgtagtgtttagttgatgcaaatctgaaatattatcgattgattgtgagaagatgatacatttggaagaaattagttcttaaatgtttgggaaccacagttctggacttaaacaatttttttaattggtgtttgtctacaggatatacagccagcttttcttgtcaacttggagatttagttatgctaacttagctatacgaaaaatacataccaagccagttttgtgagtaaaaactaacattatatagtaggatcgaattgattcctcatcggcttttcttgagctatttttcatccaattgatgatcaattgcacatgagaacacgcaccaaatttgtagttcttctcatattcaacttctgtataatgctgataatctcagatcgatcttttctaatctgcagaagttcactgttccacaaaaatacttcatgcatttttatgtggtcggagtgctggcaacaacaattttgcttctggcaatatggttctatgcatatatgaaaatgacaccattattgcctgagtcatcaagttattccacaattgccagccatcttgtaggctcaaattcattctcttttggtcgtgttcactcgcgcaccatgggacacaagtatcatgtctggcgaacagtatttgtacttctattgatggaaattcaagtgctgagacgactatatgagactgaacatgtgttccactacagcccttctgctcggatgcatattgtaggatatttgacgggtctattgtaagctccagcttgctttacatcctttatgttctatatctccatggcacatttgttgtgaaaaatatcccacttgattagttatcatgtcctttactttattctgttgttatgttacatgattttgcttaaaggtttctaaataattcttgtatgcagtttctgcagctcatacatgtaggctgtccacaaaatatacacacatctaatgagttaatttactgcatgatttgtcattgacctgaactgatcaaaagaaataccacttcggtagaaaatagcccaagtgatgctgataactgaattgttcaattcttgacattttatttgctttcttctgccatagtgcttatattaggaagaggatatgcattcatgctacccatgatatttttttcatactattgttgttgttcttttgttttcatgtataacattttcagattgacttatagtttggtttttcttcatgccagctattatgtagctgcaccattatctcttgctagctcttgtatccctgaagcagcagagtatcttcaaggtcaagtagctgagttcatagtaaagggtcgtgcgagaatgccagatcttgtaattgattcatcatctctactacagcctcttctgaagttggggtggacccagtggataggtgctgttatattcatttggggttccctccatcagatccgttgccatgcaattcttgtaagatctatatgctctctaatgtccctatgaccctagatatactagcaagtttcttttacatatatgggcagcatcagaaatcttcctaaaaatgaaaagaaaagaaagaaagaaatccacctatatatgctgtaagttggaactgtcaaactgcaaccataacttgttagtgtaaagctgaaggtatggcttgctggaagtgttctattttttgagagggtggagcccaccaggctttaggaaccccatttacacaaattgcttggtcaatcaacatcaggaatccttcatgaaatgccaatcagattcaatgggttatgcattatgcttgttcagaaactgtggtattatgcattgttgtcttggaaacttctaggctgcggtctatattttgaatttcatggtttgttttttattgcttttacagggaacgttgcgtgagcacaaagattctgatgaatatgtaattccttgtggtgactggtttaatcgagtctcttgccctcattaccttgctgaactagtgagtgtcttttctatgtcctcattttcagtatgtggcatatactgttttgcaaaatatggcaggtcttgttaatctgcttatttaacaacgtcaagttagattaggcctgtccatattgtcttgggtttgtcaataaaaatcatcttggggaagtttggacgggttccaattggtggaagcactagactgattagctcctggtccagcttcaactcctggctggaataggttgggggaaaaacagagaatttgcatgttgcttttgctgggatttagagtttttacactgaagctgaattccagtgcagacttctcatcaaatttgttctgttacctatttcatcactgtagttctctgagtgcaataccatgtgagagtgaatatgtccttttagtatcacccgtactgggaaatgcaaacattctttgcatggcttaaatatgataaaacaggataatattttctgaactttcatattatttcacttgtgtgaagcaactagatgactctaacatgacagcacatatgtttccatgtagcagaattggtgctgtttgacttgacagttgatgcagtagggcactgagctactaaaagagctcctgttgttttaaattattatggcattaacatttacagttactttggcttgtaggtaatatattttggcatgttggttgctagtggtggagaagacattccagtgtggttcctgttcgtatttgtggtacgccctacagtaactttttgaacaaagatagtcagaattcaactaacgcgcaattatcttctacatttagtttcttttgttttttgttccagtagattgaactatcttttttctttttcatttttgcagatcacaaacctgtcatttgcagcagtagaaactcacaagtggtatcttcaaaagtttgaagactatcctcgctctcgctatgccatcattccatttgtatgctagtgtctacgaaatggctacattatgcaaagcttatgtatttgcacacaattacgacatgtaacttagcttgatgtaaatgtgataacaatcatactacgtaccaccgtagaggctggaagtgttgtattgtataacgtagccacgcagaatgtacctgtgacacttcatgctgtgtgttatgctacacacttggatatttatcaacattcttaagcatcgggaataaagttcttgcagaattggattgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0576800, RefSeq:Os04g0576800