Os04g0577300

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0577300| Description = Similar to GDSL-motif lipase/hydrolase-like protein| Version = NM_001060166.1 GI:115460061 GeneID:4336744| Length = ...")
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Gene Name

Os04g0577300

Description

Similar to GDSL-motif lipase/hydrolase-like protein

Version

NM_001060166.1 GI:115460061 GeneID:4336744

Length

2682 bp

Definition

Oryza sativa Japonica Group Os04g0577300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29508637..29511318

Sequence Coding Region

29508639..29508918,29509771..29509914,29509994..29510124,29510214..29510456,29510547..29510805
,29510921..29511156

Expression

GEO Profiles:Os04g0577300

Genome Context

<gbrowseImage1> name=NC_008397:29508637..29511318 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29508637..29511318 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgatgcgggacggcgcgggcggcgctgcagggcggcgcgggcggtggggcagggtggtgccgagctgagcaacggcgcgggctactgggcgacggcggaaggtggcgtccgcgcgcatggtgacggcggcggcggcggaggatgcaagcggcggccgcgagcatggcgacggcggcggcggaggaggcaagcagcggccgcgcgcatcgcgacggcgccagcggtcagccgcgggcagggcgacggctacagacggcggtggcgcggctccagatctgactcccttgttgatgtaggcaacaatgactatcttgtgaccctctccaaggccaatgctccaccatatggtgttgattttgcgttttctggtggcaagccaactggaaggttcacaaatgggaggaccattgccgatgtcattggtgaagccttggggcagaaatcttttgctccaccctacttagctgcaaattcaagtgctgaaatgatgaacagtggtgttaattatgcctctggttcttctggcatatttgatgagaccggctctttttatattggaagagtgccactagggcagcaaatcagctacttcgagaaaaccagagctcgaatactggagatcatgggggagaaggctgctactgggttcttgaagaaggcgctgttcacggttgctgcaggatccaatgacatcttggagtacctttcaccttccatgccattctttggacgagaaaagtatgatccttcagtttttcaggattccttggcttccaacctgacattttatctgaagcggttaaatcaacttggagcaagaaaaattgttgttgctgacgttgggccactgggatgcataccgtatgttcgtgctttagagttcattcctgcaggggagtgttcagcatttgctaaccaactcactcaaggttacaacaagaaactgaagaggatgatctacaagctgaaccaggagatggggcctgagagtagatttgtttacgcaaacacgtacgagatcgtgatggaaatcattcagcagtaccgtcaatacggttttgagaatgcgctggacccatgctgcggaggcagcttccctccatttctctgcatcagcatcgctaactcaacctccaccttatgcaatgaccggtccaagtacgtcttctgggacgcgttccacccgaccgaagccgtcaacttcatcgtcgccggcaagcttctcgacggcaactccgccgttgcttctcccatcaacgtccgagagctgttccaataccaatacaaatga</cdnaseq>

Protein Sequence

<aaseq>GDAGRRGRRCRAARAVGQGGAELSNGAGYWATAEGGVRAHGDGG GGGGCKRRPRAWRRRRRRRQAAAARIATAPAVSRGQGDGYRRRWRGSRSDSLVDVGNN DYLVTLSKANAPPYGVDFAFSGGKPTGRFTNGRTIADVIGEALGQKSFAPPYLAANSS AEMMNSGVNYASGSSGIFDETGSFYIGRVPLGQQISYFEKTRARILEIMGEKAATGFL KKALFTVAAGSNDILEYLSPSMPFFGREKYDPSVFQDSLASNLTFYLKRLNQLGARKI VVADVGPLGCIPYVRALEFIPAGECSAFANQLTQGYNKKLKRMIYKLNQEMGPESRFV YANTYEIVMEIIQQYRQYGFENALDPCCGGSFPPFLCISIANSTSTLCNDRSKYVFWD AFHPTEAVNFIVAGKLLDGNSAVASPINVRELFQYQYK</aaseq>

Gene Sequence

<dnaseqindica>3..282#1135..1278#1358..1488#1578..1820#1911..2169#2285..2520#ggggcgatgcgggacggcgcgggcggcgctgcagggcggcgcgggcggtggggcagggtggtgccgagctgagcaacggcgcgggctactgggcgacggcggaaggtggcgtccgcgcgcatggtgacggcggcggcggcggaggatgcaagcggcggccgcgagcatggcgacggcggcggcggaggaggcaagcagcggccgcgcgcatcgcgacggcgccagcggtcagccgcgggcagggcgacggctacagacggcggtggcgcggctccagatctggtacgcctctcgatctccactctcactccaccctccctctccaccgtccgctgactcaccttcgccggccggcgacgacggcgatggaggggaggtcgcgctggaggtgaggtcgcgtcgcggaagtccggatgggggcgggagaggcggctgttgcaaaatggcgtgaggagagagacactccatttttgcctcttctctctcctaatttggcgcatccgccacttttggagggcctgttagcgtatctgctggagctgatttttccccttttatacggcaaatgaaggatggatgaccggttagaggaactgctggggatgctctaagtgcattttctttctttcttgaggaggatgcattcaatatcacccaaaaatttataagaacttgtcagtgaattgctgaacaaatgcatagatgcattctctttctctattaactaaaacatggtaacagaagcatataagaacaactgtccgactgcatacggggactactactaatctactattgcagtacggctaaccgaaaatcttctggttcagatcctaatgtgtcaccccaattggtactgctgacaccatgcatgttagtccttttctatctcttcctgaagaccttgtcaaatagtacaatacaaagcagacgcagaaagcatgcatgctgcatgccaaattgccaatgccttgtgtatgggaatatatgcagttgtagagacgtttcagtgttgcatcatacaaaagatggctgtgcttcatccgccctgccgctcttccctcttcttagtagtgacgctgctagtttttcgttcatctccagcattgcctcatactttctttatcttcggagactcccttgttgatgtaggcaacaatgactatcttgtgaccctctccaaggccaatgctccaccatatggtgttgattttgcgttttctggtggcaagccaactggaaggttcacaaatgggaggaccattgccgatgtcattggtaatgtcaagtatgaatctcacgaagaaactctgattttcctgtctcgatctcacatttcttggcactgaactctcaggtgaagccttggggcagaaatcttttgctccaccctacttagctgcaaattcaagtgctgaaatgatgaacagtggtgttaattatgcctctggttcttctggcatatttgatgagaccggctctttttatgtatgtgaacactcaattgttgtgcttcctcatgcttgctttgtttctgaaatatagttgtatgaaaacatacttgatctgtgctgtagattggaagagtgccactagggcagcaaatcagctacttcgagaaaaccagagctcgaatactggagatcatgggggagaaggctgctactgggttcttgaagaaggcgctgttcacggttgctgcaggatccaatgacatcttggagtacctttcaccttccatgccattctttggacgagaaaagtatgatccttcagtttttcaggattccttggcttccaacctgacattttatctgaaggtgctacaacttctaactcgcgattactgaatttttctttcttctaatgttatttcaagatgatatgatactttttgttcctcaatgaagcggttaaatcaacttggagcaagaaaaattgttgttgctgacgttgggccactgggatgcataccgtatgttcgtgctttagagttcattcctgcaggggagtgttcagcatttgctaaccaactcactcaaggttacaacaagaaactgaagaggatgatctacaagctgaaccaggagatggggcctgagagtagatttgtttacgcaaacacgtacgagatcgtgatggaaatcattcagcagtaccgtcaatacggtgagctttcttccttgctgcagctacctcttgcgaaaaccacctgcgaatgctgtgctgcagtctgcagagcattagaaaatgcagaatatttcagtcttgcatttgtcttcaggttttgagaatgcgctggacccatgctgcggaggcagcttccctccatttctctgcatcagcatcgctaactcaacctccaccttatgcaatgaccggtccaagtacgtcttctgggacgcgttccacccgaccgaagccgtcaacttcatcgtcgccggcaagcttctcgacggcaactccgccgttgcttctcccatcaacgtccgagagctgttccaataccaatacaaatgagagatgtgcttttgcccagttgctatggcattcattcctgtttggctgtatcaattcccatcctctttcagtcttttcctctgcaatcttctcgggcataattggactggacagcacgcctttaacgagtagaatgtgactgaaagtgcgctttacgacacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0577300, RefSeq:Os04g0577300