Os04g0578600

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0578600| Description = Ferric reductase-like transmembrane component family protein| Version = NM_001060176.2 GI:297603224 GeneID:4336754| ...")
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Gene Name

Os04g0578600

Description

Ferric reductase-like transmembrane component family protein

Version

NM_001060176.2 GI:297603224 GeneID:4336754

Length

2770 bp

Definition

Oryza sativa Japonica Group Os04g0578600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29577394..29580163

Sequence Coding Region

29577476..29578473,29578551..29578878,29578962..29579213

Expression

GEO Profiles:Os04g0578600

Genome Context

<gbrowseImage1> name=NC_008397:29577394..29580163 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29577394..29580163 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaaatgttcttaggtggcaggcgaagctggacagagcagcgctgcggcttggccacgttgggagcttctgctgcgcgttcctgttctttccagtcgcacgcggctcgtccctgttgccgctcattggcctcacgtcggaagccagcatcaagtaccatgtctggctgggcaatctcgttatgctcttcttcacagctcatggactctgctacatcgtcttctgggcatcgactgatcaaatccacgagatgctgaaatggacaagaacgaaagttgcaaacgtccccggggagctcgcgctgctcagcgggctggtgatgtgggtgacggcgctgccgcgcgtccggcgccagatgttcgagctcttcttctacgcgcaccacctctacgccctcttcctcgtgctcttcgcgctccacgtcggcgtcgccttcttctgctccatcctgcctggcgtgttcctcttcatggtcgaccgctacctccggttcctgcagtcccgcgtccgcgtccgactcgtctccgcccgcctcctagcgtgcgacgccgtcgagctcaacttctgcaaaagcccccatttgacgcacagtccgatgagtacggtgttcatcaacgtcccatgcgtttcgcggctccaatggcacccattcacggtgacgtcgagcagcagccttgagcctgacaggttaagcgtcgtcgtcaagagagcaggaagatggacggagaagctgtacgagacgatctcgtccctgccgccgtcgcagcccgggcacctcgacgtctcggtcgaggggccttacagccaggccacaccagcaagcttccttcagtacgactcgttggtgatgatcagtggcggcggcggcatcacgccgttcatctccgtcatacgcgagctcgttcaccggagcggcacggcggcagaagccgcgacgccgagccttctcctcatcgccgtgttcaagacgtcggctgacctggccatgctggacctcatcgtccctgcctccggtgggttctccgacatctcccgcctcgaactgcgcatcgaggccttcgtgacgcgagaaagcgtgccctccgcggcgatgtcgtcgcaatcgccacaaagtgcccnagagagtcttgttcaagccgtcgccgtcgacgcgcccatcgccccggtgctcggccacaacggctggtctgctcgccgcgtcgtctcctcctcattcttcatcttcctcttgctcgtcggcgcggtgcagcgcctgtacatataccccgtcgacggcaacagcaaccgcgtgtacccgtggtcggcaaggacgttgctaaacctgctgctcctctgcgtcggcatcgccgtggcggcgagcgcggccgtcctgtggaacaagcggaggagggccgaggaggcgaagcaggtcgagaacgtggcgacgccagcgtcgtcgccggcaacgtggctcgacaagccgcgtcgtggggacgcagaggtaggccgtcgtcccgatctcagaagtacgatgcaccgttcaatcttgttctccttttgggtcgaattggttctgttacctttgaagagtgcgtga</cdnaseq>

Protein Sequence

<aaseq>MRNVLRWQAKLDRAALRLGHVGSFCCAFLFFPVARGSSLLPLIG LTSEASIKYHVWLGNLVMLFFTAHGLCYIVFWASTDQIHEMLKWTRTKVANVPGELAL LSGLVMWVTALPRVRRQMFELFFYAHHLYALFLVLFALHVGVAFFCSILPGVFLFMVD RYLRFLQSRVRVRLVSARLLACDAVELNFCKSPHLTHSPMSTVFINVPCVSRLQWHPF TVTSSSSLEPDRLSVVVKRAGRWTEKLYETISSLPPSQPGHLDVSVEGPYSQATPASF LQYDSLVMISGGGGITPFISVIRELVHRSGTAAEAATPSLLLIAVFKTSADLAMLDLI VPASGGFSDISRLELRIEAFVTRESVPSAAMSSQSPQSAXESLVQAVAVDAPIAPVLG HNGWSARRVVSSSFFIFLLLVGAVQRLYIYPVDGNSNRVYPWSARTLLNLLLLCVGIA VAASAAVLWNKRRRAEEAKQVENVATPASSPATWLDKPRRGDAEVGRRPDLRSTMHRS ILFSFWVELVLLPLKSA</aaseq>

Gene Sequence

<dnaseqindica>1691..2688#1286..1613#951..1202#acttgtgtcccagtgagtgacaatctaatcctgaccagatacagcggttaattaacaggttaagcgcagggtatcgacgcgatggacactaggcatggccgagacaggaatggcgcgccggcgaccaggagcgccatgcttctcctggccgccgccgtgttcgttgggtggctcatgatgtgggtcatgttgccgaccaggacattcagctcgacgtgggcgccgacgctcgcctcccacacaaattccacctactttggcaaacaaggtttttttccccatctcttgtactatcagctcagctgtatatccattccactgcatatctgcattgccgccgtgatcatctcttcgtgttcttcgtttcgggatttgcagggacgagaatcgtgatctacgtgttcccaatacctgtgcatgtctgaatcgtgaactacactgactttgccaatactgtttgtcagtgtagttgcgtgcatttacctgcacttgctgaagaggagcggcgacagtactggggtccaaagtcagaggtacggtcagttctggctaaactgggagaggagatcaatctcatcagacattccgcatcaaatgtactagtactaatgcaaattttctgcgtgttcctctcttgattttgttcctgcagaggagtattctgtacgagaatggcggcctggaggagacctgtgctggtgagaggtccactgggaattgtgacaggcatagaactcgccttctttctcttgttcctggcactcctggtctggtcctactccgccttcatcaacctcgacttctccaagatccatgtcaagcctgtcgagaaaatgtcgaccaactcacgataaccatgcattaactccgtccaaaaaaaaaagcaaaataatactcgtatatgtttcatctatgatctgtaatttacttgtgtgctaacttttgtaagtatgcgaaatgttcttaggtggcaggcgaagctggacagagcagcgctgcggcttggccacgttgggagcttctgctgcgcgttcctgttctttccagtcgcacgcggctcgtccctgttgccgctcattggcctcacgtcggaagccagcatcaagtaccatgtctggctgggcaatctcgttatgctcttcttcacagctcatggactctgctacatcgtcttctgggcatcgactgatcaaatccacgaggtaatacaaactaacgatttcttctatcgtcctagacatgtccaatgtcgggacttaataaacggccaattatgtgattccagatgctgaaatggacaagaacgaaagttgcaaacgtccccggggagctcgcgctgctcagcgggctggtgatgtgggtgacggcgctgccgcgcgtccggcgccagatgttcgagctcttcttctacgcgcaccacctctacgccctcttcctcgtgctcttcgcgctccacgtcggcgtcgccttcttctgctccatcctgcctggcgtgttcctcttcatggtcgaccgctacctccggttcctgcagtcccgcgtccgcgtccgactcgtctccgcccgcctcctagcgtgcgacgccgtcgagctcaacttctgcaaaagcccccgtaggtgtcacatatatccgacacgttcacggtgcaagtaagcatgttctgacacttgatgtcgtgatcacttgcagatttgacgcacagtccgatgagtacggtgttcatcaacgtcccatgcgtttcgcggctccaatggcacccattcacggtgacgtcgagcagcagccttgagcctgacaggttaagcgtcgtcgtcaagagagcaggaagatggacggagaagctgtacgagacgatctcgtccctgccgccgtcgcagcccgggcacctcgacgtctcggtcgaggggccttacagccaggccacaccagcaagcttccttcagtacgactcgttggtgatgatcagtggcggcggcggcatcacgccgttcatctccgtcatacgcgagctcgttcaccggagcggcacggcggcagaagccgcgacgccgagccttctcctcatcgccgtgttcaagacgtcggctgacctggccatgctggacctcatcgtccctgcctccggtgggttctccgacatctcccgcctcgaactgcgcatcgaggccttcgtgacgcgagaaagcgtgccctccgcggcgatgtcgtcgcaatcgccacaaagtgcccnagagagtcttgttcaagccgtcgccgtcgacgcgcccatcgccccggtgctcggccacaacggctggtctgctcgccgcgtcgtctcctcctcattcttcatcttcctcttgctcgtcggcgcggtgcagcgcctgtacatataccccgtcgacggcaacagcaaccgcgtgtacccgtggtcggcaaggacgttgctaaacctgctgctcctctgcgtcggcatcgccgtggcggcgagcgcggccgtcctgtggaacaagcggaggagggccgaggaggcgaagcaggtcgagaacgtggcgacgccagcgtcgtcgccggcaacgtggctcgacaagccgcgtcgtggggacgcagaggtaggccgtcgtcccgatctcagaagtacgatgcaccgttcaatcttgttctccttttgggtcgaattggttctgttacctttgaagagtgcgtgaaatgcgaaatttgtctgtgcaacgatgttgcttgtcgaaacaagatttcggcaataataaaagaggtggctatcaagcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0578600, RefSeq:Os04g0578600