Os04g0578800

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0578800| Description = Protein of unknown function DUF604 family protein| Version = NM_001060178.1 GI:115460085 GeneID:4336756| Length = 26...")
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Gene Name

Os04g0578800

Description

Protein of unknown function DUF604 family protein

Version

NM_001060178.1 GI:115460085 GeneID:4336756

Length

2671 bp

Definition

Oryza sativa Japonica Group Os04g0578800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29592894..29595564

Sequence Coding Region

29593424..29593546,29593934..29595385

Expression

GEO Profiles:Os04g0578800

Genome Context

<gbrowseImage1> name=NC_008397:29592894..29595564 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29592894..29595564 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcggcggcggtggcggcaaggaggccgtcaccgcctccatcctccggttcctcctcctgctccttctccccctcaccgccctctatttcttctacacgctgcacctcctcctcgcctccgccgcctcgtcatcctcctcctcctgcccacctgacgctgcctcctcctcctcctccgtgcgcttgtcgaccaatggcaccagcgcgggtgctgctgcggtgacggtggcggcagggaagaaggcccccgccgcggcctccacggagacgacgctgcagcatgtcgtgttcggcatcgcggcgtcgtcgcggttctgggacaagcggaaggagtacatcaaggtgtggtggcggccccgcggcgccatgcgtgggtacgtgtggctggaccgcgaggtgcgcgagtccaacatgtccacggcgcggacggggctcccggccatcaggatctcgtcggacacctcgggcttcccctacacgcaccgccgcggccaccgctccgccatccgcatctcccggatcgtctcggagaccttccgcctcggcctccccggcgtgcggtggttcgtgatgggcgacgacgacaccgtcttcttcccggacaacctcctcaccgtcctcaacaagttcgaccaccgccagccatactacatcggctccctctccgagagccacctgcagaatatctacttctcctacgggatggcgtacggcggcggcggcttcgccattagccggccgctcgcggaggcgctcgcgcggatgcaggacgggtgcatacgccggtaccccgcgctgtatggtagcgacgaccggatccaggcgtgcatggcggagctgggcgtgccgctcaccaagcacccgggtttccaccagtacgacgtgtacggcgacctcctcggcctcctcgccgcccacccggtggcgccgatcgtgacgctgcaccacctcgacgtcgtgcagcccctgttcccgaacgccaagtcgcgccccgccgcggtgcgtaggctgttcgacgggccgatcgagctggacccggcggggataatgcagcagtccatctgctacgacggcggcaaccgatggacggtgtcagtggcgtgggggttcgccgtgctggtgtccaggggagtaatgtcgccgcgggagatggagatgccggcgcggacgttcttgaactggtaccgccgtgccgactacacggcgtacgcgttcaacacgaggcccctggcgcgaagcccgtgccagaagccggcggtgtactacctctcatcggcgcggcgcgcggccgccctgcgcggcggggacaccacggtgacgcggtatgagcggtggcgccgcgccaacgagacgcggcccgcgtgccggtggaatatcgcggatccggacgcgcatctcgatcacatcgtcgtgctcaagaagcccgaccccgggctatgggacaggtctccaaggagaaattgctgtagggtgctatcttcgcccaaggaagggaagaagggaggggacaagacgatgaccatcgacgtgggagtatgcagggatggcgagttcagccaagttgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MKGGGGGGKEAVTASILRFLLLLLLPLTALYFFYTLHLLLASAA SSSSSSCPPDAASSSSSVRLSTNGTSAGAAAVTVAAGKKAPAAASTETTLQHVVFGIA ASSRFWDKRKEYIKVWWRPRGAMRGYVWLDREVRESNMSTARTGLPAIRISSDTSGFP YTHRRGHRSAIRISRIVSETFRLGLPGVRWFVMGDDDTVFFPDNLLTVLNKFDHRQPY YIGSLSESHLQNIYFSYGMAYGGGGFAISRPLAEALARMQDGCIRRYPALYGSDDRIQ ACMAELGVPLTKHPGFHQYDVYGDLLGLLAAHPVAPIVTLHHLDVVQPLFPNAKSRPA AVRRLFDGPIELDPAGIMQQSICYDGGNRWTVSVAWGFAVLVSRGVMSPREMEMPART FLNWYRRADYTAYAFNTRPLARSPCQKPAVYYLSSARRAAALRGGDTTVTRYERWRRA NETRPACRWNIADPDAHLDHIVVLKKPDPGLWDRSPRRNCCRVLSSPKEGKKGGDKTM TIDVGVCRDGEFSQVV</aaseq>

Gene Sequence

<dnaseqindica>2019..2141#180..1631#gaacgctttagcaaacacgcggagaaggagaatgcgcgcaacctcgcgcgccacgccgcccgtgtaaatctattggtgggattttcccttcggttccccaagaggcggaaggaagattggccggataagccggaggccacggaggggcggtgacgagcagagcggccacggcggccggaatgaagggcggcggcggtggcggcaaggaggccgtcaccgcctccatcctccggttcctcctcctgctccttctccccctcaccgccctctatttcttctacacgctgcacctcctcctcgcctccgccgcctcgtcatcctcctcctcctgcccacctgacgctgcctcctcctcctcctccgtgcgcttgtcgaccaatggcaccagcgcgggtgctgctgcggtgacggtggcggcagggaagaaggcccccgccgcggcctccacggagacgacgctgcagcatgtcgtgttcggcatcgcggcgtcgtcgcggttctgggacaagcggaaggagtacatcaaggtgtggtggcggccccgcggcgccatgcgtgggtacgtgtggctggaccgcgaggtgcgcgagtccaacatgtccacggcgcggacggggctcccggccatcaggatctcgtcggacacctcgggcttcccctacacgcaccgccgcggccaccgctccgccatccgcatctcccggatcgtctcggagaccttccgcctcggcctccccggcgtgcggtggttcgtgatgggcgacgacgacaccgtcttcttcccggacaacctcctcaccgtcctcaacaagttcgaccaccgccagccatactacatcggctccctctccgagagccacctgcagaatatctacttctcctacgggatggcgtacggcggcggcggcttcgccattagccggccgctcgcggaggcgctcgcgcggatgcaggacgggtgcatacgccggtaccccgcgctgtatggtagcgacgaccggatccaggcgtgcatggcggagctgggcgtgccgctcaccaagcacccgggtttccaccagtacgacgtgtacggcgacctcctcggcctcctcgccgcccacccggtggcgccgatcgtgacgctgcaccacctcgacgtcgtgcagcccctgttcccgaacgccaagtcgcgccccgccgcggtgcgtaggctgttcgacgggccgatcgagctggacccggcggggataatgcagcagtccatctgctacgacggcggcaaccgatggacggtgtcagtggcgtgggggttcgccgtgctggtgtccaggggagtaatgtcgccgcgggagatggagatgccggcgcggacgttcttgaactggtaccgccgtgccgactacacggcgtacgcgttcaacacgaggcccctggcgcgaagcccgtgccagaagccggcggtgtactacctctcatcggcgcggcgcgcggccgccctgcgcggcggggacaccacggtgacgcggtatgagcggtggcgccgcgccaacgagacgcggcccgcgtgccggtggaatatcgcggatccggacgcgcatctcgatcacatcgtcgtgctcaagaagcccgaccccgggctatgggacagggtaattcttctctgccaatccatcttctgttgcaacaaaaaaattcgtcttctgttgcttactgctagccatcacacttgatacagcaaatgctattactgaacatgatccatcccctttttagctagcaagaaacaaaaacgtaaaatgaactgcattactgcaaatagtacttgtgcaagtattataacaccaagattgaacattgtttgagtataatacgacgaaactagcatgggtactgtacgtgtaatagtactaggtttgtttgacaactagcaggaatgttatatgcaaattgccatctgaagcttagtttcttgatcttggttgtggtgttcaaagttcaaactgtactgacgatgcacatttcacatggtcatgcagtctccaaggagaaattgctgtagggtgctatcttcgcccaaggaagggaagaagggaggggacaagacgatgaccatcgacgtgggagtatgcagggatggcgagttcagccaagttgtgtaatactgtaacctagccaaagtgaaataggatgattcaattttttttctcttctgttcttgtattcttctcggaagattacaaacttgtcatctcctgccgcgtcttcttttcgcctcacgagtcaccaactacaaagaactcgaaattttggccggaccttttccactatacatttgctgcccccacggctacgggccatggctactccggtccggtctacagtgacggaggcggggcacagaagagtgcactagtggatgctcagcgtgcttctgctgtgtatagtagactttgtgctgcagttgcagacttgcagtagtgctgtaaactgtggggctgcaacttggaccttgtgaaagcgcggcctagcattacgatttacgagctccatgtgaccacggcgcaggacagcagacaacagtcgccacgcgtcgtgggatggaaacggaaacgagggtctcacctctgttctgggggcatggtctactcgtgaaatcttacccgcggcaatacatttcccccttcgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0578800, RefSeq:Os04g0578800