Os04g0579700

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0579700| Description = Similar to Predicted protein| Version = NM_001060180.1 GI:115460089 GeneID:4336758| Length = 2135 bp| Definition = ...")
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Gene Name

Os04g0579700

Description

Similar to Predicted protein

Version

NM_001060180.1 GI:115460089 GeneID:4336758

Length

2135 bp

Definition

Oryza sativa Japonica Group Os04g0579700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29645997..29648131

Sequence Coding Region

29646177..29646779,29646864..29647862

Expression

GEO Profiles:Os04g0579700

Genome Context

<gbrowseImage1> name=NC_008397:29645997..29648131 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29645997..29648131 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccccgccgcagccgcccacctcctacccgtccagctacaccaagttcaactccgcgctcaacgccggcctcctcaacccaatgtccccgccgccgctgccgctcgacaagacgcgctccagcccaaccctcttcgacatgatggccaacgagcaggactaccacccgcgcaccgccgccgccatccactccatcccggccccgccgcagcaggcgcacccgctgcagcccgcccgctccatggacaggcaggtgctgctccaggatcgcgtcgccgagctcatcggcagctgcagccccgggaaccagttcaacgacgccgactcctccgacgtccgcctcaccctcacctccaaggatggcctctccgtcacgctctgcgtgcaccgccacatactcgtcgcccacagcaggttcttcgccgccaagctctccgaccgctggtccaagcagcagaggacgttgccgcacatcgttgagatctccgactgcgacgatgtcgaggtctacgtcgagacgctgcggctcatgtactgcaaggatctccgccggaggctcatgagggaggatgtgagcaaggtcctcggcattctaaaggtgtccgcggccattgtgttcgacgctggggtcctgtcttgcttggagtatttagaggcagctccgtgggcggaggatgacgatgagaaggtggcggcattgttgacacagctgcacctcgagaactcgggcgctggggaggtgcttaagagggtctcactggagttggctccctcggcagtggctgaagaggtggaggtcggcagtggttgcaatggtggtggcaattcaggtggtggggaggaggtgttagtgaggctcctgcaggtcgtcctggaagggaaggacgagaaggcaaggagggagatgaaggggctggtttccaaaatgctcagggagaacagcacatcgcgtggaggagccattggaggtgacctccggaaggagtcactgtattcggcgtgcaatggctgcttgcgcctgctgcatgaacaatttgagatggctgcagggggtgaccaatctgaggtagcgcagattgccaggcaggctgacaaccttcactggatgcttgacatccttgtcgaacgccagattgccgaggatttcttgaggacgtgggcaatgcagattgagttggcagagttgcatggcaaggtgccagcaatacaccgctatgaagttagccgagtgacggcaagactctttgttggggttggcaagggacagatcttggtgtccaaggaggtccgttgtcaactcttgagtacttggttagaaccattctatgaagactttggatggatgaggcgagcctgcaaggggcttgaccggcatttgattgaggatggactggcaaacaccatcctgacactgccgctagcaactcagcaggagatcttgctggcatggttcaatcggttcctgaactctggggaggactgcccaaatattcagagaggattcgaggtatggtggcggcgtgccttctggaaaagaaacggtgaacccgagcaaccacctcgtttgaggatcacagcaatctgtgagaattcttga</cdnaseq>

Protein Sequence

<aaseq>MDPPPQPPTSYPSSYTKFNSALNAGLLNPMSPPPLPLDKTRSSP TLFDMMANEQDYHPRTAAAIHSIPAPPQQAHPLQPARSMDRQVLLQDRVAELIGSCSP GNQFNDADSSDVRLTLTSKDGLSVTLCVHRHILVAHSRFFAAKLSDRWSKQQRTLPHI VEISDCDDVEVYVETLRLMYCKDLRRRLMREDVSKVLGILKVSAAIVFDAGVLSCLEY LEAAPWAEDDDEKVAALLTQLHLENSGAGEVLKRVSLELAPSAVAEEVEVGSGCNGGG NSGGGEEVLVRLLQVVLEGKDEKARREMKGLVSKMLRENSTSRGGAIGGDLRKESLYS ACNGCLRLLHEQFEMAAGGDQSEVAQIARQADNLHWMLDILVERQIAEDFLRTWAMQI ELAELHGKVPAIHRYEVSRVTARLFVGVGKGQILVSKEVRCQLLSTWLEPFYEDFGWM RRACKGLDRHLIEDGLANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWR RAFWKRNGEPEQPPRLRITAICENS</aaseq>

Gene Sequence

<dnaseqindica>181..783#868..1866#ccttccacctccacctccagatccaggccgttgttccccaagccttccccttcccacctcgtcccccacgacctcgcctcctcctggtgctgcgctccgcacggccacacccccacccccgccgccgccgctgcctcttcctccccgtcatcccaatccagctcccccgccgccgaaacgatggatcccccgccgcagccgcccacctcctacccgtccagctacaccaagttcaactccgcgctcaacgccggcctcctcaacccaatgtccccgccgccgctgccgctcgacaagacgcgctccagcccaaccctcttcgacatgatggccaacgagcaggactaccacccgcgcaccgccgccgccatccactccatcccggccccgccgcagcaggcgcacccgctgcagcccgcccgctccatggacaggcaggtgctgctccaggatcgcgtcgccgagctcatcggcagctgcagccccgggaaccagttcaacgacgccgactcctccgacgtccgcctcaccctcacctccaaggatggcctctccgtcacgctctgcgtgcaccgccacatactcgtcgcccacagcaggttcttcgccgccaagctctccgaccgctggtccaagcagcagaggacgttgccgcacatcgttgagatctccgactgcgacgatgtcgaggtctacgtcgagacgctgcggctcatgtactgcaaggatctccgccggaggctcatgagggaggatgtgagcaaggtcctcggcattctaaaggtgcgcccttttttccttctttcatccggaatcactgacttttgtccactgatcactgagatttccttctttctgtgattgtaggtgtccgcggccattgtgttcgacgctggggtcctgtcttgcttggagtatttagaggcagctccgtgggcggaggatgacgatgagaaggtggcggcattgttgacacagctgcacctcgagaactcgggcgctggggaggtgcttaagagggtctcactggagttggctccctcggcagtggctgaagaggtggaggtcggcagtggttgcaatggtggtggcaattcaggtggtggggaggaggtgttagtgaggctcctgcaggtcgtcctggaagggaaggacgagaaggcaaggagggagatgaaggggctggtttccaaaatgctcagggagaacagcacatcgcgtggaggagccattggaggtgacctccggaaggagtcactgtattcggcgtgcaatggctgcttgcgcctgctgcatgaacaatttgagatggctgcagggggtgaccaatctgaggtagcgcagattgccaggcaggctgacaaccttcactggatgcttgacatccttgtcgaacgccagattgccgaggatttcttgaggacgtgggcaatgcagattgagttggcagagttgcatggcaaggtgccagcaatacaccgctatgaagttagccgagtgacggcaagactctttgttggggttggcaagggacagatcttggtgtccaaggaggtccgttgtcaactcttgagtacttggttagaaccattctatgaagactttggatggatgaggcgagcctgcaaggggcttgaccggcatttgattgaggatggactggcaaacaccatcctgacactgccgctagcaactcagcaggagatcttgctggcatggttcaatcggttcctgaactctggggaggactgcccaaatattcagagaggattcgaggtatggtggcggcgtgccttctggaaaagaaacggtgaacccgagcaaccacctcgtttgaggatcacagcaatctgtgagaattcttgattacgttggttcagttctcggatacaatgtgtggctgatgttgtgatgtaaaggttaatgctgtgtgatctgtagttgtgatctaactgtcttgttgagctctctattatttctgtttgatttaggtgattatacacgagtatgttcatcttgttcaattataccagatctgatgtacctctatgctggatccattttgaattggaaatgaagtaggatgtttttttttcccacctagtataatcagtgttacctggacactcttatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0579700, RefSeq:Os04g0579700