Os04g0580800

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0580800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001060185.1 GI:115460099 GeneID:4336763| Length = 108...")
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Gene Name

Os04g0580800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001060185.1 GI:115460099 GeneID:4336763

Length

1088 bp

Definition

Oryza sativa Japonica Group Os04g0580800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29715873..29716960

Sequence Coding Region

29716315..29716803

Expression

GEO Profiles:Os04g0580800

Genome Context

<gbrowseImage1> name=NC_008397:29715873..29716960 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29715873..29716960 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctttccgctggtgtgcttctgccgccagatcccgcggcccatcgtcgcgctgttcaagctgctccaggccgtggcgctggccttcgtgctgatactctgcttcctcggcctctacgagttcccctacaccgtcgaggaccacgcgccgctcatccacggccgccgccgcgatcccctcggcgacgacggcctgcagcccgaggcggtgaagcggggcctcccgctggtcgagtacatgcaactcgccgacctgtcggcggattgccacgacggcgagagcggctacccggccacgtgcagggtgtgcctggagaggttggaggcgacggacgaggtgaggcggctgggcaactgcacccacgccttccacatcggctgcatcgaccggtggatcgacctgggagaggtgacgtgcccgctctgtcggtcccacctgctgccacgtcaacgaaggggcctgcttggcagtaggcggttcggctag</cdnaseq>

Protein Sequence

<aaseq>MSFPLVCFCRQIPRPIVALFKLLQAVALAFVLILCFLGLYEFPY TVEDHAPLIHGRRRDPLGDDGLQPEAVKRGLPLVEYMQLADLSADCHDGESGYPATCR VCLERLEATDEVRRLGNCTHAFHIGCIDRWIDLGEVTCPLCRSHLLPRQRRGLLGSRR FG</aaseq>

Gene Sequence

<dnaseqindica>158..646#gccctctaaaaccagacactgctgctgcgtgtctgtgtgccgcgccacctatgcacctcgcgcgcgcggcaagcgctcctcctgccggcgccttcccctgtccctcgcttgcctccagctgcagcagaggagcgcgtgtgcgtgtgtgtacggtgccatgagctttccgctggtgtgcttctgccgccagatcccgcggcccatcgtcgcgctgttcaagctgctccaggccgtggcgctggccttcgtgctgatactctgcttcctcggcctctacgagttcccctacaccgtcgaggaccacgcgccgctcatccacggccgccgccgcgatcccctcggcgacgacggcctgcagcccgaggcggtgaagcggggcctcccgctggtcgagtacatgcaactcgccgacctgtcggcggattgccacgacggcgagagcggctacccggccacgtgcagggtgtgcctggagaggttggaggcgacggacgaggtgaggcggctgggcaactgcacccacgccttccacatcggctgcatcgaccggtggatcgacctgggagaggtgacgtgcccgctctgtcggtcccacctgctgccacgtcaacgaaggggcctgcttggcagtaggcggttcggctagattgtctcgcggcacggcgccatgggggcagtttcgtcatttcaggctgtacatctcgccattgttgctggatgggtgcaggccaaccgcagactgattccgatcaggacgactaaccaccaagcagtaccggtgctaatcaattgatagttgtgctcacgcgaaaattaatggcattttggaattccacgggtgtactttaacgcatagttgcatccgacgagctaggtaacgtgcacccgtttagagcgagtacaatggcaggctacaagtaagctataagcatacgtggaagagagaagagataagagagaaggaaaacaggctatatatttacagccagcttcagcacggaatctaatacattgtgcgtgtatgagatgtaggatcatatattaatagtgtactactccctccatttcacaatataagtcattctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0580800, RefSeq:Os04g0580800