Os04g0581100

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0581100| Description = Isopenicillin N synthase family protein| Version = NM_001060187.1 GI:115460103 GeneID:4336765| Length = 1694 bp| De...")
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Gene Name

Os04g0581100

Description

Isopenicillin N synthase family protein

Version

NM_001060187.1 GI:115460103 GeneID:4336765

Length

1694 bp

Definition

Oryza sativa Japonica Group Os04g0581100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29737978..29739671

Sequence Coding Region

29738192..29738452,29738552..29738873,29738993..29739240,29739349..29739576

Expression

GEO Profiles:Os04g0581100

Genome Context

<gbrowseImage1> name=NC_008397:29737978..29739671 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29737978..29739671 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccagccattgccaagcctctcctgagcgatctggtggcacaatccgggcaagtcccctcgagccacattcgtccggttggcgaccgcccggacctcgacaacgtcgaccacgagtccggcgccggcattccggtcatcgacctgaaacagctcgacggcccggatcgccgcaaggttgtcgaggccatcggttcggcgtgcgaaaccgacggttttttcatggtgaagaatcacgggatcccggaggaggtggtggaagggatgctgcgcgtggcgagggagttcttccacatgccggagtcggagcggctcaagtgctattccgacgaccccaagaaggcgatccggctgtcgacgagcttcaacgtgcgcaccgagaaggtgagcaactggcgcgacttcctgcgcttgcattgctaccctctcgagagcttcatcgaccagtggccctccaacccaccctccttcaggcaagtggtcggcacctactcgagggaggcgagggcgctggcgctgcggttgctggaggcgatatctgagagcctcgggctggagaggggccacatggtgtcggccatggggcggcaggcgcagcacatggcggtgaactactatccgccatgcccacagccggagctcacctacggcctgccggggcacaaggaccccaatgccatcacgctgctgctccaggacggcgtctccggcctgcaggtccagcgcaacggccgctgggtggccgtcaaccccgtgcccgacgccctggtcatcaacatcggagatcaaatccaggcgctgagcaacgaccggtataagagcgtgctccaccgggtgatcgtgaacagcgagagcgagaggatctccgtgccgacgttctactgcccgtccccggacgcggtgatcgcgccggccggcgcgctggtggacggcgccctgcacccgctggcgtaccggcccttcaagtaccaggcctactacgacgaattctggaacatgggcctccagtccgccagctgcttagaccggttccggcctaacgatcaggccgtctga</cdnaseq>

Protein Sequence

<aaseq>MAPAIAKPLLSDLVAQSGQVPSSHIRPVGDRPDLDNVDHESGAG IPVIDLKQLDGPDRRKVVEAIGSACETDGFFMVKNHGIPEEVVEGMLRVAREFFHMPE SERLKCYSDDPKKAIRLSTSFNVRTEKVSNWRDFLRLHCYPLESFIDQWPSNPPSFRQ VVGTYSREARALALRLLEAISESLGLERGHMVSAMGRQAQHMAVNYYPPCPQPELTYG LPGHKDPNAITLLLQDGVSGLQVQRNGRWVAVNPVPDALVINIGDQIQALSNDRYKSV LHRVIVNSESERISVPTFYCPSPDAVIAPAGALVDGALHPLAYRPFKYQAYYDEFWNM GLQSASCLDRFRPNDQAV</aaseq>

Gene Sequence

<dnaseqindica>1220..1480#799..1120#432..679#96..323#actaaaacctcattaattgatcaaggcagcgagtagccccagctaaccattacacgggcattccatctccagccatccctagggctgtaattaacatggctccagccattgccaagcctctcctgagcgatctggtggcacaatccgggcaagtcccctcgagccacattcgtccggttggcgaccgcccggacctcgacaacgtcgaccacgagtccggcgccggcattccggtcatcgacctgaaacagctcgacggcccggatcgccgcaaggttgtcgaggccatcggttcggcgtgcgaaaccgacggttttttcatggtacgtgcacgcgccataacacatccgtgagagtgagactgatcgtggccatcggcaaggcctgcttgaacagtggatctgacggtggtttacgatatgaaaatataggtgaagaatcacgggatcccggaggaggtggtggaagggatgctgcgcgtggcgagggagttcttccacatgccggagtcggagcggctcaagtgctattccgacgaccccaagaaggcgatccggctgtcgacgagcttcaacgtgcgcaccgagaaggtgagcaactggcgcgacttcctgcgcttgcattgctaccctctcgagagcttcatcgaccagtggccctccaacccaccctccttcaggtcagccctggacgtaaatcatgaatgtttaaaaagtcaaaaatgcaaagatggaacataggctacgcctacgcacatggaagatggtaaaaattgacaaatttaacatgttgtactaggcaagtggtcggcacctactcgagggaggcgagggcgctggcgctgcggttgctggaggcgatatctgagagcctcgggctggagaggggccacatggtgtcggccatggggcggcaggcgcagcacatggcggtgaactactatccgccatgcccacagccggagctcacctacggcctgccggggcacaaggaccccaatgccatcacgctgctgctccaggacggcgtctccggcctgcaggtccagcgcaacggccgctgggtggccgtcaaccccgtgcccgacgccctggtcatcaacatcggagatcaaatccaggtatgtgtactaatcgtaaatattatacgcagttccatctactgagtatatcaattaatttaggccgatcgattgattaactgattaaatttcgtgcaggcgctgagcaacgaccggtataagagcgtgctccaccgggtgatcgtgaacagcgagagcgagaggatctccgtgccgacgttctactgcccgtccccggacgcggtgatcgcgccggccggcgcgctggtggacggcgccctgcacccgctggcgtaccggcccttcaagtaccaggcctactacgacgaattctggaacatgggcctccagtccgccagctgcttagaccggttccggcctaacgatcaggccgtctgattatggtccataaacttttcttgaaaaaggaaaagattgtgatccataaacaggccatgcaaaatatatccttacatccgatgcgacgtgttataccactaaaaaaggtgctcctctaccctagctttctcgaaaaaaataaaacaaagtggagcactaccaatctagatctatgtgacgctaaacaatagacatgtgagtgaaatatgttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0581100, RefSeq:Os04g0581100