Os04g0582800

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0582800| Description = Conserved hypothetical protein| Version = NM_001187133.1 GI:297723396 GeneID:9270804| Length = 9039 bp| Definition ...")
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Gene Name

Os04g0582800

Description

Conserved hypothetical protein

Version

NM_001187133.1 GI:297723396 GeneID:9270804

Length

9039 bp

Definition

Oryza sativa Japonica Group Os04g0582800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29836556..29845594

Sequence Coding Region

29836556..29836690,29837593..29837843,29838131..29838326,29838450..29839568,29839857..29840417
,29845472..29845594

Expression

GEO Profiles:Os04g0582800

Genome Context

<gbrowseImage1> name=NC_008397:29836556..29845594 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29836556..29845594 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaggcggggcggcaaggcgcgggggaaggtcgcggaggaggaatggccgagcctggtggatctggtgcttggctggaaactcgaggacgtcatgaacgagaacctcttcaaggacaagatgaaaaggataccgtccacattcagtgatctcaagagctacttagagtcctacacctctccattgctggaggagatgcggacggagatgtcttctagcttggaagccatatccaccatgccttctaccaaaatttcgtggatcgagcaaaagaaaaacaacaaagtttacgacattgttttcgatgctgattctcagaattctaaggcatgtaaccgacctgaaagttatgttccaagtgttggtgatatcattatcctgtctgatgtgaagccggagcatatttctgacatcactcgcaatgggaggccatatattgttgcctttgtcacagaaggaggggatgaagacgacgactcacctccagttaagtatgtgatcatatcatcaggaaaaattgattctgaagatggcaagtgtcaagataggaaagagatcaaactttttgctgcctatttgctcaatattgtaacatacatccgtatatggcgctgccttgactacaacactgcagtcagaagaaatcaaagcctcatacaggagatggtacattatccactggttgcagacattgttcagaaacagaaaaaggatcattctatcgacagtatggagatatggagtaaactgtctacgatggatcttaacaattctcagaatgatgcgatcttgaattgtatctcatcaatgcatagcaacaacagcagtagcagttttagccttatctggggacctcctggcacaggaaagacaaaaacaatcagtgttctgttgtggttgatgagagaaatggaccatggtactctaacatgtgcacccacaaaccttgctgttaaacaagttgcttcgcgtttcttgaaggtgatcaaagagtcttcggatagagcctgcttaggagatgttctactctgtggcaataaacaacgcatgtgtgttgacggtaatctcaaagagatctatttacatgatcgtgtaaggacgctgcttggatgctttgtgccaatgactggatggagacatcgcctatcttccctatctgatctttttgagaatggttactcccagtatcagaaatatctggaagaccaaaaggaaggtgatagccttaccttttattcttacactaggaaaagatttaatgctacttatccagagcttcgaagatgtttcaaagaagtactattccatgttccaaaatccactatcttggaagtgaattacaacaatatcatttcacttctagagctgcttgaagatttcaacaagaaattcatgaacaaaaatattgaggatgaagtgaagggaattttcctgtataatgatgatcaatctgattccagtgtatccagtctgacaaaattttctaaaacagcaatcagcctcgggaaaatcagaattagatgtctcgagctactgaatatgttattaagtagcttgaaacttcctataacttcctccaaacgtaccattcgggagttctgtatggaaagcgcctccatagttttctgcactgtatctagctcttccaaaataagtaataaaaaactacagttgcttgttgttgatgaggctgctcagttaaaagaatgtgaaggattgatcccgttgcgtttgcctactttaaagcatgctattcttattggtgacgagtgccaattgccagcaactgtcaaaagcaaggtttgtgaggatgcgtcgttcgggagaagcctcttcgagaggttgagttcactgggacatgaaaaacatctccttaatatgcaatacagaatgcacccatccattagtatctttccaaacatcagcttctatgataggaaactcttagatgctcctaatgtcaagcagaaagaacaccgaaagaagtaccttccagcccattctaaaaccaaaaataaggttacagttggtgtcatatgtccatatactgctcaagtcctagcaattcaacaaaaactcgggaaaatgaagtttgacccggtcatagtaaaaattaattctggtgatggctttcaaggtggtgaggaagacataatcactttatcaactgtgaggtccaactcagatggggctgtaggttttcttgtcaaaccggcagcgcacaaatgtgtcacttacacgagcaaggttcaagtgccatcccgaagtgggatgaaagatgaaagcccttcaacttcaactggcattggtggtttccccggggatacagaagaaaatgtagaggatatcaccgtatgcttaagtaatcttaaaattcgttga</cdnaseq>

Protein Sequence

<aaseq>MIRRGGKARGKVAEEEWPSLVDLVLGWKLEDVMNENLFKDKMKR IPSTFSDLKSYLESYTSPLLEEMRTEMSSSLEAISTMPSTKISWIEQKKNNKVYDIVF DADSQNSKACNRPESYVPSVGDIIILSDVKPEHISDITRNGRPYIVAFVTEGGDEDDD SPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTYIRIWRCLDYNTAVRRNQS LIQEMVHYPLVADIVQKQKKDHSIDSMEIWSKLSTMDLNNSQNDAILNCISSMHSNNS SSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPTNLAVKQVASRFLKVIKESS DRACLGDVLLCGNKQRMCVDGNLKEIYLHDRVRTLLGCFVPMTGWRHRLSSLSDLFEN GYSQYQKYLEDQKEGDSLTFYSYTRKRFNATYPELRRCFKEVLFHVPKSTILEVNYNN IISLLELLEDFNKKFMNKNIEDEVKGIFLYNDDQSDSSVSSLTKFSKTAISLGKIRIR CLELLNMLLSSLKLPITSSKRTIREFCMESASIVFCTVSSSSKISNKKLQLLVVDEAA QLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVCEDASFGRSLFERLSSLGHEKH LLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPAHSKTKNKVTVGVICP YTAQVLAIQQKLGKMKFDPVIVKINSGDGFQGGEEDIITLSTVRSNSDGAVGFLVKPA AHKCVTYTSKVQVPSRSGMKDESPSTSTGIGGFPGDTEENVEDITVCLSNLKIR</aaseq>

Gene Sequence

<dnaseqindica>8905..9039#7752..8002#7269..7464#6027..7145#5178..5738#1..123#atgatcaggcggggcggcaaggcgcgggggaaggtcgcggaggaggaatggccgagcctggtggatctggtgcttggctggaaactcgaggacgtcatgaacgagaacctcttcaaggacaaggttggtgccactgctccctccattggtgtgctttgatcggttttgcgcttgttacgatcgtgttgctactgttgtatactagtactaccataagaactccaataaacgactactccgtacttgctaaatcctaatgcgcatgccttgctcagcagcacttgcttccagtttccaaatgttactcgtggaatactaagttcttaaaagagatcgtggctttctttaagaagatcaatctacaaacactacaccaatttcaagttgttttggacttatgctttctaatctgacgggataacacttacccccacttaaatttagattcaagctggaagactataagtgggacctgattacttgaacttgggttggtggattcacgaaccagtctaccaagaaaattctccaaatatttcatatttaattgtaaatgcattttggtttattttatttttttatgctttaaaaatctgtttttgatgatgtagttaaaactatcctgctatctactatgtgctgacggatggcaaaaccttttttttttctcggaagcatttccttgaacatattaagctacggtaaggtgtaccactaccttaacctgctgtatcagtctcatccatagtcaccagaaatactatgagtggagaagctccaaataaatggttgagcaaggttcaggggggcgttgataggacaagcaatccactatggggataaagcaaattacaaatgccgggggagccaacaagtaaaggagggttctcttaagcaaagatcctcttagatgcagattcggttgtgtagcgcccgttccgtcgtggcgcctagcgggaaaattatctcttaaaaaccctaattgcgaaatttgtttccttgcttgttgtctagtgtccgtgccatctcaagatctcaatccccgatctatcgtcgaattcaattccgaatccaaatccttccaaatcaaatccctccgcaaaagtctagtttgcctcccccgggttcgatgggccgaatccctctcggcccatctccccctccctcccggctctctctctccatctccccctcccccgcgcgcgcgagagccgcgccctgcgcccctccgcttctcccccgctcagctccgctccgcctcgcccgcgcgccgcgcgctctagcgcgtaagccgcccgcgccgagccaagtcctccctctccgctccctcgctgccgcttcccgcgcgccgtgttcgcgtgcgcgcgcctgcgtggtccacgcccgcgtcgcgtctgcgccgcccggccccgctgccctgccgcgcccgcagccgctcggcccctgcagccagcgcgcgtgccgagccgcgccgctccttccgccgcgcctcccgttgcaagccgcgcgcgcgtgccgtggtggccgaccgcctggtcgccgccgtcgtcagcgtctgccgcgtctgtcgcccgtgtcgtcgcgccgctccaaaccgcccgccgtcatcgccgtcgtcaccgcccggcccccgccactccgcgcgcaagccgccaagggacggaggccgcgcccctcctctctctgccgcgtcgccccgctcccctcctcctttttcccgaatcggcaaaggggcaagccccctttctccccctccttttcccctttccccccctcgccggcgtcatcctccctgtcgccgctttggccgcgaccgccgagcgccagctcgcgcccttgaccgcgcaagtcggtccccaaaccgacattgccgcccatttaaaccccagcctcccctttcccttcctcttccattcgtctccgcgccattgtcaccgcccccgtgctctgtctcgtctccgccgtccttcgccgagcgccggaagagccggtgcgttcgaggacgcggaaggggacttcggccgcgccctcttcttcctcttcctcagcccgaggccggagagatcactcccgcgccgtcggcctctcgtcacagcgcccctcctcatcgcggtagtgcctccctccgttcttcctcctcgcatccatctttcccccttagactttcggtagtagctcgagtagcctccccgtagttagccggcgccaccccgaccgttgccgtcgctcaccgtgtgatcgccgccgtcgccgcccgagctccgtagcacctgcacgtcgccagcctcgctcggcgtagctccgtccaatccgacgctagcgtcgagttcccgaagccgcgtagatgctctcaccgccgggaatcgacccctcgtggcctcgtcgccgtttccctcttccctccccgccggttgtcgccgccgcgattcgccgccgtcaagctccctccggcgaatccgagccgttggctcgtctcccctcatcacgaacagccgcccggtgtgctcgcttttgcccgtatcgccgtggttcgctccgccgctcgccgccgccgcccgccgtccattcgcggccgggtcgtcgtctacctcccgccagcccacgtggcagccacgtaggcgccacgtcggcggccagctcagccgaggtcgggacgggccgacccgggtcagtccctccccggtgcgcgcgtttccaccgcgagccgtgaggctgcgcgtggtcccgccgcatccgcatccaccgcgagccgcgcgcgtgcaccgcgtccctcccccgcccgcgcgcgtgcgccgcatgctccctccgcacggtgagccgagccactgacaagcgggtcccacccgggaccgcgcgtggtgagcccggtccaccggcccccctctctcctcccctcccgcgcgcgctctgggccgggtcctcttgggccggccggcccattagctcggccgagccgcgcttcttctctcgggccacgtcctagccgcccgagggaagtctacttctcctccctctttcttttctttttcaaaaaggatttaatttaatcctttttcctttagatcaaaaatccaataatcttataaattcaatatcttcccaaccgtaaatccgtttgactccgttcaacttccaaaattcctcaaatctcgagatctttctaatggcacgcttaaaggtcattaatagggctttattttcgccgtttgttgagttgtcccgtttcgcgtgtagtttcggagcccgaagacccgcagcgcgaggatctcgaggatcaagctccagatctcgagcaaggcaagccacctttgaacatcttgagcctatatttgaaatttaattatattccttgcaaaatattatgcattgataggatcgcacttaatctgtttgtcccgtctgcaaggcagattggcggacctacctaatttgtcgcatttgatccttcctttgttaattgctatatcttgtcccctggtaaccatctagttgcgtctcgatattcgtgcaccctgtgcgagtatcgacggacgccttcaaacttaaaatctgtttaacaatttgggtaaaactggagttttacaaaagacttggaaaacccgacacctgggtcggtgcttgcgaactaaatgaatttccaaaaccgcggaccggggaacgtaccgggtgtacggtttcccgctcttgcacttaaggaccgattccttggaatttcatccaaacataagacaagtacgaccacatgggtgggatgggacacccctggctgagtaactagcttatcaggggagccttgatgccgagagacatgtggattcgccggggtggtgtcggaaaggaccccctgggcttcctggcacagtatagtctgggacctaacctgttgtcggtctgggacccctctcgtcggcatatggtaaacttgtgtcggctttggaaatgccttgtcatgaaagcttggaggtctcccgacgtggctgatccccacgggctgggtgatccgggttagtaatgtcgtgtgggtaaagtgtaccccctctgcagaggttaacaaactgttcgaacagccgtgcccacggtcatgggcggatgtgaggtgattcctagcgtagttttgtttgactactgcttgtgaaattgctattgtgaaaagaggttcgatgtttgaaaaatctgcagctgacgggatcagctgggcccgggtggccgtttgaaagttgttggcccgggtggccgtttgaaaagctgttggccgggtgccaaccttgattcatttctaaagactgatacattgcacatactccgaccggacgagacgcactgtctcatccgtgtcgtttgagaagcactcccttagttgtttctagaaaagagttcaaataaaatcaattgcaaaaacaacagcctttccttgaagcctgcaataaacacttatttcccctggcttgctgagtactcccgtactcacccttgctctatataaataatccccccctagttgctgaagaagatgaagcggatcctgctgatgaggagttcttccaggagcaagccggctacgatgagttttagggtttcggcctagttcccaagtcgcgcctgtgatgtttggtccaagtcctggcttccgtttcccttttgtaatgcagttgtgagctcgggatctgtccgtagcccaacatgactgtatctctactctataataaagagacctctgttgctgtgatattctgtctccctgtgataccagcactgtttcctgggactggtatcgattaacaggttaatttggagcgtcacgggctagttccggtcaggactagttcggggcatgacaggttggctttcggctctaaatgcgcatgctttaaagacctcttaagctttctaaatatttaaaaagtactccaatttcagcctactatacatgtgagcaacgttctacaacctatagtaatagagtcagattgttgagataggtgctgcagcctgcaggtcgtgtatttttacctagtagaatttagtgatttcaaattatcttgtttctcttaaagcacggttcttcactgcattttggaatgcattgagattctgtttcaaacaattatagtttaaccaagaatggttagtttgtctagcaactggttgcttatcaatatgaggtgtgaaaaatgcagatgaaaaggataccgtccacattcagtgatctcaagagctacttagagtcctacacctctccattgctggaggagatgcggacggagatgtcttctagcttggaagccatatccaccatgccttctaccaaaatttcgtggatcgagcaaaagaaaaacaacaaagtttacgacattgttttcgatgctgattctcagaattctaaggcatgtaaccgacctgaaagttatgttccaagtgttggtgatatcattatcctgtctgatgtgaagccggagcatatttctgacatcactcgcaatgggaggccatatattgttgcctttgtcacagaaggaggggatgaagacgacgactcacctccagttaagtatgtgatcatatcatcaggaaaaattgattctgaagatggcaagtgtcaagataggaaagagatcaaactttttgctgcctatttgctcaatattgtaacatacatccgtatatggcgctgccttgactacaacactgcagtcagaagaaatcaaagcctcatacaggagatggtacattatccactggtacgtacacactgaatggtactgatctgaagacattattatgattgatattttgtccaataatgaacatgaaagggcagtgatcaaagaagggagactattttgaaattactatatacatttttcctttttcttcaagaatatttcattgcaaaagaaaagctccaggttattgcaaaagaaacgatccgagtatattcacttcaaaaccaaactgattattgaaaggttttgggtggttgtacagaagtaggtagtttgattagttccattttctgattttcccaggttgcagacattgttcagaaacagaaaaaggatcattctatcgacagtatggagatatggagtaaactgtctacgatggatcttaacaattctcagaatgatgcgatcttgaattgtatctcatcaatgcatagcaacaacagcagtagcagttttagccttatctggggacctcctggcacaggaaagacaaaaacaatcagtgttctgttgtggttgatgagagaaatggaccatggtactctaacatgtgcacccacaaaccttgctgttaaacaagttgcttcgcgtttcttgaaggtgatcaaagagtcttcggatagagcctgcttaggagatgttctactctgtggcaataaacaacgcatgtgtgttgacggtaatctcaaagagatctatttacatgatcgtgtaaggacgctgcttggatgctttgtgccaatgactggatggagacatcgcctatcttccctatctgatctttttgagaatggttactcccagtatcagaaatatctggaagaccaaaaggaaggtgatagccttaccttttattcttacactaggaaaagatttaatgctacttatccagagcttcgaagatgtttcaaagaagtactattccatgttccaaaatccactatcttggaagtgaattacaacaatatcatttcacttctagagctgcttgaagatttcaacaagaaattcatgaacaaaaatattgaggatgaagtgaagggaattttcctgtataatgatgatcaatctgattccagtgtatccagtctgacaaaattttctaaaacagcaatcagcctcgggaaaatcagaattagatgtctcgagctactgaatatgttattaagtagcttgaaacttcctataacttcctccaaacgtaccattcgggagttctgtatggaaagcgcctccatagttttctgcactgtatctagctcttccaaaataagtaataaaaaactacagttgcttgttgttgatgaggctgctcagttaaaagaatgtgaaggattgatcccgttgcgtttgcctactttaaagcatgctattcttattggtgacgagtgccaattgccagcaactgtcaaaagcaaggttgattcttgacctatgttattactgcattgaatctattaatccagtgaacatcatattccccattcgtttcgtcagttttttatactgtactcgtatttcatttctctgtctgttttgcaggtttgtgaggatgcgtcgttcgggagaagcctcttcgagaggttgagttcactgggacatgaaaaacatctccttaatatgcaatacagaatgcacccatccattagtatctttccaaacatcagcttctatgataggaaactcttagatgctcctaatgtcaagcagaaagaacaccgaaagaagtaccttccaggtcttatgtttggtccttactctttcttcaatattgaagatggtaaggaggatcttgatgaacttggccgcagcagaaagaatgtggttgaggtttctgtcatacaggaaatattgcgaaatctccaaagaggcatgcgctctatagtcatttaatttatcaccaaaacatgtagcattttattttgttatttcttatctagcttattgtggcaaaataatatttatctagcttatttaataatcttatgatttgtcataaatctaagtatttctcatcctctgcagcccattctaaaaccaaaaataaggttacagttggtgtcatatgtccatatactgctcaagtcctagcaattcaacaaaaactcgggaaaatgaagtttgacccggtcatagtaaaaattaattctggtgatggctttcaaggtggtgaggaagacataatcactttatcaactgtgaggtccaactcagatggggctgtaggttttcttgtcaaaccggcagcgcacaaatgtgtcacttacacgagcaaggtatcttctataacttatttaaggttaaattccttttttgacccatgttttctcctttatttttatttttatccccattatcaccttatttaatcacaggtattgcctcttggattttgggtaatgcaacagccttatctaggtctggctctatctgggcagatctagttcgtgacgcgaaggatcgacagtgtttcttcaacgcaaacagtgataaggatatctcccgtgtgcttgctaagcacaaaattgagaccaataaagttaaagatagaaagagtacaccattcaaagtcagaaatagtggggtttgggtattgactcacattacactttatatatctcctctgagttgtggaattaaattttatcatttatctcatgttcattttcctgattgatgcatcattatcgtgtgctacgtatttcttgaaatatgataccatgattctactagttgcctagttgacaggaacactttgcagcattttttttgtgtgacatgccccaaaggggatggatatacagcttaactgtttgttatctgcaccaaacttgttttttccctttcaatctatctattgtcttataggatcatgaagatccattgttcaaatactatttcactggttggacatccaattctcaggcagcccacctgaacaaactgcaacaacacaagttgtgctgaactattattagtgcatccaagtatccagctatccaactcttatgtatatgtacgagtaattagtgttttgcatgcagtagttattatctgtttgtctagacagatcattcctgcagaattttaaagtgtctcaactaataataaataaatatttatgtaccagataaatcagataattattcttaaacttataattctggtgtttgttcaggttcaagtgccatcccgaagtgggatgaaagatgaaagcccttcaacttcaactggcattggtggtttccccggggatacagaagaaaatgtagaggatatcaccgtatgcttaagtaatcttaaaattcgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0582800, RefSeq:Os04g0582800