Os04g0583150

From RiceWiki
Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0583150| Description = Protein prenyltransferase domain containing protein| Version = NM_001187135.1 GI:297723400 GeneID:9271390| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0583150

Description

Protein prenyltransferase domain containing protein

Version

NM_001187135.1 GI:297723400 GeneID:9271390

Length

2256 bp

Definition

Oryza sativa Japonica Group Os04g0583150, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29854370..29856625

Sequence Coding Region

29854431..29856251

Expression

GEO Profiles:Os04g0583150

Genome Context

<gbrowseImage1> name=NC_008397:29854370..29856625 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29854370..29856625 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaatgctactcggagtggcctcctctcccccctctccatccaccgagacgaacaccatcgcagacctcgctttggacgatcaggaggcagcttgcgtcgttcgtcttgcactgctccaggtcgtgtgcttcccctcttcttgagcccaagaatttgcccgatgagttccatgctgtgtctgcctcgacgccggcgccggtgccggtgtccccgcttccggatgctccgaagctcggcatatccaacaagttcatccggggcctctgcagcgaccggcagaccgagcagctcgccttcgagtgctacaggagggctctgcaccagccggagttcctgccggacaagaagacgatgaacgccctgaccgtgcagctgctcagggctaagcagtggagctcgctggagttcctggttgaagatttcagggcctatggggtgatgccggagcggcggacgtgcgcgcggctcgtcgcgagctgcgtcaaggcgaggaagttcgggctcgccgacatggtgctcggggtcctcgaaggcaagaggggtgcacctgccgctgtcgccttcagctcggcgatgcaggcgtacaacaagctgcacatgtaccggagcacgctgctggtgtacgagcggatgagggcggctcggttgtcgcgcgacgccgacgcctaccgcgccgtgatggcggcgtgcggggcgttgggcaagccggagatggtggcttcactgctcaagcagtacaagtcccacaaatggtacccctctgaaagctgtgtcgagacatacgccatcgtctgcgacgcactcggacgagcaggtagagcctcggatgcgctgaaatgcctgcgagagatggaagcagacggcatcgcgccgaatgccacaatctactcttcgatcatcagatctttggcagatgcccatgaatcttctgcagcagaagacctgtacaacgaagcatggaagaaagggaggctgggggatccggacatgttcctgaaggtgatcgtcatgcatgttgaggccgggagagtggagaagataatgggagttgccaaggacatgagggagactggtctgagggtcaccgattgtatcctatcaaccattgtcaatggctttgtgaagaggagaggcctcaagccggctatcagagcttatgacaagctgattgctttaggatgtgagcctggccaggtcacctatgcatcagtcatcaacgtttactgccagcttgggcggagcgacagggcggaatcggtcttctcggagatgatcgatcgaggctttgacaagtgtgtggttgcatatggtaacatgatctccatgtatgggaagatcagtagagcgtcggacgcgatgaggctgcttgctgtgatgaagaagaaggggtgcgagcctaatatctgggtgtacaactccctcctggacatgcacggaagactcgggaattcgaggcaggctgagaagatctggaaggagatgatgcgccgcaagattcagcctgacaggatcagctacaccgcgatcatcaacgcgttcaaccggtcaggagaactggaccggtgcatggatttgtaccaggagttcagggagacaggaggaaaggtggacacggccctggctgggctcatggtaggggtgttctctaaatgcagccgattcaacgagctcatcgagcttctgaaggatatgcaaggcacacgactggacaggaggctgtacctgaccgtgttgaggagcctccgagacgccgggctggaggtccatgtgaagtggctccaaactaatttcagtttcgtggaagagaaaacctga</cdnaseq>

Protein Sequence

<aaseq>MAKCYSEWPPLPPLHPPRRTPSQTSLWTIRRQLASFVLHCSRSC ASPLLEPKNLPDEFHAVSASTPAPVPVSPLPDAPKLGISNKFIRGLCSDRQTEQLAFE CYRRALHQPEFLPDKKTMNALTVQLLRAKQWSSLEFLVEDFRAYGVMPERRTCARLVA SCVKARKFGLADMVLGVLEGKRGAPAAVAFSSAMQAYNKLHMYRSTLLVYERMRAARL SRDADAYRAVMAACGALGKPEMVASLLKQYKSHKWYPSESCVETYAIVCDALGRAGRA SDALKCLREMEADGIAPNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFL KVIVMHVEAGRVEKIMGVAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLI ALGCEPGQVTYASVINVYCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMISMYGKISR ASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISY TAIINAFNRSGELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSRFNELIELLKDM QGTRLDRRLYLTVLRSLRDAGLEVHVKWLQTNFSFVEEKT</aaseq>

Gene Sequence

<dnaseqindica>62..1882#aaggtgctctcaacctagacgagagaggttcttccactcccgacctctagtttccagagtgatggccaaatgctactcggagtggcctcctctcccccctctccatccaccgagacgaacaccatcgcagacctcgctttggacgatcaggaggcagcttgcgtcgttcgtcttgcactgctccaggtcgtgtgcttcccctcttcttgagcccaagaatttgcccgatgagttccatgctgtgtctgcctcgacgccggcgccggtgccggtgtccccgcttccggatgctccgaagctcggcatatccaacaagttcatccggggcctctgcagcgaccggcagaccgagcagctcgccttcgagtgctacaggagggctctgcaccagccggagttcctgccggacaagaagacgatgaacgccctgaccgtgcagctgctcagggctaagcagtggagctcgctggagttcctggttgaagatttcagggcctatggggtgatgccggagcggcggacgtgcgcgcggctcgtcgcgagctgcgtcaaggcgaggaagttcgggctcgccgacatggtgctcggggtcctcgaaggcaagaggggtgcacctgccgctgtcgccttcagctcggcgatgcaggcgtacaacaagctgcacatgtaccggagcacgctgctggtgtacgagcggatgagggcggctcggttgtcgcgcgacgccgacgcctaccgcgccgtgatggcggcgtgcggggcgttgggcaagccggagatggtggcttcactgctcaagcagtacaagtcccacaaatggtacccctctgaaagctgtgtcgagacatacgccatcgtctgcgacgcactcggacgagcaggtagagcctcggatgcgctgaaatgcctgcgagagatggaagcagacggcatcgcgccgaatgccacaatctactcttcgatcatcagatctttggcagatgcccatgaatcttctgcagcagaagacctgtacaacgaagcatggaagaaagggaggctgggggatccggacatgttcctgaaggtgatcgtcatgcatgttgaggccgggagagtggagaagataatgggagttgccaaggacatgagggagactggtctgagggtcaccgattgtatcctatcaaccattgtcaatggctttgtgaagaggagaggcctcaagccggctatcagagcttatgacaagctgattgctttaggatgtgagcctggccaggtcacctatgcatcagtcatcaacgtttactgccagcttgggcggagcgacagggcggaatcggtcttctcggagatgatcgatcgaggctttgacaagtgtgtggttgcatatggtaacatgatctccatgtatgggaagatcagtagagcgtcggacgcgatgaggctgcttgctgtgatgaagaagaaggggtgcgagcctaatatctgggtgtacaactccctcctggacatgcacggaagactcgggaattcgaggcaggctgagaagatctggaaggagatgatgcgccgcaagattcagcctgacaggatcagctacaccgcgatcatcaacgcgttcaaccggtcaggagaactggaccggtgcatggatttgtaccaggagttcagggagacaggaggaaaggtggacacggccctggctgggctcatggtaggggtgttctctaaatgcagccgattcaacgagctcatcgagcttctgaaggatatgcaaggcacacgactggacaggaggctgtacctgaccgtgttgaggagcctccgagacgccgggctggaggtccatgtgaagtggctccaaactaatttcagtttcgtggaagagaaaacctgatggatccatgagttatctgtgctgttcatcttcagcaccgaagcatcgcgacgatcgggtatctgcaaaaacattgctctgtacatcgacagaaaaaatgggtaaatatttgcttgcctcaatgcgctttgtcgaaactatatgcttatgctgctggcttccaaccgccattgtaaatgtattctgggagatacacctttgtaccagtaatgatctgattacagatttattggataagttgcattgctcagtagatctgcatttgccagatttattgaactcacttgtaatatagccctcttcggcaaatgtaacttttgcatcagtactgaactttgtacatttcttcagcgcttaacatcttttcgaatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0583150, RefSeq:Os04g0583150