Os04g0585400

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0585400| Description = Conserved hypothetical protein| Version = NM_001060213.1 GI:115460155 GeneID:4336791| Length = 3179 bp| Definition ...")
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Gene Name

Os04g0585400

Description

Conserved hypothetical protein

Version

NM_001060213.1 GI:115460155 GeneID:4336791

Length

3179 bp

Definition

Oryza sativa Japonica Group Os04g0585400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29976467..29979645

Sequence Coding Region

29977033..29977054,29977180..29977661,29977886..29978251,29979302..29979520

Expression

GEO Profiles:Os04g0585400

Genome Context

<gbrowseImage1> name=NC_008397:29976467..29979645 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29976467..29979645 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggcctccgcgcaggccctccgccgcgcgcccgcgcccgcgctccctccagcgagccgccgcggcgctcttcctcgccatcttcgtcgcgctgcccttcgccgtgctgtaccgtggccccgtgtcgcggtcgctgcacgactcgtgggagtgggacccgctgccttcgctcgacgcatccgaggaggacggcgccgcccgggatgatgatctggacagtcaagatctgaaactcgagcaagtcctgcagaaagcctcaatgggagataacacggttatattgaccactcttaattctgcatgggcttctcctggctcagtgatagacctattcattgacagttttcgatctggtgttagaacaagttcacttataaaccatcttgtcattatagcatttgattggaatgcttacaagcaatgtctcaagatccatccttattgctttgctctcggaactgatggtgtggatttctctgaggagaagaggttcttgacttctgggtatctggagatgatgtggaaaaggatagatttcttgcggctggtcctggaaagtggttttagcttcatattctcggatgcagatatcatgtggtttcgcagtccgtttccttatttttatcctgatggcgattttcagattgcttgtgaccactattttgggaatgcaactgatctgagaaacattgctaatggaggcttcaactacgtgaaatcaaatgaacgaagcatagagttttacagtttctggtattcctcacgattgagatatcctggccttcatgatcaggatgtatttaatgtcatcaagcacgacccttatgtttcagatattggactgaaaattaagtttttgagtacttcatactttggtggattttgtgaaccaagcagagatctaaacaaagtttgcaccatgcacgctaactgttgcattggactgcaaagcaaggtacctgatctaagagttatgatggaagattggaggagttatttgtccttacctccaagcttgaaaagattgagtgcattggcatggagggtgccgcaaaattgcagcctttcttggtcacaccaataa</cdnaseq>

Protein Sequence

<aaseq>MERPPRRPSAARPRPRSLQRAAAALFLAIFVALPFAVLYRGPVS RSLHDSWEWDPLPSLDASEEDGAARDDDLDSQDLKLEQVLQKASMGDNTVILTTLNSA WASPGSVIDLFIDSFRSGVRTSSLINHLVIIAFDWNAYKQCLKIHPYCFALGTDGVDF SEEKRFLTSGYLEMMWKRIDFLRLVLESGFSFIFSDADIMWFRSPFPYFYPDGDFQIA CDHYFGNATDLRNIANGGFNYVKSNERSIEFYSFWYSSRLRYPGLHDQDVFNVIKHDP YVSDIGLKIKFLSTSYFGGFCEPSRDLNKVCTMHANCCIGLQSKVPDLRVMMEDWRSY LSLPPSLKRLSALAWRVPQNCSLSWSHQ</aaseq>

Gene Sequence

<dnaseqindica>2592..2613#1985..2466#1395..1760#126..344#atactttagccattccacatcagtccgtgccgctctctgcccattctcttctccacggcaaaccaccaccggcgtcaccagcccaccaccggtctccaccgccacccttttctccgaatcccgacatggagaggcctccgcgcaggccctccgccgcgcgcccgcgcccgcgctccctccagcgagccgccgcggcgctcttcctcgccatcttcgtcgcgctgcccttcgccgtgctgtaccgtggccccgtgtcgcggtcgctgcacgactcgtgggagtgggacccgctgccttcgctcgacgcatccgaggaggacggcgccgcccgggatgatgatctggtaatcctgccccctcccttcctactgatggcgttcgtttggttcccaatttttagtgtaactgctctggaactggaatgatatccactgttaaaccatgaacgaacaacgataaattttggtagtacttctgctcaaaaaggagaaaaaaaaacattggtcctctcctcttagttttgtgaatgtcaggtagggtttaataagttcgcagtgcggtgttgttcgtggattcatttatgatcagttcatgtggttggattttgcgatctcgtgtagtgtagtctaatttagagctgttactgccaatgcgtaatgacatattgtgttcacaatacttagtagtggctgcactagagatgtgttatcttgaagggtttatcttaggatgaagcaattctatccagttgggtttagatgttatagtaaacacacacgagtaaatgcagatggtgttgttgtgttaaaagacagaagaacagtgaacacatatgtgatagccagaaccttccaatctgtttttcagtttgaacatgggaatcacttccacctagtgaaatactccctctgtttgggacggtgggagtagatgttactgacgcggtagtgtctgctctaggtgtcattgacatgtggataacttcattgaattttgtaagagaagtagattactgtttttctccaccatagtaatgtcagaaagtttggtaccttacatatttgctttgtttcagctgattattaacggatgttttcacattgaacaattgactaggttggcaattgaaaggccaacatggcttttgattgcaggactttaggaaaatttaagaaagtaataatgaccctaagtttttttattgtttatcttagctgtcaatgttacatttcagatttcattttagctgtatgtttcatgtattcattgtcccctaggccctaatagtccaaattcagaataaccatcttaatttttgaactactttttatgtgatcatttgcgcggccactttccagttaactttctccttttatttaattgtatccttctaggacagtcaagatctgaaactcgagcaagtcctgcagaaagcctcaatgggagataacacggttatattgaccactcttaattctgcatgggcttctcctggctcagtgatagacctattcattgacagttttcgatctggtgttagaacaagttcacttataaaccatcttgtcattatagcatttgattggaatgcttacaagcaatgtctcaagatccatccttattgctttgctctcggaactgatggtgtggatttctctgaggagaagaggttcttgacttctgggtatctggagatgatgtggaaaaggatagatttcttgcggctggtcctggaaagtggttttagcttcatattctcggtaaattctgttgcatgcagttcagtcaccattgataaatagttattcccattttgcaaattccaacagcaagtgattcggctttgttactaaccatgatgagattactattttcttttgttcataatatgatcgctagttgtttcaaaacaatgatgaaatggaggtgtcttttggttgtcactttcatatacttattttccatttattttgataaatttcaggatgcagatatcatgtggtttcgcagtccgtttccttatttttatcctgatggcgattttcagattgcttgtgaccactattttgggaatgcaactgatctgagaaacattgctaatggaggcttcaactacgtgaaatcaaatgaacgaagcatagagttttacagtttctggtattcctcacgattgagatatcctggccttcatgatcaggatgtatttaatgtcatcaagcacgacccttatgtttcagatattggactgaaaattaagtttttgagtacttcatactttggtggattttgtgaaccaagcagagatctaaacaaagtttgcaccatgcacgctaactgttgcattggactgcaaagcaaggtacctgatctaagagttatgatggaagattggaggagttatttgtccttacctccaagcttgaaaagattgagtgcattggcatggagggtgccgcaaaattgcaggtattagaaccaaccttgaaatccaatttagattgtttcaaatggaaaatacaattaaatgaagttcaactaaaatctttctttcacattgttttcatgttgcatctgagcattttttttggcagcctttcttggtcacaccaataaaacgtccttatggacagcaaaaagaaatgaaaatggtgaagcccgccgaaagcgctctgccttccccccgaaagaaccttcagctaaacatctaaacagtgtgacgagattctgattgaaaggtcgcggtaagttttgccaaacacttcggagatccttgacaatatagagcggagttgccggaccgctctggaaaaatacactacaaggatggagcggccttagcactgctcctcagctccgctggctgtaccgaacgggccttcagacttcagtgacaaccagcttcatttggctacgagaaaaggagtgcctgcttcttcaaggaaaactgaagcaattacaccgtcttgaaaagcaagactgctgcaatggatctgtcaagagtaaaatggaaaaaaaagaatgtatatcctggttgatttcataggtaagtttgaaaactggatgctcttttttttcctgtgttagaacaattttgttagatggatagatgtatgaaatatgaaaaaaatgaatggcctagtctcgcgattttcaaatatgaattcaagttcagctgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0585400, RefSeq:Os04g0585400