Os04g0587400

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0587400| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001060226.1 GI:115460181 GeneID:4336804| ...")
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Gene Name

Os04g0587400

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001060226.1 GI:115460181 GeneID:4336804

Length

1477 bp

Definition

Oryza sativa Japonica Group Os04g0587400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30059494..30060970

Sequence Coding Region

30059521..30059608,30059726..30060864

Expression

GEO Profiles:Os04g0587400

Genome Context

<gbrowseImage1> name=NC_008397:30059494..30060970 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30059494..30060970 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgagcactaggcccatcttgttgtttatcctttttctgaacctcacaatgagcgatgctactgaaattcagctgcagattacaggtgtccgaggccaagaagacgtggtagcagagtctgacaagagcacgtctcgagcagatggaactgcggcggcggcggcggcggcggcgccgctgccgcctgtgtccagccagcggctgcggtggtgggcggtggtccttgccaacatcgtgttcgtcctcggcgggcagagcgtggccacgctcctcggccggatttactacgaccagggcggcggcagcttgtggctggcgacggtggtgcagtcctgcggcgcgccgctcgccgtcccactgctgctctacttccggcggccagaggcctccccggtggcacgtccgccgctgctcaagatcgctgccatctacgccggccttggcgtcctcctcgccggcgacaacctgatgtactcctacgcgctcctctacctgccgctgtcgacgtactccctcgtctgcgccacccagctctgcttcaacgccgtcttctcctacttcctcaacaaggagaggttcaccgcgctcgtgctcaactccgtcgtgctgctcaccttctccgccgcgctcgtcggcgtgagccactcctcggaggagaccaacagcagcgtcccggagggcaagttcgcgctggggttcgtcctggcgctgtcggcgtcggcggcgttcgccctgatcctgtccctgatgcagctcacgttcgacacggtgctcaggagcaacgcggcacacgccgtgctggagctgcagctctggagcaacgccgccgcgtcgtgcgtgtcggtggccgggctgttcatctccggcgagtggagctccctgacggcggagatggacgggtacaagaagggcgaggtggcctacgggatgacgctggcgtggacggccatctcgtggcagctcgccacgatgggcatggtggggctcgtcgcgacggtgtcgtcgctgttcacgaacgtgatcagcacggtggggatgccgctgtcgccgatcatggcggtgatcttcctcggcgaccggatggacggtgccaaagtgatagccatgctcattggcatctggggattcttgtcctacgtttaccagcactacctcgatgacgccaagagcaagaacacagctgggtcagctgacgtcacacaaacttcagaagcaaaactctga</cdnaseq>

Protein Sequence

<aaseq>MTSTRPILLFILFLNLTMSDATEIQLQITGVRGQEDVVAESDKS TSRADGTAAAAAAAAPLPPVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGG SLWLATVVQSCGAPLAVPLLLYFRRPEASPVARPPLLKIAAIYAGLGVLLAGDNLMYS YALLYLPLSTYSLVCATQLCFNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSS EETNSSVPEGKFALGFVLALSASAAFALILSLMQLTFDTVLRSNAAHAVLELQLWSNA AASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYGMTLAWTAISWQLATMGMVGLVATV SSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAMLIGIWGFLSYVYQHYLDDAKSK NTAGSADVTQTSEAKL</aaseq>

Gene Sequence

<dnaseqindica>28..115#233..1371#agccttccgctgctgctggacgagtggatgacgagcactaggcccatcttgttgtttatcctttttctgaacctcacaatgagcgatgctactgaaattcagctgcagattacaggtctctctcggtcatgaactgccaaatcgatcacagtttcgaattgagatgtgatgtgagatcgatcgaaactagtccagtttttatactgatgagacggatgattcgtatgtgcaggtgtccgaggccaagaagacgtggtagcagagtctgacaagagcacgtctcgagcagatggaactgcggcggcggcggcggcggcggcgccgctgccgcctgtgtccagccagcggctgcggtggtgggcggtggtccttgccaacatcgtgttcgtcctcggcgggcagagcgtggccacgctcctcggccggatttactacgaccagggcggcggcagcttgtggctggcgacggtggtgcagtcctgcggcgcgccgctcgccgtcccactgctgctctacttccggcggccagaggcctccccggtggcacgtccgccgctgctcaagatcgctgccatctacgccggccttggcgtcctcctcgccggcgacaacctgatgtactcctacgcgctcctctacctgccgctgtcgacgtactccctcgtctgcgccacccagctctgcttcaacgccgtcttctcctacttcctcaacaaggagaggttcaccgcgctcgtgctcaactccgtcgtgctgctcaccttctccgccgcgctcgtcggcgtgagccactcctcggaggagaccaacagcagcgtcccggagggcaagttcgcgctggggttcgtcctggcgctgtcggcgtcggcggcgttcgccctgatcctgtccctgatgcagctcacgttcgacacggtgctcaggagcaacgcggcacacgccgtgctggagctgcagctctggagcaacgccgccgcgtcgtgcgtgtcggtggccgggctgttcatctccggcgagtggagctccctgacggcggagatggacgggtacaagaagggcgaggtggcctacgggatgacgctggcgtggacggccatctcgtggcagctcgccacgatgggcatggtggggctcgtcgcgacggtgtcgtcgctgttcacgaacgtgatcagcacggtggggatgccgctgtcgccgatcatggcggtgatcttcctcggcgaccggatggacggtgccaaagtgatagccatgctcattggcatctggggattcttgtcctacgtttaccagcactacctcgatgacgccaagagcaagaacacagctgggtcagctgacgtcacacaaacttcagaagcaaaactctgaagcctgatacgcctgatagtgatacccagagtgaattttactgtacttgatctcttttttttcacggaatcaattggaaatttggaatactggtcttatcttccct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0587400, RefSeq:Os04g0587400