Os04g0589401

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0589401| Description = Conserved hypothetical protein| Version = NM_001187144.1 GI:297723418 GeneID:9266515| Length = 2316 bp| Definition ...")
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Gene Name

Os04g0589401

Description

Conserved hypothetical protein

Version

NM_001187144.1 GI:297723418 GeneID:9266515

Length

2316 bp

Definition

Oryza sativa Japonica Group Os04g0589401, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30193550..30195865

Sequence Coding Region

30193617..30195749

Expression

GEO Profiles:Os04g0589401

Genome Context

<gbrowseImage1> name=NC_008397:30193550..30195865 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30193550..30195865 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggacggccttgctgctcgcggcgctcgtggccgcgtgcgtcgcgcacggcggcggcgccgatcagtcgaccccggcgcggcggtcgctcacgttcgacagcatcttcccgggcggcccgcacaccgactcgggcatctgctgggagtctctgctgacgctgggccgctgcaagcacgacctgctcgccgccttcttcacggggtgccccattccgcgcgcgtgccgcctcgcggcgtgcgaggccgacgagcactgcgggcccttcacccgcaccttcgtcgcctcgctcctcccgcatggcctgctgcggcattgcgccggcgtcgcggcgacctccagggcgccaccacggtcgtcgtcagtccccgctggtgctcaagccagcccgaggcctcccaccagcagcggtggcgcgtgcgcgccatcggttcccagtccaacaccaccgccgcaggcaccaacagctgaaacgagcgtgcgctctcctccaccgtccgatcccagattctcccttggtccaccaaagacatttcccagtccaacaccaccgccgtcggcgccaacggctgaaatgagtgtgcgatctcctccaccgcccgctccgagattctcgcttggtccaccgaagacttttcccagtccaacaccaccaccaccgtcgccaatggctgaaacgagtgtgcaatctcctcctccgcccgctcctagattctcccttggtccaccgaagacctttcccagtccaacaccgccgccgccaacaccaacggctgaaacgagcatccgctcttctccaccgcccgctcctagattctcccttagtccaccaaagacctttcctggtccaacaccaccaccgccagcatcagtggctgaaacgagcgagctctctcctccaccgcccgttcctagattctcccttggtccaccgaagacctttccccgtcgaacacctccgccgctggcgccagtggctgaaacgagcgtgcgctctcctccaccgtctgctccgagattctcccttggtccaccaaagacttttccccgtataacacctccgccgccggcaccaatggctgaaacgagcgagcaccctcctccaccgcccgttcccagattctcccttggtccaccgaagacctttccccgtcgaacacctccgccgccggcagcagtggctgaaacgagcgagctctctcctccaccgcccgttcctagattctcccttggtccaccgaagaccgttccccgtcgaacacctccgccgccggcgccagtggctgaaacgagcgagctctctcctccaccgtccgttccaccgaagacctttccccgtcgaacacctccaccgcagacaccgatgtctgaaacgagcgtgcgctctcctccaccgcctgctcccagattttcccttggttcaccaaagacctttccccgtcgaacaccaccgccgccggcgccagtggttgaaacaagcgtgcgactccctccaccggaacatccgacagcttcttccagtggcacgaacacgccgccgccggacgcatacacaagtgtaagatcgccgccgccacgcacaccaaagatctccggtggcacgcacacgcccccggacgcaaacacgagtgtccgttcgccgccgccaccacaggacacaccaccgagagtttccggtggcaagcacacaccgccggacgcatacgccagtgtacgtgtgccaccaccttccacgccaagagtttccggcggtggaacgcaggcgccgccggaggaggacacgccgagagcttccggtggcaggcacaagagcccagatgaaccaccgtcgccgacggtttccggtaacatgaccggtcgtccaccaccaccaccgccgtcgccgacgttttccggtaacatgactggtcgtccaccaccaccatgttctccgacggccgtgtccagtggctccccggcagtgcctgcgtatgacggtgcagccggccgtgtgggtgggtcgacgggacccaacccgaaggttattcggagtggaggctcaccgcccgtggcagctgcggagtcgccgccgagcagctcgcggacggcgagcccgagcccggattttccgtacggcgctggttctgactag</cdnaseq>

Protein Sequence

<aaseq>MRTALLLAALVAACVAHGGGADQSTPARRSLTFDSIFPGGPHTD SGICWESLLTLGRCKHDLLAAFFTGCPIPRACRLAACEADEHCGPFTRTFVASLLPHG LLRHCAGVAATSRAPPRSSSVPAGAQASPRPPTSSGGACAPSVPSPTPPPQAPTAETS VRSPPPSDPRFSLGPPKTFPSPTPPPSAPTAEMSVRSPPPPAPRFSLGPPKTFPSPTP PPPSPMAETSVQSPPPPAPRFSLGPPKTFPSPTPPPPTPTAETSIRSSPPPAPRFSLS PPKTFPGPTPPPPASVAETSELSPPPPVPRFSLGPPKTFPRRTPPPLAPVAETSVRSP PPSAPRFSLGPPKTFPRITPPPPAPMAETSEHPPPPPVPRFSLGPPKTFPRRTPPPPA AVAETSELSPPPPVPRFSLGPPKTVPRRTPPPPAPVAETSELSPPPSVPPKTFPRRTP PPQTPMSETSVRSPPPPAPRFSLGSPKTFPRRTPPPPAPVVETSVRLPPPEHPTASSS GTNTPPPDAYTSVRSPPPRTPKISGGTHTPPDANTSVRSPPPPQDTPPRVSGGKHTPP DAYASVRVPPPSTPRVSGGGTQAPPEEDTPRASGGRHKSPDEPPSPTVSGNMTGRPPP PPPSPTFSGNMTGRPPPPCSPTAVSSGSPAVPAYDGAAGRVGGSTGPNPKVIRSGGSP PVAAAESPPSSSRTASPSPDFPYGAGSD</aaseq>

Gene Sequence

<dnaseqindica>68..2200#gctccaaagtgaagcacaaaacacaacaggtgcagccaaagagagctgcggttttgcgaggccaaccatgaggacggccttgctgctcgcggcgctcgtggccgcgtgcgtcgcgcacggcggcggcgccgatcagtcgaccccggcgcggcggtcgctcacgttcgacagcatcttcccgggcggcccgcacaccgactcgggcatctgctgggagtctctgctgacgctgggccgctgcaagcacgacctgctcgccgccttcttcacggggtgccccattccgcgcgcgtgccgcctcgcggcgtgcgaggccgacgagcactgcgggcccttcacccgcaccttcgtcgcctcgctcctcccgcatggcctgctgcggcattgcgccggcgtcgcggcgacctccagggcgccaccacggtcgtcgtcagtccccgctggtgctcaagccagcccgaggcctcccaccagcagcggtggcgcgtgcgcgccatcggttcccagtccaacaccaccgccgcaggcaccaacagctgaaacgagcgtgcgctctcctccaccgtccgatcccagattctcccttggtccaccaaagacatttcccagtccaacaccaccgccgtcggcgccaacggctgaaatgagtgtgcgatctcctccaccgcccgctccgagattctcgcttggtccaccgaagacttttcccagtccaacaccaccaccaccgtcgccaatggctgaaacgagtgtgcaatctcctcctccgcccgctcctagattctcccttggtccaccgaagacctttcccagtccaacaccgccgccgccaacaccaacggctgaaacgagcatccgctcttctccaccgcccgctcctagattctcccttagtccaccaaagacctttcctggtccaacaccaccaccgccagcatcagtggctgaaacgagcgagctctctcctccaccgcccgttcctagattctcccttggtccaccgaagacctttccccgtcgaacacctccgccgctggcgccagtggctgaaacgagcgtgcgctctcctccaccgtctgctccgagattctcccttggtccaccaaagacttttccccgtataacacctccgccgccggcaccaatggctgaaacgagcgagcaccctcctccaccgcccgttcccagattctcccttggtccaccgaagacctttccccgtcgaacacctccgccgccggcagcagtggctgaaacgagcgagctctctcctccaccgcccgttcctagattctcccttggtccaccgaagaccgttccccgtcgaacacctccgccgccggcgccagtggctgaaacgagcgagctctctcctccaccgtccgttccaccgaagacctttccccgtcgaacacctccaccgcagacaccgatgtctgaaacgagcgtgcgctctcctccaccgcctgctcccagattttcccttggttcaccaaagacctttccccgtcgaacaccaccgccgccggcgccagtggttgaaacaagcgtgcgactccctccaccggaacatccgacagcttcttccagtggcacgaacacgccgccgccggacgcatacacaagtgtaagatcgccgccgccacgcacaccaaagatctccggtggcacgcacacgcccccggacgcaaacacgagtgtccgttcgccgccgccaccacaggacacaccaccgagagtttccggtggcaagcacacaccgccggacgcatacgccagtgtacgtgtgccaccaccttccacgccaagagtttccggcggtggaacgcaggcgccgccggaggaggacacgccgagagcttccggtggcaggcacaagagcccagatgaaccaccgtcgccgacggtttccggtaacatgaccggtcgtccaccaccaccaccgccgtcgccgacgttttccggtaacatgactggtcgtccaccaccaccatgttctccgacggccgtgtccagtggctccccggcagtgcctgcgtatgacggtgcagccggccgtgtgggtgggtcgacgggacccaacccgaaggttattcggagtggaggctcaccgcccgtggcagctgcggagtcgccgccgagcagctcgcggacggcgagcccgagcccggattttccgtacggcgctggttctgactagcttcttcctcgccggccgggcggcagcggcagttggcgacgctgcttctctgatcgtgtttttcagttcgcttttcaagtgtaatccatgcttaataaatgaggggaacgtttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0589401, RefSeq:Os04g0589401