Os04g0594000

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0594000| Description = RWD domain containing protein| Version = NM_001060260.1 GI:115460249 GeneID:4336840| Length = 3403 bp| Definition =...")
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Gene Name

Os04g0594000

Description

RWD domain containing protein

Version

NM_001060260.1 GI:115460249 GeneID:4336840

Length

3403 bp

Definition

Oryza sativa Japonica Group Os04g0594000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30421280..30424682

Sequence Coding Region

30421434..30421559,30421662..30421803,30421930..30422129,30422429..30422814,30423086..30423635
,30423718..30423792

Expression

GEO Profiles:Os04g0594000

Genome Context

<gbrowseImage1> name=NC_008397:30421280..30424682 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30421280..30424682 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggctttggaggcgatatatacgtgatgatctggcttgtattccggaaacgaaaggggggctccactatttcgagatttacatacattacgatttgaatgatggcgctgaagtgtgtgctaagctttcttcagctaatgagaaaaatccaaaagatggaagatgttgcgttggaatagaagggcatggtgacgaaccagaagatttttcttacacttgtaattttgagtacttgcctcctttggtcttgacatgcttgcttccactgtcctatcctagcaaagaacccccatattttacagtcactgttaagtggatggatgggcctaatgtttcgcagctctgtaagatgcttgacaccatttgggcagagttaccagggcaggaagtggtataccggtgggttgagtcgctaagaaattcttctcggtcatatctctggtttgatggaaaaataacgttaggtccagatactccaatgcagaaaggagataatcgtgcaatctcaagaagtctctccttggagtctgtaattccatccatgctcagttacagtagtaagaagcgctatcaagcatttcttgaggatctccacatgtgcatgatatgcctcagccagagcaaaggttcaaacttcatcaggcttccatgccaacacctcttttgtgtgaagtgcttggggacgttatgcaggatgcatgtcaaggaaggtagtgtgtttcagttggtatgccctgataccaagtgcaatgcttcaattccaccctatgtgttgaagagacttcttacagaagatgaatttgaacgttgggataggcttactcttgagaaagcactggactccatgtcagatgtggtttactgtccaagatgcgtgatcggttgcttggaagatgaggataataatgcacaatgtccaaaatgctcctttttcttctgctcgttttgtaaggagccatgccatcctaggaggcagtgcttgactccagaggaaaagctccagcgccggcaggcgtcagggaggatgtctgagagagaggtggcacaggaaatactgaacatcaaagcattatataatgatgtccgattatgtccaaagtgccgaatggccatcagcaaaactgcagggtgcaacaaaatggtgtgcggcaactgcggtcagttcttctgcttccgctgtggcaaggccataaagggttatgatcatttcagcgaatgtaagctctttgcgcctagagacatatcagcgtgggagagacaaatggaagagcagtatggaaatcatgtacggctttcactgcgccctgtaggcggtacaatcaggtgtccaaaatgccgtgaaagaaatttcaaggatgatgagaaatatatcttctgctgggcatgccgagccaactactgcacaatgtgcagacgtgaagtccaggacaagagggggcactttgggtcaccggaatgcgtggggcttgaagatttctag</cdnaseq>

Protein Sequence

<aaseq>WLWRRYIRDDLACIPETKGGLHYFEIYIHYDLNDGAEVCAKLSS ANEKNPKDGRCCVGIEGHGDEPEDFSYTCNFEYLPPLVLTCLLPLSYPSKEPPYFTVT VKWMDGPNVSQLCKMLDTIWAELPGQEVVYRWVESLRNSSRSYLWFDGKITLGPDTPM QKGDNRAISRSLSLESVIPSMLSYSSKKRYQAFLEDLHMCMICLSQSKGSNFIRLPCQ HLFCVKCLGTLCRMHVKEGSVFQLVCPDTKCNASIPPYVLKRLLTEDEFERWDRLTLE KALDSMSDVVYCPRCVIGCLEDEDNNAQCPKCSFFFCSFCKEPCHPRRQCLTPEEKLQ RRQASGRMSEREVAQEILNIKALYNDVRLCPKCRMAISKTAGCNKMVCGNCGQFFCFR CGKAIKGYDHFSECKLFAPRDISAWERQMEEQYGNHVRLSLRPVGGTIRCPKCRERNF KDDEKYIFCWACRANYCTMCRREVQDKRGHFGSPECVGLEDF</aaseq>

Gene Sequence

<dnaseqindica>3124..3249#2880..3021#2554..2753#1869..2254#1048..1597#891..965#caagcccccagcaaacacaaacaagcgtactacgtacgattcctcctccgacgagagagagctcgcgccatggcagcagcatccgccgtcgcctcgtcgtcgtcgtcaccggcgctggagccccaccccgacctctccccggtattctcgtcgccgtccgcggcttcctcctcctcgtcctcgtcgcgcgacgagggagcgcgcggggtctcgtgcgaggggggcggcggtgatgacgtgttcgacctggacgccccgtgggtggcggcggccgaggcggagtcgaggctggaggaggccgtgacggcggcggccgcggcgcgggttggtctctgctgcaccgaggagaaggggaaggggaagggggagaaggaggaagatgagatacgaaacaaccggcagcggcaggaggacgaggtctggtacactgatctactgatcggatcaggaaatttcaataatttgttgattttggtctgtgctttggtgaattttcttgcaatggggttgctgtattcgtagtctcgtgtgatattgagctgggaacgtttggaattgcagggttttgggcgagggttttgcacaaagttgcgatcttttttccccttcgagaggaaaaaaaatgcagtctttcgctttcaatttgaggaagcgatccagagatcattagcatataaactgcattgaggaaaaggagctggttatacgctttgcatgcgattttgtaatcatttagttctttacagaagaaaagaaatcatttttagtgggggaaccaaaggaggaattgttgtactctgtaggttttctattgaaccgataatagttacatttcatcgtaataagggtactgcttgtttactttgatgtgaccatttgttctcagctgatggctttggaggcgatatatacgtgatgatctggcttgtattccggaaacgaaaggggggctccactatttcgaggttctttgtgttggtcatcactgtcgtttctactgttcttggatggtggaattttgttttcatggtttgcttctgtgtccagatttacatacattacgatttgaatgatggcgctgaagtgtgtgctaagctttcttcagctaatgagaaaaatccaaaagatggaagatgttgcgttggaatagaagggcatggtgacgaaccagaagatttttcttacacttgtaattttgagtacttgcctcctttggtcttgacatgcttgcttccactgtcctatcctagcaaagaacccccatattttacagtcactgttaagtggatggatgggcctaatgtttcgcagctctgtaagatgcttgacaccatttgggcagagttaccagggcaggaagtggtataccggtgggttgagtcgctaagaaattcttctcggtcatatctctggtttgatggaaaaataacgttaggtccagatactccaatgcagaaaggagataatcgtgcaatctcaagaagtctctccttggagtctgtaattccatccatgctcagttacagtagtaagaagcgctatcaagcatttcttgaggatctccacatgtgcatgatatgcctcagccagagcaaaggtaagctcctacaaaacaccatccttctcacattgcaatcatacgaaccaaattcgctccatgcctttcacttgttgaatctgtgccatagctgtaacaattaactggctgaaactttcattcttcacacattaattgtaattgtgtgctaataaggcccaatgaacctgttatttcaccggtttatttctaagatttttcataggaaactgaacatgctcaatctgaagttcttttccctgtaaactaacttaagttttgaaacaattaggttcaaacttcatcaggcttccatgccaacacctcttttgtgtgaagtgcttggggacgttatgcaggatgcatgtcaaggaaggtagtgtgtttcagttggtatgccctgataccaagtgcaatgcttcaattccaccctatgtgttgaagagacttcttacagaagatgaatttgaacgttgggataggcttactcttgagaaagcactggactccatgtcagatgtggtttactgtccaagatgcgtgatcggttgcttggaagatgaggataataatgcacaatgtccaaaatgctcctttttcttctgctcgttttgtaaggagccatgccatcctaggaggcagtgcttgactccagaggaaaagctccagcgccggcaggtacaaaatgaaatatatccagtgaattcttttctatattagcagttgattgtcattctagtagtagtgatctgttaatctccgataaacatatctgatggttcatcagtaaatccttcaatgatatacaaattatgagtactcggtgagaaatctcatcaaaactatttcaagggtaccatacagaatacgcttttggcacctttgtgctacagagttattcaatgagttgcaaaatgctgacattatactctagggacatttttccttttattgacttacttgtttcatgtttgcaggcgtcagggaggatgtctgagagagaggtggcacaggaaatactgaacatcaaagcattatataatgatgtccgattatgtccaaagtgccgaatggccatcagcaaaactgcagggtgcaacaaaatggtgtgcggcaactgcggtcagttcttctgcttccgctgtggcaaggccataaagggttatgatcatttcaggtaggccatcaactgtaacttctaaaatgaagtatcccttatcttggaaacaggggaaggcatccaggatatttgagctgtatatatctatgcatgtatggtttgacaagctcttgcccattgcagcgaatgtaagctctttgcgcctagagacatatcagcgtgggagagacaaatggaagagcagtatggaaatcatgtacggctttcactgcgccctgtaggcggtacaatcaggtgtccaaaatgccgtgaaagaaatttcaaggtaaagaaacctatcttctccatctattcatgaggcatgaatgttgcagcatttggtaaatttccctgcgtatacatctaaccaatgacaatacgcatccaggatgatgagaaatatatcttctgctgggcatgccgagccaactactgcacaatgtgcagacgtgaagtccaggacaagagggggcactttgggtcaccggaatgcgtggggcttgaagatttctagcatctgatctgtgtactcctatggtcacatttttacagtttacgaagttagctgttatgtcaaatgctcaatctgacgtcgtgtgtaatcgattgatgagaaccatatactcctatctaaaagctgcaacaagagttgttgtcacctttacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0594000, RefSeq:Os04g0594000