Os08g0117000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
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References
1. Shirong Zhou;Yang Wang;Wanchang Li;Zhigang Zhao;Yulong Ren;Yong Wang;Suhai Gu;Qibing Lin;Dan Wang;Ling Jiang;Ning Su;Xin Zhang;Linglong Liu;Zhijun Cheng;Cailin Lei;Jiulin Wang;Xiuping Guo;Fuqing Wu;Hiroshi Ikehashi;Haiyang Wang;Jianmin Wan
Pollen Semi-Sterility1 Encodes a Kinesin-1–Like Protein Important for Male Meiosis, Anther Dehiscence, and Fertility in Rice The Plant Cell, 2011, 23(1): 111-129
2. Wanchang Li;Ling Jiang;Shirong Zhou;Chunming Wang;Linglong Liu;Liangming Chen;Hiroshi Ikehashi;Jianmin Wan
Fine mapping of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.) Theoretical and Applied Genetics, 2007, 114(5): 939-946
Structured Information
| Gene Name |
Os08g0117000 |
|---|---|
| Description |
Kinesin, motor region domain containing protein |
| Version |
NM_001067393.2 GI:297607893 GeneID:4344521 |
| Length |
3468 bp |
| Definition |
Oryza sativa Japonica Group Os08g0117000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:947841..951308 |
| Sequence Coding Region |
947841..947954,948312..948414,948551..948594,948834..948863,948962..949084 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:947841..951308 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:947841..951308 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcagatgccatcagtggaataaatgggactataattacttatggtcagactggagcaggaaagacatacagcatggaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtggagatatatttggaaaaagtaagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtatccatccagaatagttcagatgccttggagtgcctttctgaaggaattgccaacagagctgttggagaaacacttcaacaaggatcaacttctgatgagagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaacatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga</cdnaseq> |
| Protein Sequence |
<aaseq>MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREED VIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSIL HCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIK ESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETLQQGSTSDERVRGGKIILV DLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGIDFSGENKHQQKVNRIM CLIVTLSLRAFFKMHWLVKRFSQEFLNRRVCLNATGFCRVATQERHYCAVVPPVLQMH QKHLSRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLE ELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEEVVVASSLHSPY TPSQFHCSGSNCSKHVLQLTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAI SSLLRPFGFVPD</aaseq> |
| Gene Sequence |
<dnaseqindica>1..114#472..574#711..754#994..1023#1122..1244#1323..1348#1441..1522#1644..1685#1766..1799#1931..1958#2286..2472#2530..2724#2825..2950#3040..3468#atgtccaacgtgactgtatgtgtgcgattcagaccactgagccacaaagagaggaagactaatggtgacaaggtctgcttcaagagattggattcagaatcttttgttttcaaggtttggatactctttttcttctgccattattgtttcacagataaggcaggtatactgaatatgtaaatgaccagatgccttttctgtgagatgtgcaatttggttctagaataggactcttactcaagattactggatttgtttaatgttctcatatccatgagccattaaccttcttgagcatgtcacatagctggccctgtgtgcaaggatggaatggatagttaataaagagaggagcattcttatgtttatttagttatagatgcattctccatgctaaatccctgtgatattgttggcaagccttttgtgtttgctcatgttttgttgtttctgcaaataattttgagttaggatgagagggaagaagatgtcatattcagctttgacagggtgttttatgaagatgcagaacagtctgatgtctataacttccttgcagtgccaattgtcgcaggtttctttctgcctattcatcaagatagtcaaggcatctgcttattgcaatagtctctagttttgtcttgactgaattctcttatagtcatgaggtgccatgctttgtaccaactgtctaaattgcttggacgcagatgccatcagtggaataaatgggactataattacttatggtcaggtatgtattgctgcaaagtgcaaacgccttgttccctaactagacagttgtacacaaatgtttgatgcacagcttgcataagtaacttgcttattttgttgctactacattaccatcctcaaccctaaaatttacactgaacagtcaccatttgcagtgcacctaatacgctgttactatgtctgacatgagctacccatgtcaacactgacattttatttaacttttcctatgtgaagactggagcaggaaagacatacagcatggaggtaaagtgtacattgctgggattaatttaagggatgatgactgactgcatcacttcagctttgacttgtgtttttgtttaatttggatgttggcacaggggccgagcatcttgcattgcaataagcagaaaactggactagtccagagagttgtagatgagctttttcaatctctacaatcatcagaaagcatggctatgtggagtgtgaaattgtcgatggtaaaaattccagcctcatgttctgaatttgaacccacatcactaaatctttactcacattgatataccacttctcaggtggagatatatttggaaaaagtaaggtcagtgttgttgagaatattttcttatgcttccgctgtacagattcatatgttggaaatagagtatcaaactttattttgtcatacctcagggatcttcttgacttgtccaaggacaacctacaaatcaaagagagtaaaactcaagggatctacatttctggagcaacagaagtaagagagaagtgcttaaattgtgtccttacgttttgtttttcatttgatattctgaaacaagtatataattccattttatttttccttgatggcttgtgacatttcatcatctctgtaggtatccatccagaatagttcagatgccttggagtgcctttctgtaagttccttgtgtttttcttggaatgcctctctgtgattagataccaattagtttttgtttgtttctttaaattacaggaaggaattgccaacagagctgttggagaaacacgtatcctctatttactattttactgcttctagaacagctgtaaatattaacactatgcattttatcgtccttaatgtacatagaaatgaacctggctagtagtagaagtcactgcttatacattttttcagttcaacaaggatcaacttctgatgagaggtatgcttaatgaatcataaacatcagcaatcagtagttcagtgcaacattgcttcccgtatgtggataggtgttccttattccctttttcatattggttgcaactaattatatataaccttaaatttggtgatgcccattcctttgtgctatagactgatttagtgatttgatatccaaatgctggatttcttttggctcaaattgttaaaatctggttattcaaggaaaattgcagttacctgtattttaagtaaactgccatcctgaataaatgatgctagtctgagcaggacgtgtttctttttctctaaataaaactttcagggtgagaggagggaagattattcttgttgatttagctggttcagagaaggttgagaaaactggtgctgaaggacgagttcttgatgaggcaaagacaatcaacaaatctctctcagttctcgggaatgttgtcaatgctctaacaactggtatagacttttctggagagaataaacatcaacagaaggtcaccctcacgatttatgccttgctatatttacttgtcttatcttttcatcttcaggtaaaccgaatcatgtgccttatcgtgactctaagcttacgcgcattcttcaagatgcactggttggtgaaaagattttctcaggagtttctgaatcgtcgggtttgtctaaatgccactggtttttgcagggtggcaactcaagagcggcattactgtgctgttgttcccccagtgcttcaaatgcaccagaaagtttgtctactgttcgtttcggaacaaggcatatctcttgaacaatgcatgctggagtattacatttctacctctgcatattgtcctgattctatggcagcatctgtccaggacaaagctcataaagaccacacccaaatcaatctctcccgaagtggatagcatcaagaagcccatccctgattctcatggccaaaatgatctgcgtgaccggattctgaacaaggtttgtatagcaactaaccagagatggccaattcaggtccaatttttgatcacttgatacctcactgaagatcaatcatttttcctcagttaaggttgagcctgaaggaggaagatgtggaccttctggaggaactgttcgtgcaggaaggcatcatcttcgaccccaactactccgtggcagacatcgactcagcctgccaagacgccgcgagccaggaggtctcactgctcacacaagctgtggaggaactgaaagaaaccgtcgaagaggtagtagtagcatcaagcctccatagtccatatactccctcccagtttcattgttcaggcagtaactgtagcaaacatgttttgcagctcaccgatgagaacgagaggttgaggggtgaactcgagctcgcgcaggaggctgccgccgccgccgctgctgctcgggctgacggcgcgctgcttggtttcgtgccggcggtcgccatcagctccctcctccgcccctttgggttcgttccagactga</dnaseqindica> |
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