Os04g0595200

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0595200| Description = Similar to UPF0195 protein CG30152| Version = NM_001060267.1 GI:115460263 GeneID:4336847| Length = 3089 bp| Definit...")
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Gene Name

Os04g0595200

Description

Similar to UPF0195 protein CG30152

Version

NM_001060267.1 GI:115460263 GeneID:4336847

Length

3089 bp

Definition

Oryza sativa Japonica Group Os04g0595200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30479602..30482690

Sequence Coding Region

30479991..30480091,30480184..30480229,30481105..30481204,30481290..30481393,30481515..30481640

Expression

GEO Profiles:Os04g0595200

Genome Context

<gbrowseImage1> name=NC_008397:30479602..30482690 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30479602..30482690 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgtggggttaataaatgctaaccctgtagtttatgagaaaaaagagaggcgttctcggcaggcaccagaaaccacagatgaaaatgcggcagaggctattgaccagctagaaatatttgatcatattagagacataaaggatccagagcacccatactcactcgaagagcttaatgttgtaactgaggattcagttgaaatcaatgatgaacttagtcatgtcagggttacttttaccccaacagtggagcgttgcagtatggcgaccgtcattggactttgcctgcgtgtgaaacttatgcggagtcttccccctcgatacaaggtggacataagggtggcgcctggatcacatgcaactgaaactgcagtgaacaagcaactgaacgacaaagaacgtgttgcagctgctctggaaaatccaaaccttctggacattgttgaggagtgcttgtcaccaacgtttgcttga</cdnaseq>

Protein Sequence

<aaseq>MVVGLINANPVVYEKKERRSRQAPETTDENAAEAIDQLEIFDHI RDIKDPEHPYSLEELNVVTEDSVEINDELSHVRVTFTPTVERCSMATVIGLCLRVKLM RSLPPRYKVDIRVAPGSHATETAVNKQLNDKERVAAALENPNLLDIVEECLSPTFA</aaseq>

Gene Sequence

<dnaseqindica>2600..2700#2462..2507#1487..1586#1298..1401#1051..1176#aagcagacgagcccacggccgccgacgccgcccgccgccggacttcgccggtgagcttttcttctcttccgagctccccccttcctgcccgcttcctgtggttggagttggaggggggggggggagttatctcatctgcagtgtttgctcctccctgccctagccgatcgatctccccgtccccaatctcctcgcgggctcggctcgccggccggcggcgctgatctccatccgcgcgagcagcgtctccggcgtcctgccgcatcctctccggtgcatggtctggttcgatttagtctcctccggcggcccgtcttctccgcctgttcgttcgttcggcccccaaatcccaggccgcctcctccgctggcggcgcgaggcaacgcttcccggcgacctcgggcggcgtccccttctccccgatggtcttcgcctcgcgcgacgacgaggcctgctctccggtggcctctgcctcgcgcagctccgccgcttcctgcgcgacggttgctatactccttactatcgcgacgtttgctgcgggttctgtttgatttggggcgacactgtcaatgcgcttagcttctcttgcaatacggaagcgttactccttgcctttgccttaacctagcaaatttccgaaagaatttggggttcagctgaacctccatgccccatgttagatcagtccttgcagtctttagtgatttaaccatatggcgaccgcttcagagtttagcctgctaaatattctttagcaaatttcttatcacacctttattttgcatttctgtttagcaatctgtgctatcatcggggtgttgagcgatcaaattacatttcatagtttaacgagcacaatttagtattgattgttaacagttcacaataatagtactagactactagtgatagattgggcggggaatatcttcattggatgtttatcgtgattaacaaaattattgaagactgatattggtataatttccatgttttcaacttgcaggaatttcgccattctgatataaattagtgcattgcatcagaaaaatggttgtggggttaataaatgctaaccctgtagtttatgagaaaaaagagaggcgttctcggcaggcaccagaaaccacagatgaaaatgcggcagaggctattgaccagctagaaatatttgatatcctttctttgtttccttatctacatgctgtgtacctctctttcctgttatacttacctctatctggagttctgctgccctcaatttttcttttgtttgcactccttaaccttcttacatcatattagagacataaaggatccagagcacccatactcactcgaagagcttaatgttgtaactgaggattcagttgaaatcaatgatgaacttagtcatgtcaggtaagtttacgtctctctatcattgtatgctacaatgggttgttaatgaaattcagtcacaacaattcactgttattctcttcagggttacttttaccccaacagtggagcgttgcagtatggcgaccgtcattggactttgcctgcgtgtgaaacttatgcggagtcttccccctcgatacaaggtatgatacatggagcatctctatggtagcttgcaatcgtaagaagtctgaatgagcccttaatatattgcctgacatatacaatttagaaagtcctatagtactgtgacagacatgtaatttaggtaacaactattttccctttaccttaaaaaatatttcacatgctcttcatttattttgctccatggtacttttcagaactcatttaggcatatgcctgaatgtatacctcaaaatatctgcagaataagtttctaattgtgcagaaacctgtgttgtatgtgaaacttaatcattatggttaggaacacagataggttgtgaagataccatccaaggcatttcatgatcgagctggagactgatacctagtgattcagtcttgcacattccatgaacaaatcgaagactactcctttttttggtgaattgcagtttgggccactttttattaccatggattcactttagaccaccctttgatcatcattttcactttgggctaggtattttcacctttgttgcaatttggactaccctaaaccacttcttcagcacatcaattccagcccaccggtgaactcctccacctctttgcagattcatatctttgctggaggagaggccagacatggctagggaagagagttgaggtggtccaaagtgcaacaaagtaaaaaatacctggtccaaagtaaaagattagacaaagagtggtccaaagtgaaattttggcaataaaagatggtccaaagtacaattctctctttttttagttcattaacatgacgaggaaattatgtcttcctgctgtttactattcatatttcttcagaaatttttggcagcttagtcatttataatttgtgcaggtggacataagggtggcgcctggatcacatgcaactgaaactgcaggtacatatgttttagaggctacagtttatgctttcacttaccacattctcttgcttggctcagtatctcattgtattgtccctttcttgtagtgaacaagcaactgaacgacaaagaacgtgttgcagctgctctggaaaatccaaaccttctggacattgttgaggagtgcttgtcaccaacgtttgcttgagacctgaatacaagtatacaactgggagcctgtgtgttgaaatgtttcaaaactacactgaattaccctacgacgtgtagcatgaccttgtcatttgagataccttatgtggtgcagggcgtgtgcatgaattttgatggtctgtacctttctataaggatactactgctctaccgtttcataccttttttctttttatggcctgtgacctgccagagcataattgaaacgatataaggaaatactcgtatatgaagtatattgcgctgtaggctttttacctctcgaatatgaagtactgtctggatgtcaatatccatgaaaagaaactgaaggatattccatgattttatgccatctctgtaattatatcaggttgctcttgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0595200, RefSeq:Os04g0595200