Os04g0598600

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0598600| Description = Protein kinase-like domain containing protein| Version = NM_001060278.2 GI:297603291 GeneID:4336860| Length = 6392 b...")
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Gene Name

Os04g0598600

Description

Protein kinase-like domain containing protein

Version

NM_001060278.2 GI:297603291 GeneID:4336860

Length

6392 bp

Definition

Oryza sativa Japonica Group Os04g0598600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30592358..30598749

Sequence Coding Region

30592358..30592426,30594652..30595771,30595997..30596106,30596641..30596667,30596923..30597028
,30597539..30598215,30598429..30598749

Expression

GEO Profiles:Os04g0598600

Genome Context

<gbrowseImage1> name=NC_008397:30592358..30598749 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30592358..30598749 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctgtgcagtgctggtgcatggttgcttcatgccctcatcacattcacatcacagtctgttcatcttctctcggcgctcgtctatgctgtatgcaccaccgagaaggagaacagcaagcaaaggcgcgacgacatgccgtgcagaagagcaagcacaccggccgctgcagctgcagctgatcctgctgtggctgcatggcctctcaccccactggtgctggcgctcgccgtcttctcggcgatgcctcacgtcacgctctcccggggacgggagaatcagtggccgcctctagagggaaactcgcagctgacgacgacgaagaacctgtcgtgcgacgaagtcccttatcccttcggcttaaaaggcaaatctgcccctggcttcagggtaacatgccggaaaaacgacagtgctgccatgctccgcattggccatcaaaaatttcgaatcgatcaggtgtcttcgcaggaaggtttcgtcgtcatatttgcaggccccatctaccggttgtgctacgatcgcaacggccggccggtcgtggggagcaccggaatcgggccgacgaatttgacggacacgccgttcttcttctccaagcgcaacacgctcgtcgccaccggctgttactccaactttactgctaccttcaccagctcgctacaccatcatggttggtctactaacggaagctgcacaaccaacggcagagtaaactctgacggattgtgccccgggacggcctgctgcgacgcctacggcatgccgttggacgacgcgcaggaggtcaccttcgagttcaacaagacatcggcgagcgtggccggcacctgcagcgcagccttcatcctctaccaaaaagagcagatcttcaaagtcagcggtaacagcaagccaatgcatctccaccaagaagagcacatcttcagagccggcggcggtgacagcaagccagtgcatctggaagacgttctggtgcctttgggtgagcgaaggatggtcttggactgggtgattgggcgcgccacctgtgagcaagcccggaacaacagcttcaagacacagtaccgctgcaacaacgagagctcatgcatggacaggttcatgggagagggctacgtgtgcagatgcaaagcagggtacgaccaacacaacgggaatccatacgaggcaggcggctgccaagcgtactctgtcataacactcccggaggatatacttgctcttgccccaataataagactggtgatggctacaggacagggacagggtgcattgactcccatcggccacctggcgcccctacccacaaccaaccgcaaggatgagcaaggagttacttcgtgtgtttgcccgaaaggcatgatcggcgatggccagaagaatgggagtggctgcaaaaagcagtttcctttatataccgctttgggtgtagctcttgcacttacggccacgctagctacagtgttgttgtgctactacttgacaatgaagaaaagaaaggtggaaagaaacagagctgagttattcaggaagaatggaggattgctactgcagcaaagattttcgatgatgacatctcaaggtgaggattcatcagcgaagatatttagtgcggaagaactcaaggatgccactgacaactatagtgagagtcggatccttggtcgaggcggaagtgggatggtttacaagggtatccttccaaataataccacggttgccataaagaagtccatcttgtttgatgaaagccaggtggagcaatttgccaatgagattaccatcttatcgcagattgatcacccaaatgttgtcaagcttttgggttgctgtctagagacaaacgttccgttgttggtttacgagttcatacctaatggaacactcttccagcacatccacaacaggagttctttaagatgggaagattgcttaaggatagctgaagaaacagccgaagcacttgactatctgcactctacatcttctacaccaatcattcacagagacatcaaatcaagcaacatacttttggatgagaacttgatggctaaaatatcagactttggtgcatcaagatcagtcccatttgatcaaactcatgagatagagccacacattttggcagaagcaggtgaagagcagatacatgctgttgcccagctctcagtcagatgcttaaatttgaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagaagcaatgaatcaatacagataactaatggacaagacagtgtacatagtgaggcaagaccaattcccagcttgcagtcttcaggggaaattaccactgagtacagcttgccagctgaaatactgccttcttcttacttggcaagatga</cdnaseq>

Protein Sequence

<aaseq>MDLCSAGAWLLHALITFTSQSVHLLSALVYAVCTTEKENSKQRR DDMPCRRASTPAAAAAADPAVAAWPLTPLVLALAVFSAMPHVTLSRGRENQWPPLEGN SQLTTTKNLSCDEVPYPFGLKGKSAPGFRVTCRKNDSAAMLRIGHQKFRIDQVSSQEG FVVIFAGPIYRLCYDRNGRPVVGSTGIGPTNLTDTPFFFSKRNTLVATGCYSNFTATF TSSLHHHGWSTNGSCTTNGRVNSDGLCPGTACCDAYGMPLDDAQEVTFEFNKTSASVA GTCSAAFILYQKEQIFKVSGNSKPMHLHQEEHIFRAGGGDSKPVHLEDVLVPLGERRM VLDWVIGRATCEQARNNSFKTQYRCNNESSCMDRFMGEGYVCRCKAGYDQHNGNPYEA GGCQAYSVITLPEDILALAPIIRLVMATGQGQGALTPIGHLAPLPTTNRKDEQGVTSC VCPKGMIGDGQKNGSGCKKQFPLYTALGVALALTATLATVLLCYYLTMKKRKVERNRA ELFRKNGGLLLQQRFSMMTSQGEDSSAKIFSAEELKDATDNYSESRILGRGGSGMVYK GILPNNTTVAIKKSILFDESQVEQFANEITILSQIDHPNVVKLLGCCLETNVPLLVYE FIPNGTLFQHIHNRSSLRWEDCLRIAEETAEALDYLHSTSSTPIIHRDIKSSNILLDE NLMAKISDFGASRSVPFDQTHEIEPHILAEAGEEQIHAVAQLSVRCLNLKGEERPVMR EVASVLHGLRESFDEEQIIRRSNESIQITNGQDSVHSEARPIPSLQSSGEITTEYSLP AEILPSSYLAR</aaseq>

Gene Sequence

<dnaseqindica>1..69#2295..3414#3640..3749#4284..4310#4566..4671#5182..5858#6072..6392#atggatctgtgcagtgctggtgcatggttgcttcatgccctcatcacattcacatcacagtctgttcatgtttcactaaacaattaatgatcccccggagaaaaaaaggcactttaacgagacgacgacgacgactacaaagtgaaagattcgaaaggatcgtgcaatatttactcctatacgctacaatacagtgtcctcgggtcgtcgcatggtcactaagctaagagatagcggtcgtcgtatggagctctagtggaaaacgacccgcgtatactgaagagagcgacctcaaattgtttccaactttaagtgccatattgtttatcagtttttgcctgttagtctgggtagtggtgttctcgtgcattcatccttgcgcattgagcaattgatctgtagctttatctagattcttcacaccctcctattattgagtgggatggttgtgattggttgatagaaagatgtaagtgaagaaatagcttcattttaaaacaaagtaccatgctaaaataattatattttgagacagagatatactacttatttctcgaaatgtagcaacttttagctatatatttatgtcagaagttattatggctttggaaccgatgtaggccccattttatttagatcaagacaccaattttaccttgattttttatatcatgtttttaaactgctaaatgatgtattttgcacgaaaactttcttttagataaattcatttttaagtttcaaataattaaaactcaattaattactccctccatcctacgaagactcattttttagtttttgatataacatttgactcatcgtcttatttaaaaattttctatgattagtgtttttctcgttactagataaaacatgaatactccctcatttttagattttgacacagtcttcaagatgctacttgatcaataatatctataaaagtaaaatgttttaaataaaaagaattgcacatgatagttgtttaatgataattctagtaacaatcaattttacatgatcgatctttttttctactaatagtcaaaattaaaaatgtttgacttgacactattctaaaaattattatattttttgtacggaggatctagtactttatgtgtggttaattttttttaaaaaaattttcataaatttttcagataagacggatggatatactagcttcattattttcaatataaatgaacaccactgtagtatatgctctctccatttcaaaatagaaggcaactgaggctcttataaccactgggttacagtccctttcgcattatcatcttattgttagaatcatcctaataaatacaatgcatgtgtccaatagaattagaaattctaagagtgaagaatttaaataataataaggaataagtctacataaccccaccaactatcacagcgtgactacttaaccccctcaactatcaaaccatgtatcagacccctcatctttctaataccgtttaattaaccccctgaggtagttttgccaggtggtgtgctgagttggacaagcttcttgtgttatagcaggctgacatgtgggacatgcatgattttgtgacactcaaatgacctgaaacacttatgcttaaattctgaatgttatggcgttatttccgctagcacctgttgcttaaattctgaatgttatggcgcgctagcacctgttgctttgaattgtacactgaaatagcttttcatgatgtagcagccaattatgtttgtttcggtggaaatgaatagttcaaattatgatctaatttgtgtttgcattatgattatgtgcatgctgtcatatacttttagtgttgattttttttaagccgattcaatgtccagagtttaatcctctcacttacaagccggtctacatgtcagcctgctctaacacaggaagcttgtccagtttaacacgccaccgtggcaaaaccaccctccaaaaccaccttagggggttaattaaacaatatttaaaagatgagggggtctaatacatggtttaatagttgagggggttaagtagttatccggtgataagtaattttaaggatgctagttaattgcatatatgtcttgtattatagaacatctgaaaaaaattggggggagtaaaagttttttcagtctcatgagaatacatagaagttccaggttaatctgagaaacaattaaaaatttaaaaccaacatgtagccagtagccacaagagaattagcacgctttcggcgacaatgaccccttcacagttcacactcccaacatagcttctctcggcgctcgtctatgctgtatgcaccaccgagaaggagaacagcaagcaaaggcgcgacgacatgccgtgcagaagagcaagcacaccggccgctgcagctgcagctgatcctgctgtggctgcatggcctctcaccccactggtgctggcgctcgccgtcttctcggcgatgcctcacgtcacgctctcccggggacgggagaatcagtggccgcctctagagggaaactcgcagctgacgacgacgaagaacctgtcgtgcgacgaagtcccttatcccttcggcttaaaaggcaaatctgcccctggcttcagggtaacatgccggaaaaacgacagtgctgccatgctccgcattggccatcaaaaatttcgaatcgatcaggtgtcttcgcaggaaggtttcgtcgtcatatttgcaggccccatctaccggttgtgctacgatcgcaacggccggccggtcgtggggagcaccggaatcgggccgacgaatttgacggacacgccgttcttcttctccaagcgcaacacgctcgtcgccaccggctgttactccaactttactgctaccttcaccagctcgctacaccatcatggttggtctactaacggaagctgcacaaccaacggcagagtaaactctgacggattgtgccccgggacggcctgctgcgacgcctacggcatgccgttggacgacgcgcaggaggtcaccttcgagttcaacaagacatcggcgagcgtggccggcacctgcagcgcagccttcatcctctaccaaaaagagcagatcttcaaagtcagcggtaacagcaagccaatgcatctccaccaagaagagcacatcttcagagccggcggcggtgacagcaagccagtgcatctggaagacgttctggtgcctttgggtgagcgaaggatggtcttggactgggtgattgggcgcgccacctgtgagcaagcccggaacaacagcttcaagacacagtaccgctgcaacaacgagagctcatgcatggacaggttcatgggagagggctacgtgtgcagatgcaaagcagggtacgaccaacacaacgggaatccatacgaggcaggcggctgccaaggtaaatagtagatacttctaaacacagtgatctaaaaaatatgcactagctagtgaaaacagtttgttatagtttctttctgtttgtatcatggcagaattcaattaccatagaacttagctaactgctatgaatagaactgtatttttctgctttctcaatgtggcttcacactatttatgaagatatcaacgaatgccggtctctcatttacaacaactgtagcgtactctgtcataacactcccggaggatatacttgctcttgccccaataataagactggtgatggctacaggacagggacagggtgcattgactcccatcggccacctggtaaatacatgccatatattttttccgactgcttttgtttaagataatgggatatttttttagattgcatataatcctacttattctagaatttctgttcaaacaaccatattaatcaccacgtgttatttctagaccaattttgagataagttggaaaactcaaaaaaaaaaaaagcttttaaacggttcttcctgggtacttttatgtttgattggatgagaaaagatgaaaggtctaaattgattctactaccaataaataccacagtaagaattttgttccttttaacgtgactatgcatgaacttaggattgcctgggtgataggagctttgttccctttttacttaaagaaatgtcaatatgaattgatatatttcttccggttgaaacgctaaaatgatattgtatgcatctcctatatatggctggattacgctgtaatatttcttctctaaaaaaattctgcaatagttactcgtaataatgcgtgatgatctgaccaagatcatatattctctctctcatgcaggcgcccctacccacaaccaaccgcaaggtatcataaaacaaagtgctttgttcaccacacagaagagcattttaagtgcagtctttctaatcaggaaattattatttgttcaatgtaccgggagaacgttcgaaatcttgtttacaacatctaataatgaaccagtagcggcctaatcatttttcatttggaaaacatctcctaattgcatgcaatttactattattaggcctagatgtgtgcagagaattgaacccttgcacgtactcaaaatcctgcaaggatgagcaaggagttacttcgtgtgtttgcccgaaaggcatgatcggcgatggccagaagaatgggagtggctgcaaaaagcagtttcctttatataccgctttgggtaaatatgctcaacacccggcattccacatcagatcattcattttctctcttttatttttaattcctctgctattaatacagttgtcaaaaatatctcccgtgcagaactgctaatctacagtatatagccgctgatgattacgtcattactaacatgaatgattgaacatcatatagatatgaccagtgtattgactgcattcatgattaatgattcagttgagctagcaaaactagattagacatagctaatgacgataaacattaaaaatgtgttaaggttgtaaaaaatacctcaatattgtttctggacgaaagaattgaagtcggagctcataaataaaccggaaccatgcacaaatcacaatttacaatctgcagacaaatagtcgttcggtcaaaggctcctaatattgattgcaattttatacttctttttacttccacaagatatcattgagaaataagactaacacaagttgtgaatattctcatccagtgtctgcaggtgtagctcttgcacttacggccacgctagctacagtgttgttgtgctactacttgacaatgaagaaaagaaaggtggaaagaaacagagctgagttattcaggaagaatggaggattgctactgcagcaaagattttcgatgatgacatctcaaggtgaggattcatcagcgaagatatttagtgcggaagaactcaaggatgccactgacaactatagtgagagtcggatccttggtcgaggcggaagtgggatggtttacaagggtatccttccaaataataccacggttgccataaagaagtccatcttgtttgatgaaagccaggtggagcaatttgccaatgagattaccatcttatcgcagattgatcacccaaatgttgtcaagcttttgggttgctgtctagagacaaacgttccgttgttggtttacgagttcatacctaatggaacactcttccagcacatccacaacaggagttctttaagatgggaagattgcttaaggatagctgaagaaacagccgaagcacttgactatctgcactctacatcttctacaccaatcattcacagagacatcaaatcaagcaacatacttttggatgagaacttgatggctaaaatatcagactttggtgcatcaagatcagtcccatttgatcaaactcatgtaacaactctaattcaaggaacaattgggtatctcgatcctgaatatttccaaagcagcaagctcacagagaagagtgacgtttacagctttggagtagttcttgcagagctattgacaaggcagaaacctatttctgcaagcaggccggaggaatcctgtaacttagccatgtatattgtgaatttatttaatgaaaggcgtctactacaggagatagagccacacattttggcagaagcaggtgaagagcagatacatgctgttgcccagctctcagtcagatgcttaaatttgaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagaagcaatgaatcaatacagataactaatggacaagacagtgtacatagtgaggcaagaccaattcccagcttgcagtcttcaggggaaattaccactgagtacagcttgccagctgaaatactgccttcttcttacttggcaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0598600, RefSeq:Os04g0598600