Os04g0598800

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0598800| Description = Similar to Wall-associated kinase-like protein| Version = NM_001060280.1 GI:115460289 GeneID:4336861| Length = 4509 ...")
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Gene Name

Os04g0598800

Description

Similar to Wall-associated kinase-like protein

Version

NM_001060280.1 GI:115460289 GeneID:4336861

Length

4509 bp

Definition

Oryza sativa Japonica Group Os04g0598800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30607649..30612157

Sequence Coding Region

30607679..30608660,30608876..30609034,30610587..30610751,30611272..30612157

Expression

GEO Profiles:Os04g0598800

Genome Context

<gbrowseImage1> name=NC_008397:30607649..30612157 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30607649..30612157 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaccacagagaagtacagttgagcataggcgacatggtgtgcaggcgagcaagcattccagccgccacagaggcggctgctgtggcttcatggcctctcggcccactggcgctcgcgctcgcgctcgccatcctctcggcgatgccccacgtcgcgctctcccagaacctgacgtgcaaggatgtcccctttcccttccgcgaggaaaggagcggagcaacctctgtccccgggttcatggtaacatgcgggcgaaacaacgaggccatgctccggatcggcgagcatatctacaaaatcgacaaggtgtcggtgccggaacacttcatcaccatacgtgcagggcccatccaacaggtgtgctacgaccgcagcaggaggccgaagcagatcaagccgatcaccagagtcgatccggctccggctccgacgagcttgcaggccacgcccttcaccttctccaggcgcaataaactcgtcgccaccggctgcaactacaggttcttcgctaacttcacgagctcgtcgggtggtggggacgggacacccacgagctgcgacacctggtgcaacgacggaagctccgacaccatcttcaacggctcatgcgccgataaggcctgctgcacgaccgagatgcagatggatggcgcgcaggaattcaacctgacgttaaagccgtcggggaatgtcgaggccagcacctgcagtgccgtcttcttcctcgacaaagacgagcaagtcttcactagcgccggtgatggccggaatatggcactgaaagaagcgctggtgccgctcggttaccgcaagatgttcttggattgggcgattccgggcaactgcgagcagaactccgcgtcacagtacccgtgtggcagcatgagcacgtgcaacgacgtgtacaacggaacgagctacatctgcagatgcaatgaagggtacgaagggaacccgtacgagcaaaacgggtgctcagatatcaacgaatgccgggatatgaataacaacaactgcagcagagatgcaacctgtacaaacactgatggaggctttacttgctcttgccccaagaacacggttggcgatggttacagggctgggacaggctgcagtattgactcccttccgccatctggtctagatgtgtgtgctcacccagaaaggaacccttgcatgtacccagagtactgcaaggatgaacaaggagtaacttcgtgtgcttgcccggaaggcagaaatggcgatggcaggaagaagggaagtggctgcaaaaggcactttcctttagatactgctttgggtgtaggtcttgcactgacggtcacgctggctacaacattgctgtgctactactggacaatgaagaaaagaaaggtggcaagaaagagagctgagttattcaggaaaaatggagggttgctactgcagcaaagatttttgatgatcacttctcaaggtgaggagtcatcagcaaagatatttagtgcagaagaacttaagaatgccactgacaattatagtgatggccgaatccttggccgaggtgcaaatggcactgtttacaaaggaatccttccgaataggactacgattgccataaagaagtctattttgtttgatgaaagccatgtggagcaatttgtcaatgagattaccatcttatcacagattgatcacccaaatgttgtcaagcttttgggatgctgtttagagacaaaagttccgttgttggtttatgagttcattcctaatggaacactcttccaacacatccacaacaagaggactttaacatgggaagattgcttaaggatagctgaagaaacagcaggtgcacttgcctatctccactctacatcttctacaccaatcattcacagagacattaaatcaagcaacatattgttggatgagaacttcgtggctaaaatagcagacttcggtgcatcaagatcagtcccatctgatcatactcatgtaacaactctaattcaaggaacaattggctaccttgatcctgaatatttccaaactagccagctcacagagaagagtgacgtctatagctttggagtagttcttgcagagctgttgacaagacaaaagcctatttctgtaggtaggccggaggagtcctgtaacttagctatgtatattgtgatcttgcttaatgaaaggcgtctact</cdnaseq>

Protein Sequence

<aaseq>MHHREVQLSIGDMVCRRASIPAATEAAAVASWPLGPLALALALA ILSAMPHVALSQNLTCKDVPFPFREERSGATSVPGFMVTCGRNNEAMLRIGEHIYKID KVSVPEHFITIRAGPIQQVCYDRSRRPKQIKPITRVDPAPAPTSLQATPFTFSRRNKL VATGCNYRFFANFTSSSGGGDGTPTSCDTWCNDGSSDTIFNGSCADKACCTTEMQMDG AQEFNLTLKPSGNVEASTCSAVFFLDKDEQVFTSAGDGRNMALKEALVPLGYRKMFLD WAIPGNCEQNSASQYPCGSMSTCNDVYNGTSYICRCNEGYEGNPYEQNGCSDINECRD MNNNNCSRDATCTNTDGGFTCSCPKNTVGDGYRAGTGCSIDSLPPSGLDVCAHPERNP CMYPEYCKDEQGVTSCACPEGRNGDGRKKGSGCKRHFPLDTALGVGLALTVTLATTLL CYYWTMKKRKVARKRAELFRKNGGLLLQQRFLMITSQGEESSAKIFSAEELKNATDNY SDGRILGRGANGTVYKGILPNRTTIAIKKSILFDESHVEQFVNEITILSQIDHPNVVK LLGCCLETKVPLLVYEFIPNGTLFQHIHNKRTLTWEDCLRIAEETAGALAYLHSTSST PIIHRDIKSSNILLDENFVAKIADFGASRSVPSDHTHVTTLIQGTIGYLDPEYFQTSQ LTEKSDVYSFGVVLAELLTRQKPISVGRPEESCNLAMYIVILLNERRLL</aaseq>

Gene Sequence

<dnaseqindica>31..1012#1228..1386#2939..3103#3624..4509#ctcgggccctatcacctctcgctcccgtgcatgcaccacagagaagtacagttgagcataggcgacatggtgtgcaggcgagcaagcattccagccgccacagaggcggctgctgtggcttcatggcctctcggcccactggcgctcgcgctcgcgctcgccatcctctcggcgatgccccacgtcgcgctctcccagaacctgacgtgcaaggatgtcccctttcccttccgcgaggaaaggagcggagcaacctctgtccccgggttcatggtaacatgcgggcgaaacaacgaggccatgctccggatcggcgagcatatctacaaaatcgacaaggtgtcggtgccggaacacttcatcaccatacgtgcagggcccatccaacaggtgtgctacgaccgcagcaggaggccgaagcagatcaagccgatcaccagagtcgatccggctccggctccgacgagcttgcaggccacgcccttcaccttctccaggcgcaataaactcgtcgccaccggctgcaactacaggttcttcgctaacttcacgagctcgtcgggtggtggggacgggacacccacgagctgcgacacctggtgcaacgacggaagctccgacaccatcttcaacggctcatgcgccgataaggcctgctgcacgaccgagatgcagatggatggcgcgcaggaattcaacctgacgttaaagccgtcggggaatgtcgaggccagcacctgcagtgccgtcttcttcctcgacaaagacgagcaagtcttcactagcgccggtgatggccggaatatggcactgaaagaagcgctggtgccgctcggttaccgcaagatgttcttggattgggcgattccgggcaactgcgagcagaactccgcgtcacagtacccgtgtggcagcatgagcacgtgcaacgacgtgtacaacggaacgagctacatctgcagatgcaatgaagggtacgaagggaacccgtacgagcaaaacgggtgctcaggtaagtactttcatcgacaacagacaggctagtacagtacgttttaaagacagatatgattagggagctcgctgttgttcattttcacttcaagaacttgtgatttagcctgtgaaaaaacagataatttgggagctcgctcgattacctgctggctatgaatagaactatgtttttttctgctttctgaatgaagcttcgcactatttatgaagatatcaacgaatgccgggatatgaataacaacaactgcagcagagatgcaacctgtacaaacactgatggaggctttacttgctcttgccccaagaacacggttggcgatggttacagggctgggacaggctgcagtattgactcccttccgccatctggtaacatgtcacgtatttttggaccgaacaaaatcctattaatcaccgttgcatcacccatcacaattctcattcgcatatatataggtactactccctccgcttttttttagtttgatataccaacatttttaacacaaaacaaacatagtactatcaaaagtgcattcaatgttagatttattaaaactaatttggtgtcgtgaatgttgctaattattttataaatttgattaaacttaagaaaaattgatcaagaaaaaaaagccagatcatcttgtaacataaaaaaaaagagtcaaggatgaaaacggaggaaataattgattcagtccccttgtgccagaagttaaaggtattaggagtatataagattagttttgaaaactgttcggttcttttgctccccttttacctaaaaatgtcaatataaaaggatatatttctttctcttgacacgctacaaagacattgtgtgcatcttctatggctggaatatagtaagttcttagctgtactatttaagtacttcaatatggctgtacgtaatatttaggacggagggagtatgttctactcctaggccttgtttggatcctccgaactattaaatagtcctctggaatcttactatttagaattattaaacgtagattaccgataaaaccgattccataacccttagatgaatctaatgatgtatattaatctatgattaacagctgattactgtagcatcattataacaaatcatggattaatatatctcgttagattcgtctcgcaaaatagtctagggttatgaaatggtttttgtcagtaatctatgtttaatactcttaaataacgagattctggagggccaaataggaccctagtaatgcgaagaatctgaccaataacagtagagcattctccctcaaaccaaccgcaaggtacgataaagcagagtgcagtttcttcacagcacagaagagtaatttaagtgcagtctttctaataaggaaagaacaaagtttccactgttcaaatttctgtttagtttaacgaatggaaacaatctattcgttaaatgaaacattaatcggaacgacttcgagatattcttttcaacaatgaaaattaagggtctgtttagatcccaccttaaaattttatatcctatcacatcgaacgtttgaacacctgcatgaagtaataaatatagactaaaaaataactaattgtaaagattgcaactactttgcgagacgaatcttttaagcctaattgctacatgatttgacaatgtggtgctacagtaaatatgtgctaataacggattaattaggtctaataaattcgtctcgcagtttactgacggatactgtaattagtttttttattagtgccaaaacaccccatgcgacaccctatataatacctgatgtgacacgccaaaactttacacccctaaatctaaacaccctctaaaccaccagcagactacatcatctttcatttggaaaaacttaattgcatgcaatttactattatatttacttattattaggtctagatgtgtgtgctcacccagaaaggaacccttgcatgtacccagagtactgcaaggatgaacaaggagtaacttcgtgtgcttgcccggaaggcagaaatggcgatggcaggaagaagggaagtggctgcaaaaggcactttcctttagatactgctttgggtaacatactcaacacccagcattcttcatcagataattcattctctcttttatttttatttctcattcctctgctattaatgcaattgatatataaaaaatatctccattgcagaactgctgatccataatatatagccgttaatgattacatcattattaacatgaatgatgaaacatcgtatagatatgaccagtgtattgactgcattcatgattaatgatacaattgagctagcaaaactagattagacatagctaatgacgataaacatgaaataatgtgttagggctgtaaaaaatacctcaatagtattgtttttgcacgaaagaattgaagtcggaactcataaataaaccggcaccatgcacaatcggtcatagaatcctaatatggctcgcacttttacattttcttttttttaaaggaaaacttttacattttcttttacttccacaagagatcggttaaggaagaaaattaacacaagttgtggatattctcatacaatgtctgcaggtgtaggtcttgcactgacggtcacgctggctacaacattgctgtgctactactggacaatgaagaaaagaaaggtggcaagaaagagagctgagttattcaggaaaaatggagggttgctactgcagcaaagatttttgatgatcacttctcaaggtgaggagtcatcagcaaagatatttagtgcagaagaacttaagaatgccactgacaattatagtgatggccgaatccttggccgaggtgcaaatggcactgtttacaaaggaatccttccgaataggactacgattgccataaagaagtctattttgtttgatgaaagccatgtggagcaatttgtcaatgagattaccatcttatcacagattgatcacccaaatgttgtcaagcttttgggatgctgtttagagacaaaagttccgttgttggtttatgagttcattcctaatggaacactcttccaacacatccacaacaagaggactttaacatgggaagattgcttaaggatagctgaagaaacagcaggtgcacttgcctatctccactctacatcttctacaccaatcattcacagagacattaaatcaagcaacatattgttggatgagaacttcgtggctaaaatagcagacttcggtgcatcaagatcagtcccatctgatcatactcatgtaacaactctaattcaaggaacaattggctaccttgatcctgaatatttccaaactagccagctcacagagaagagtgacgtctatagctttggagtagttcttgcagagctgttgacaagacaaaagcctatttctgtaggtaggccggaggagtcctgtaacttagctatgtatattgtgatcttgcttaatgaaaggcgtctact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0598800, RefSeq:Os04g0598800