Os04g0598900

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0598900| Description = Similar to Wall-associated kinase-like protein| Version = NM_001060281.1 GI:115460291 GeneID:4336862| Length = 2629 ...")
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Gene Name

Os04g0598900

Description

Similar to Wall-associated kinase-like protein

Version

NM_001060281.1 GI:115460291 GeneID:4336862

Length

2629 bp

Definition

Oryza sativa Japonica Group Os04g0598900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30613581..30616209

Sequence Coding Region

30613657..30614899,30615018..30615177,30615284..30616163

Expression

GEO Profiles:Os04g0598900

Genome Context

<gbrowseImage1> name=NC_008397:30613581..30616209 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30613581..30616209 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcctccatggtccttgcacagttgcttctcctctgcttgttatcgctttcctcgagcagttcttcccagatcagcccactcaagtgccccaatagctccgttgatatcccatttcctttcaaaattgccaccaactcaagcttaacgtcaactccaggctttgcgatatcatgtcgtcaaacaggcccaatgattttgctcggtggtaactacagcgtcctcagcatctccctgctcgagggatacgtacgtgtgactggccagaccgtatactcctcccagtgccataacaatagccagggaatcatcgacctcactgccacaaactacatgttctcccacacgcaaaacaagttcaccgccgttggctgtgatgccatggcaatgataagaaacagcagcgatgttgtcggtaacaccaacagcacggtgatgagcagatacagcggggggtgcgtgtcgttctgcgcatcaaatggaagcatcatcagcggcgaatgctccggtgtgggctgctgccagtcgtcagtgcccaaggggctcaacaagctggacttggagttcaccagcatacgggaccagctgatgccacccacgagtgccgtcggtagcggcagcacacggtgcagcaaggcgttcatcgcggagcaggactcgtatgtgttctctaggcatgacctatacaaggacttggggaatctgccgatggtgctcgactggtatatacagggtggcaactgcaaggaggcaagccgcagtcgtcaaacctacatgtgcaaggagaacagttattgctatgaggtggaagatggagctggatatcgctgcaattgctctggaggttacactggcaacccgtacattggatgtgttgatatcgacgaatgcaacgacgggaataactatccatgcacccacaagtgcatcaacatagctggtggttacaattgtacatgcccaatgggcatgacaggagatggcaagaagcaaggcattgggtgtaaaagagatacaacaatgttgtctactgtaggtggaagccttggtttgatggctgttctcattgttcttggcttttggacttactggatagtgaagaagaggaggcttgcaaagcagaaacaacgatacttcttgcaaaatggtggtttgttattgcagcagcagatattcacccaccaagcacctgcaaggatattcaccaccagtgagctcgaagatgcaacaaacaacttcagcgatgaccgtattgttggtcgaggtggatatggtacagtgtataaagggatactatctgatcaaaccattgtggctatcaagaagtcaaagcttgtggatcagagccaaatggagcaatttatcaacgagttgatagttctttcacagattgatcacaaaaatgtggtcaagatattgggctgttgtcttgagactgaagtgcccttactggtttatgaatttatatcgaatggagctctgttccaccaacttcataatacaaatttggtaccaatttcatgggagcatcgtcttaggatagcaactgaaactgcatcagctcttgcaaatcttcacttagcaagaaaggtgccaatcatccatcgtgatgtcaagtctgccaatatactgattgatgagaactacaccgcgaaggtatcagactttggcgcttcaaggctagtcccttccaatcagacacatgtaacaaccttagtccaaggaacattaggatacttggaccctgagtacttttacacaagccaactaactgacaagagcgatgtatatagcttcggtgtggttcttgttgagctattaactagacaaaaaccgatatcttatcataggcaagaggaagggataaatctagcttcacatttcacggcgcttgcccagcagaaccgactacaggagattgtggactgcgtcgtggtgaaggaagctggaatgaggcatgttaatgtggtgtcgcatttgattctgaagtgtttgaagcttaaaggggaagagaggccaaggatggtagaagtagcaattgaacttgaagcgctcagaaggttaatgaaacaacacctgtccctgaaaagtgaaaaggctttgagagagcttatggagcagcaatctgctgaagattgccaagagatgcagttgcttcaagaggagagcggccaggaaaaaatgagtaacattgagccgctgaagttgtaccacagggacagtgcctcggataaatgcatggagagcagtccacttctatcaatggacctcccatggtag</cdnaseq>

Protein Sequence

<aaseq>MVSSMVLAQLLLLCLLSLSSSSSSQISPLKCPNSSVDIPFPFKI ATNSSLTSTPGFAISCRQTGPMILLGGNYSVLSISLLEGYVRVTGQTVYSSQCHNNSQ GIIDLTATNYMFSHTQNKFTAVGCDAMAMIRNSSDVVGNTNSTVMSRYSGGCVSFCAS NGSIISGECSGVGCCQSSVPKGLNKLDLEFTSIRDQLMPPTSAVGSGSTRCSKAFIAE QDSYVFSRHDLYKDLGNLPMVLDWYIQGGNCKEASRSRQTYMCKENSYCYEVEDGAGY RCNCSGGYTGNPYIGCVDIDECNDGNNYPCTHKCINIAGGYNCTCPMGMTGDGKKQGI GCKRDTTMLSTVGGSLGLMAVLIVLGFWTYWIVKKRRLAKQKQRYFLQNGGLLLQQQI FTHQAPARIFTTSELEDATNNFSDDRIVGRGGYGTVYKGILSDQTIVAIKKSKLVDQS QMEQFINELIVLSQIDHKNVVKILGCCLETEVPLLVYEFISNGALFHQLHNTNLVPIS WEHRLRIATETASALANLHLARKVPIIHRDVKSANILIDENYTAKVSDFGASRLVPSN QTHVTTLVQGTLGYLDPEYFYTSQLTDKSDVYSFGVVLVELLTRQKPISYHRQEEGIN LASHFTALAQQNRLQEIVDCVVVKEAGMRHVNVVSHLILKCLKLKGEERPRMVEVAIE LEALRRLMKQHLSLKSEKALRELMEQQSAEDCQEMQLLQEESGQEKMSNIEPLKLYHR DSASDKCMESSPLLSMDLPW</aaseq>

Gene Sequence

<dnaseqindica>1311..2553#1033..1192#47..926#taactttgcagcaggtttagttcctcgttctgataaacaagcacacatggtttcctccatggtccttgcacagttgcttctcctctgcttgttatcgctttcctcgagcagttcttcccagatcagcccactcaagtgccccaatagctccgttgatatcccatttcctttcaaaattgccaccaactcaagcttaacgtcaactccaggctttgcgatatcatgtcgtcaaacaggcccaatgattttgctcggtggtaactacagcgtcctcagcatctccctgctcgagggatacgtacgtgtgactggccagaccgtatactcctcccagtgccataacaatagccagggaatcatcgacctcactgccacaaactacatgttctcccacacgcaaaacaagttcaccgccgttggctgtgatgccatggcaatgataagaaacagcagcgatgttgtcggtaacaccaacagcacggtgatgagcagatacagcggggggtgcgtgtcgttctgcgcatcaaatggaagcatcatcagcggcgaatgctccggtgtgggctgctgccagtcgtcagtgcccaaggggctcaacaagctggacttggagttcaccagcatacgggaccagctgatgccacccacgagtgccgtcggtagcggcagcacacggtgcagcaaggcgttcatcgcggagcaggactcgtatgtgttctctaggcatgacctatacaaggacttggggaatctgccgatggtgctcgactggtatatacagggtggcaactgcaaggaggcaagccgcagtcgtcaaacctacatgtgcaaggagaacagttattgctatgaggtggaagatggagctggatatcgctgcaattgctctggaggttacactggcaacccgtacattggatgtgttggtgagaaatcctcaattcatgtgtttggttgccaatatagtattactggctagcatgccttattctaatatccttttttgctttgtttcctacttttgactacaagatatcgacgaatgcaacgacgggaataactatccatgcacccacaagtgcatcaacatagctggtggttacaattgtacatgcccaatgggcatgacaggagatggcaagaagcaaggcattgggtgtaaaagagatacaacaatgttgtctactgtaggcaagtctcttgcaatctttaatattattctctctttttcgaaattttatcaaccagaacaaacaattgattactacatgaagtagtagtaacttcaagattcaaatacccatttcaggtggaagccttggtttgatggctgttctcattgttcttggcttttggacttactggatagtgaagaagaggaggcttgcaaagcagaaacaacgatacttcttgcaaaatggtggtttgttattgcagcagcagatattcacccaccaagcacctgcaaggatattcaccaccagtgagctcgaagatgcaacaaacaacttcagcgatgaccgtattgttggtcgaggtggatatggtacagtgtataaagggatactatctgatcaaaccattgtggctatcaagaagtcaaagcttgtggatcagagccaaatggagcaatttatcaacgagttgatagttctttcacagattgatcacaaaaatgtggtcaagatattgggctgttgtcttgagactgaagtgcccttactggtttatgaatttatatcgaatggagctctgttccaccaacttcataatacaaatttggtaccaatttcatgggagcatcgtcttaggatagcaactgaaactgcatcagctcttgcaaatcttcacttagcaagaaaggtgccaatcatccatcgtgatgtcaagtctgccaatatactgattgatgagaactacaccgcgaaggtatcagactttggcgcttcaaggctagtcccttccaatcagacacatgtaacaaccttagtccaaggaacattaggatacttggaccctgagtacttttacacaagccaactaactgacaagagcgatgtatatagcttcggtgtggttcttgttgagctattaactagacaaaaaccgatatcttatcataggcaagaggaagggataaatctagcttcacatttcacggcgcttgcccagcagaaccgactacaggagattgtggactgcgtcgtggtgaaggaagctggaatgaggcatgttaatgtggtgtcgcatttgattctgaagtgtttgaagcttaaaggggaagagaggccaaggatggtagaagtagcaattgaacttgaagcgctcagaaggttaatgaaacaacacctgtccctgaaaagtgaaaaggctttgagagagcttatggagcagcaatctgctgaagattgccaagagatgcagttgcttcaagaggagagcggccaggaaaaaatgagtaacattgagccgctgaagttgtaccacagggacagtgcctcggataaatgcatggagagcagtccacttctatcaatggacctcccatggtagtgtacaatatatcaactgaggtggtgtttgaatctcctgaaaatgaaaacaaagataaaaattaagtgttttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0598900, RefSeq:Os04g0598900